Information report for Sevir.8G096700.1.p
Gene Details
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Functional Annotation
- TrEMBL: A0A368S7M2 — A0A368S7M2_SETIT; Uncharacterized protein
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00018843001, GSBRNA2T00046227001, GSBRNA2T00039071001
- Brassica oleracea: XP_013595850.1, XP_013588994.1
- Brassica rapa: XP_009101805.1
- Nicotiana benthamiana: Niben101Scf01700g00004.1
- Oryza sativa: ZFP245
- Panicum virgatum: Pavir.8NG183100.1.p, Pavir.8KG157900.1.p
- Raphanus raphanistrum: RrC9752_p1
- Setaria italica: Seita.8G094400.1.p, Seita.7G312600.1.p
- Solanum tuberosum: PGSC0003DMP400020499, PGSC0003DMP400063571
- Zea mays: GRMZM2G359589_P01
Sequences
CDS Sequence:
- >Sevir.8G096700.1.p|Setaria_viridis|C2H2|Sevir.8G096700.1.p
ATGTCACCAAGTGAGGAGCCGCCGCCGCCTCCGCCGCCGCCACCACCACCACCGCCACCAAAGGGTGAATCAATGGGGCGCCGGTTGATTGTCCGCATCCGTCTCCGCACCATGCAGCTGCCCGACCAAGAAGAGGGTAGTGTTGTAGGAGCCAACGAGAATGCGGCTGCTCTCCAGAGCTATGGATCTGAATCACCACGGTCGCCGCATGAGAAACTCCCCGAACGCCCCCATGAGGGCGAAGCTTCTAGAAGCAGGGGTGTGGAGCCTCCTTCCGAACCTTTGGCGGGCGGTCATGGGAGGGAGGAGGCAGCCGTCCAGCAGCATGGTTCACCATCGCTGTGTTCGCGTGAGGCATATTGCCTCATTCGAGATGCGGCAAGAGCCGGTCTTGGCGTCGTCGCTGCGGAGCCGTACCTGTGCACCAACTGCACCATGACCTTTGGTCGAGAGAAGAAGATGCAAGGGCACAAGAGATCTGGCAGATCCAGCCAGGTCGCCGGTCATGGAGTTCCGGCGCCGGGGGACTCAAGTCGGTGTGGGCGGCAGGGAGGACCTCGTGTCCTTGCGCACCCACCAGGCGGGCCACGTGTTTGGGGCGCACAACGACGGCCACGTCAACCAAGCTATCGTCCCCGCAGCCGAGAATCCAGAGCCATAGAGGATGACGACAGTGACAATGACAACGCCATGAACGTCACTGGCGGTGACGCTGGGAACGCCAATCCTGTCATCGCCGTCATGGGGTTTGGTCCAACTGCAAGCTCAGCTCCTGATGTGGCGCCAGTGCTGCCAATGGCACGAGCTCCTGCAGCTGCCACCGAGGTTATAGTCATAGACGACGACAGCAGCGACGACGACAATGTTGTCAACGGCACAAATGCGGCAGCTGTTCTGCCACTGCCACGAGCTCCTGCCGCTCCAACTGCAGCTGATACGGTAAAGGGGAAGAACGCCTTACATGAAGGCGGAGCTTGCTATAGCAATGGTGGCCACGGCAAAGCTGTGGCTGGCTACAGCAGTGCCGGCCACAGCAAGGCTGCAGCTGGCTACAGCAGTGGCGGTTATGGCTATGGCTACGGCAAAGCTATTGCCATTGGAGGTCAGAGCAAGAGAGGCCCGCGCAGACCCTACAGCTGTGCGGATTGCGGCGAGACGTTCTACACCCCTCAGGCGCTGGGAGGCCACGCCAATGGTCACAGGTCCAAGGAGAAGAAGAGCATGGTGATGCCGAACCTCCAGAGCCCCTCGGCATGCAGGAGCGGTCGGCACGTGTGCCCGGTGTGCGACATCGTGTTCTCGACCGGGCAGGCGCTGGGTTGGCACAGGAAGAGGGTGCACTATGGTGGCCTGGTGATCGGTTCGGCCAGCAACACCAGCAGCTCCTCCACACCTCGCCCTCCGGCGAATGCTTTGGAGCCCTCGGAAGCGACAGCGATGAACAGCAATGCTGCGGCCGTCCATGGCACTGCCAACGCCATGCGCTGCAGGTCGTTTTTTCCTGATTCTGCTGGAAGCGCCATCCTTGCACTTCCAGCGCTGAATCCAGTGCAACGGATGGCAATGACCAGCAATCCTGCTGTGCCTGGTCTTGTCTCAGCTGCTACTGCTGCCACTGGCTCATGGTCATGGTCACTCCCTGCAACGACCAGCAGCTTCCTTCCTGCAATCCCCTTGCAGAATCATGGGGAGAATCCACCAGAAGAGATTGCGGTGGCGCCTGGCAACCGTGCAGGCCGCACCATCCGCGCATTCTCCTCGCAGGATCAAGAGGAGAATCCACCACAAGAGTTGGCAATGGCGCCGGGTAATGGTGAGCATCGCTCCATCCGTCCCTTCGGCTCCGACACCTCTCCTCAATTCCCCTCGCAGAATCAAGAGTATCCACCAGAAGAGAGAGCTGTGGCAACTGGCAACGATGAGCAACGTTCCATCTGTCTCCTCGGCATCGATGTCTCTCCTGCACTTCCCTCCCAGAATCAAGAGGAGAACCCACCACAGGAGATAGTGCCTGGCAACCGCGGACTTGGTACCATCCTTCTCTTTGGCGTCAACTTGGCTGAAGGTCCGAAAGAACCAAAGAAGTAG
Protein Sequence:
- >Sevir.8G096700.1.p|Setaria_viridis|C2H2|Sevir.8G096700.1.p
MSPSEEPPPPPPPPPPPPPPKGESMGRRLIVRIRLRTMQLPDQEEGSVVGANENAAALQSYGSESPRSPHEKLPERPHEGEASRSRGVEPPSEPLAGGHGREEAAVQQHGSPSLCSREAYCLIRDAARAGLGVVAAEPYLCTNCTMTFGREKKMQGHKRSGRSSQVAGHGVPAPGDSSRCGRQGGPRVLAHPPGGPRVWGAQRRPRQPSYRPRSRESRAIEDDDSDNDNAMNVTGGDAGNANPVIAVMGFGPTASSAPDVAPVLPMARAPAAATEVIVIDDDSSDDDNVVNGTNAAAVLPLPRAPAAPTAADTVKGKNALHEGGACYSNGGHGKAVAGYSSAGHSKAAAGYSSGGYGYGYGKAIAIGGQSKRGPRRPYSCADCGETFYTPQALGGHANGHRSKEKKSMVMPNLQSPSACRSGRHVCPVCDIVFSTGQALGWHRKRVHYGGLVIGSASNTSSSSTPRPPANALEPSEATAMNSNAAAVHGTANAMRCRSFFPDSAGSAILALPALNPVQRMAMTSNPAVPGLVSAATAATGSWSWSLPATTSSFLPAIPLQNHGENPPEEIAVAPGNRAGRTIRAFSSQDQEENPPQELAMAPGNGEHRSIRPFGSDTSPQFPSQNQEYPPEERAVATGNDEQRSICLLGIDVSPALPSQNQEENPPQEIVPGNRGLGTILLFGVNLAEGPKEPKK*