Information report for Zm00001eb169150
Gene Details
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Functional Annotation
- Refseq: XP_021317664.1 — uncharacterized protein LOC110435890
- TrEMBL: A0A1D6PSI4 — A0A1D6PSI4_MAIZE; Uncharacterized protein
- STRING: Zm00001eb169150 — (Zea mays)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.8NG183100.1.p, Pavir.8KG157900.1.p
- Setaria italica: Seita.8G094400.1.p
- Setaria viridis: Sevir.8G096700.1.p
Sequences
CDS Sequence:
- >Zm00001eb169150|Zea_mays|C2H2|Zm00001eb169150
ATGCACGACGAAGAAGATGGCGGTCCCATAGGAGCAAGCGATGTGGAAGCTATTGCGCTAAGCCGTGGATCACCACGCGCAACGCGCCACGGGCACTCCAGATCCGGCTGCTGTCTTGAGGGTAAAGCTTCTAGCTATGGGGAAACTAAGATGCCGGTGGGTTGTCCTGGTAGCGACGAGGTAACTACTACCAAGCAGTGTGGTTTGCCACCACGGTGCTCACGTGAGGTGGGCAGGCTCTTTCGTGACAACAGGTTAGTTGGCCTCGACACCGATGCTCCGGTGAACGACCGGCCTTACGCTTGCGTCAATTGTTCCATGACCTTTGGTCGGGAGACGACGCTGTGTGGGCACATGAGGTCGCACATGCGCGACCACCTCTCATCCGGCTCTGAGTCTGAGGAGGACACACCGCCCACGCCAAAGAGGAGAAGGAAGAAGCGGAAGTCAAAGCAGCTGACGCCCCTGGTCACGACATGGGGCAATACCGAGCGTCGCAACGGGAGCCCTAGACACGCCACTACCCGTGAAGAACAACCACCGCCAGATAGGTCGCAGCAGGTCGCGCAGATCCATCAGGACCTGATGGCCACACAGCTTGGGGTGACCGACGACGCTGTCGTCGTCGTCTCACATGCCGAGAACCTCGAGGTCAAAGTTTCTGGATCTGAGTCTAATATGGTTGTTCCCAACATAGGGGTCACCATGCACGGCAGCAACGAGGTCACAGAGAACAGCCGCAGCAACCAGCATGACAATTCTGTGATCATCATCATCGACGATGACAATGACGACGACGCAAATCCTGTCATCACCGTCGCAGGGTCTCCTGGAGCTCCTGGTCTAGCTCCTGATGCAGCGGCAGCTGTGGCCACGGCACCAGCTCTTGCGGTGGCCATGGTGGCAACTCCTACAGTGCCTGCTGCACCTCACGTCGCAGCATCTATGACCATTCAAGGAGCTCCTGCATCTGATCATCGGCCGGTGAAGGGGAACAACGGCGGCTTTGGTGAAGGTGCTCGCTATGGATATGGTGGTGGCAATTCTCTCACCGCTGGCGCTGGCTATGACACCGTCGTCGACAATGGAAAAGCTATTGCTGGCTATAGCAATAATGCCTGCTATGGAGGTAGACGTGTTTCTAGCTATAGCGGCCGTGGCTACGGCGAAGGTCTTGACGGCTCTAGCATCGGCAGCCACAACTACAGCACATTTACTACCCCAGCTGGAGGTGAGAGCAAGGAAGCAGCAGCCTGTGGCAAGGTGTACGGTTGCCCAGACCCAGAGTGTAAGAACAGCAACACTCGTCGTCACAGCAGGATCATGGAGAAGAAAGACAAGGCGAAGCTAGTCTTGCATAGTGGTCGTACTGGTACGCACAAGTGCAAAGTTGCTGCTGCTGATGACCCTTTCAAAACCATCGAAGCGACAGGCATCAACGGCATCGGCGGAGCTGTGGATGACCCTTACAATCTCAGGGGCTGGAGGTTCCCAGCTGGAAGCAGAAGCACCGTCCTCCCGCGTCTCGCCACAAGGCCGCCGGCGCAACAGCCACCTCAAGGAACAGTGGCTATGGCTGCCGCCAATAATCCTGTGACTGGTCGTCATTTCTCAGCTGGCAGCAACACCTTCACTGGCTGGTCACTCCCTCCAACTACCAGCAGCATCCTTCCGGCAGTCCCCTTGCACAATCAAGAACAGAATCTACTGGAACAGATAGCAGCAGCAGGACACCGCAGCATCAATCCTGCGTTGTTCTCATTCTCAAGGAGACAAGAGGAAAACCCACTACTAGAAGGTATAGCAGTGGTGCCTAGCAATGCAATTGCCAGCAGTTCCTCCACTCCTCGCCCTGGCGTTGCTGCCGCTACTCATCAGCCCTCCGAAGCTATAGGGATCAACAGCTACTTTCCATCCATTGTTGATGCCCCTGCCAATACCATGGGCCGTCGCTTGCCATTCTTCCTAGCTGGAACTGGAGCTGGAAGAAGCGACATCCATGCACTCCCTGTGTGCAGGCCGGTGCGCCACCCAGCTCAAGTGATGGCAACGGGTGGCGATCCTTTGACTGGTCATTTCCCAGCTGCCATCTCTGCCACTGGCTGGTCATTACCTGCAACTACCAGCAGCGGCCTTCCGGCATTTCCCTTGCAGAATCCGCCAGAACAGATAGCAGCAGTGGTTCCTAGCAACGCCATTGGCAGAAGCTCCTCCACTCGTCGCCCTGGCGTCCCTGCTACTACTGAGCCCTCCGAAGCTATAGCAGGGATCATCAACAGCAACGTTGCAGCCATTGATGCTCTTACCAACACCATGCGCGGCTTGCCATTCTTCCTAGCTGGCAGAAGCGCCATCCATGCACCTCCTGTGTCTAGGATGGCGCACCGGCCATCTCAAGGGATGGGGGCTATGGTTGGCAATCCTGTGACTGGTCATTTCCCACCATCTATGGCTGCCAATGGCTGGCCATTCCCTGCAACTACCAGCAGCAGCATCCTTCCTGCGATTCCACCGCAGAATCAAGAACATCGTCCACCACAAGGGAGACTGGTGGTGCCTGCGAATGGTGAGCATCCCTCCACCCTTCTCTTTGGCTCCAACACCTTTCCTACTCTCCCCTCGCAGAATCAAGCGGAGAATCCACCAGCAGAGGAGACAGTGCCTGGCAATAACGGAGGTCGCGCCATTCTTCTCTTTGGCATCAACATCGCTGAAGGAGATACCAACTTTTACATTGCGGAAGCTTTATGTGCTTTAGAAGCTTTTGCTGCTACCGATTAA
Protein Sequence:
- >Zm00001eb169150|Zea_mays|C2H2|Zm00001eb169150
MHDEEDGGPIGASDVEAIALSRGSPRATRHGHSRSGCCLEGKASSYGETKMPVGCPGSDEVTTTKQCGLPPRCSREVGRLFRDNRLVGLDTDAPVNDRPYACVNCSMTFGRETTLCGHMRSHMRDHLSSGSESEEDTPPTPKRRRKKRKSKQLTPLVTTWGNTERRNGSPRHATTREEQPPPDRSQQVAQIHQDLMATQLGVTDDAVVVVSHAENLEVKVSGSESNMVVPNIGVTMHGSNEVTENSRSNQHDNSVIIIIDDDNDDDANPVITVAGSPGAPGLAPDAAAAVATAPALAVAMVATPTVPAAPHVAASMTIQGAPASDHRPVKGNNGGFGEGARYGYGGGNSLTAGAGYDTVVDNGKAIAGYSNNACYGGRRVSSYSGRGYGEGLDGSSIGSHNYSTFTTPAGGESKEAAACGKVYGCPDPECKNSNTRRHSRIMEKKDKAKLVLHSGRTGTHKCKVAAADDPFKTIEATGINGIGGAVDDPYNLRGWRFPAGSRSTVLPRLATRPPAQQPPQGTVAMAAANNPVTGRHFSAGSNTFTGWSLPPTTSSILPAVPLHNQEQNLLEQIAAAGHRSINPALFSFSRRQEENPLLEGIAVVPSNAIASSSSTPRPGVAAATHQPSEAIGINSYFPSIVDAPANTMGRRLPFFLAGTGAGRSDIHALPVCRPVRHPAQVMATGGDPLTGHFPAAISATGWSLPATTSSGLPAFPLQNPPEQIAAVVPSNAIGRSSSTRRPGVPATTEPSEAIAGIINSNVAAIDALTNTMRGLPFFLAGRSAIHAPPVSRMAHRPSQGMGAMVGNPVTGHFPPSMAANGWPFPATTSSSILPAIPPQNQEHRPPQGRLVVPANGEHPSTLLFGSNTFPTLPSQNQAENPPAEETVPGNNGGRAILLFGINIAEGDTNFYIAEALCALEAFAATD