Information report for 71079
Gene Details
Functional Annotation
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv3_055090_xdwj.t1
- Daucus carota: DCAR_029574
- Gossypium arboreum: Cotton_A_01293_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G2312, Gh_D12G2446
- Lactuca sativa: Lsa009785
- Panicum virgatum: Pavir.2NG238700.2.p, Pavir.2NG238700.1.p
- Setaria italica: Seita.2G135900.1.p, Seita.2G135900.2.p
- Setaria viridis: Sevir.2G141200.1.p, Sevir.2G141200.2.p
- Solanum lycopersicum: Solyc03g025440.2.1
- Solanum melongena: Sme2.5_04747.1_g00001.1
- Solanum tuberosum: PGSC0003DMP400027705
- Triticum aestivum: Traes_4AL_784CF40E5.1
- Vitis vinifera: GSVIVT01028908001
- Zea mays: GRMZM2G142502_P03, GRMZM2G142502_P02
Sequences
CDS Sequence:
- >71079|Micromonas_pusilla_CCMP1545|C2H2|71079
ATGGATGATGGAAATTCTGATGAGAGTTCTTCAAAACTTTCAGATAATGTTTTATTTCCAAATCAAGAATCATGTAGCAATTTTCAAGCTTCAAAAACATGTACACACACTCACACATGTAATACTTTAGATGCTATTCACACACACACATGCTATCACACACACACTCAACTTTTTGACACAAATTCAATGCCAAAAAGGGCTTCTGGCAATAAAGAAGCTGTTAAAAAGTATAGAGAGAAGAAGAAAGCAGAAACAGCTTATTTGGAAGAAGAAGTTAAGAAATTGCGTTTGGTTAATCAACAATTGGTTAGGAAACTACAAGGAAAACAACTACTTGAAGCAGAGTTGTTAAGGTTAAGGAAGATTTTGGCTCAAGTTAAGGGAAAAATTGATAGTGAAAAATTGCCTACTTTACATCCACATGAATAA ATGGCGACGTCGCCGCCGTCGATCGCGCGCGACACGCCGCCGACGTGGGACGAAGAGCTCGCGCTCGCGGAGACGGACGAATCCAGCGACGACGACGACGAAGAGCAGAGGATCGCGCGGCCGACGACGTGGGTAGGCGGCGGCGCGCGGACGGCCTCGCCGCTCATCACGACCACGTCCCCGACCAACAACAATTCCAATTCCAATTCCTCGGCGACGACGGCGACGACGACGACGATTTCAACCCCGCCGCCGCCCCCGAGCAGCGCGAAGATATGGATCGACGAGATGCGCTTCGTCCCCGCGGACCTCACCGTGCGCGTCGGCACGACCGTCGCGTGGTCGCAGCTCGAGTCGTGCGCGAGCAGGAACTTTCTGGAGATCGTAGACGACGACGAGGCGCCCGTCGCGGCGTCGCCGCCGCTCGCCGCAGGCGAGTCGTGGTCGTGGACGTTCGACGCGTGCGGGTCGTATCACTTCCGGTCGCTCGTGTACGTGTTCATGAAGGGCAGCGTCACGGTCGTGGATGCCGACGTGGCGGGTGACGTGGCGACGACCGGGGGCGCCGACGGGAATAAAGAAGACGCGGGGATCGTCGTCGCCGACGCGTACGACTTCGACGCGTCCCCGGAAGCCGCCGCCGCCGCGCGTCTGGAGAAGCGCGCAGAGAACCGCGAGCGGCGCGTCAGGGCGGCGGAGGAGGAGAAGGCGCGGGCGACGCGCGCGGCGGAGGGGATGATGCGCGAGATCGAGAGCAGAGCGCAGGCGGAGGCGGCGACGCTCTTCTCGTCCGACGACGACGACGACGACGACAACGACGGGAACGGCGGGACCAACGGAACGCCGTACGCCGCGCTCGCGAGCAGCGACGACGAGGAAGCGGAGGAAGCGGCGGCGATGAATACGACGACGACCGAGACGACCGAAATCGAGATCGAGACCGAGGTGGAGACGAAGTGGCGACTCGAGGTGGAGGAGCGCGAGGCGTCGAGGCCGGTGACGGTGTCGCAGCTCCTCGAGCGGACGAACGAGCGGCGGCTGTCGGCGACGCTGAGCGAGACGTCCTCGGGGCGAGGGTCCGGGGCAAACCTACCCGAAACGGCCGGGTTGTCGCCGTTATCTTCTACTTTCTCTTCGTCGTCGATCCCGGTGCCGACGCACCCGACGCCGACGGCGCGGTGCGACAAGTGCAAGAGGGCGTTCGCGTCGACGACGAACTTGGCGCGGCACCGCCAGTCGCATCGGTTCGACGGCAAATCCGGTCGTCACGGCAAACCGTTCGTCCCTCCGGCGACGCGCGAGCAGCTCGCGGCGTGCTGGAGGAACCTCTGCGCGGAGACGAGGCGCGAGGTGTTGGACCTCGGCGTCGGCGGCGAGGCTGGCGTCCTCGTGTTGACCGCGTTCGCGTCGAGAGGCCCCGGGAGTTTCGCGCTCGTCTCCTCCGGGGTGAATAATAAGGATCTTAACGGCGACGTTCCGGCGGACGGCGGGAGCGGCGACGTGCGCGCGAGGTACGCCGCCGCGGGGGACGTCCTCCGGACGTACGTCGACGGCGACGTGAACGTCGCGAAAACGGTCGACGCTGATGCGTTTCTCACCGCGCTTCACGACGCGAGCGAGGGCGGCTTCCTCGGCCCGAAGTGCGCGGTTGACCTGTCGTCGATGGTCAGCGAGCGCAACCTCGAGGCGGCGCTCGCGCTGTTGCTCGAGGAGCGACTCATGCGCGCGTACGTGAAAGAGCGCGGCGCGGAGGCGGAGAGGACGCAGAGGCTTCTCATGGCGGAGCTCGACGAGGCGGCGGCGGATAAAGAGCGGCGCGAGGCGCAGAAGATGAAGATGAAGGCGAAGAAGGCGAAGCAGAAGAGCAGGAAGCGCGCGGGCGCCGGCGCCGGCGCGGGCGCGGGCGCGACGGAGACGGGGGGGAAGTCGACGGCTCACGACAGCGACGGCGACGATGATCGCGGCGGCGACGGCGACGGCGGCGGCGGCGTCGACGACGACGTCGACGAAGACGCGCGCCGCGAGGAGGAGAAGCGGCGGGCGGAGGCGGAGGAACGCGCCGCCGCGTCGGAGCGCGAGCATCGGAGAAACGAAGCCGCGGCGGCGGCGGCGGCGGCGGAGTACGCTGAGCGAGAAGCGCGCGAGGCTGTCGCGCGGGCGCGGCGGCGGGAGAGCGCCGCGAAGGCTGTGGAGGCTGCCGCGGAGACGACGACGGAGGCGGCGGCGGCGTTCGCGGTCGGCGGCGGCGCGCTCGCGGCGAGTCCGTACGGCAAGGGGAGGGCGAAGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGTGCGGNNNNNNNNNNNNNNNNNNNNCCGGGGCCGCCGCCGGGGCCGCCGCCGGTCGCGACCCCAGTCGCGGCGCCGACGACGCCGACGACGTCCAGGCACCCGGTGCACGGCGACATCCCGGTCGCGCAGCTCTGGACGCCGCCGCGCGACTCGGCGCCGCCGACGGCGTCGCCGGCGTACGACGCGCCGCCCGTCGCGATCGCGGTGCCGGCGCCGCCGCCGCCCGGGCCGCCTCCCGCGGCGTACGCTCACCCCGGACCATATCCCCCGCCGGGCGGCGCGTACGGCGTGCCGGCGATGGCGCCGCACGGGCTCCATATGGGCGCGTACGACGCGCTGTACGTGCACCACTACATGCAGGCGATGGCGTCGTTGCATCAACAGCATCTGGCGGGCGGGGCGCTCCCCGCGGAAACCCTGGCGCCGGCTCCGGCGCCGGCGCCGACGACGAGTGGAGCTCCGATCAGTCGGACACGCCGCGACCTTTCGAGGAACGAGACCCGTGACGCGGTCAGAAAGGTCACTCCCCTTGGCGCGCCGCACGCTTCGCGATCGCGACCGAGCGCGTTGACCGGTGACCTGGAGTCCACCCCCCCGCGGACGACTCGGCGATCCGCGCGCGTTACGCGCGACCGACGTCGCGTCGCGCGAAAGAGGACACGTCTCCGCGTGAAAAAGGAATATTTGCAACATTCAGCACATTCACATCACATTCAGCCTCAGCCACACGAGGTACGCCAGCAACCTTTCGTTTCGATTTCTTGTACTTTATTCTTTGGAAAGTTTTTTCTCGCAATGCGCATCTCCGTCTCCGCGGCCGTCTTCTGCGTGCTGTTCGCGCTGCAAGTCTCGCAGGTTCAAGCGTCTCTCGGTCCCGTTCAGCACGACGGTATCAAGATGCCTGCTGGCGTATCAACTCCCAAGTCAATAGGCTTCAGCGAAATTATCGAACGTGGCCCAGACCGGCGCACGATGAGAGATGAAAGCGCATTTGCCACTTGTGTTCTACGAAGGTTTGCTTCGGGAGGGGCATTTGCAGCATCCAATACAGTCATATTTCCTGTAGAGACCATGGGAGGCAACTACTGCTTCGCCTCTGAAGAAGACTGCTGCGAACTCAACGCTGGTCTCGTCGCTGGCATAGTCATCGGCTGCACCGTGGGCCTCACCCTGCTCATCGTCGCGTGCGCGTGGTGCTGCAAGTGCTGCTGTTTCCAACGGAAGGTGCAGCCCGCGCAACCGGGGGTCGTGATGATGCAACCCGCGTACGTGTTGCCGAAATAA
Protein Sequence:
- >71079|Micromonas_pusilla_CCMP1545|C2H2|71079
MATSPPSIARDTPPTWDEELALAETDESSDDDDEEQRIARPTTWVGGGARTASPLITTTSPTNNNSNSNSSATTATTTTISTPPPPPSSAKIWIDEMRFVPADLTVRVGTTVAWSQLESCASRNFLEIVDDDEAPVAASPPLAAGESWSWTFDACGSYHFRSLVYVFMKGSVTVVDADVAGDVATTGGADGNKEDAGIVVADAYDFDASPEAAAAARLEKRAENRERRVRAAEEEKARATRAAEGMMREIESRAQAEAATLFSSDDDDDDDNDGNGGTNGTPYAALASSDDEEAEEAAAMNTTTTETTEIEIETEVETKWRLEVEEREASRPVTVSQLLERTNERRLSATLSETSSGRGSGANLPETAGLSPLSSTFSSSSIPVPTHPTPTARCDKCKRAFASTTNLARHRQSHRFDGKSGRHGKPFVPPATREQLAACWRNLCAETRREVLDLGVGGEAGVLVLTAFASRGPGSFALVSSGVNNKDLNGDVPADGGSGDVRARYAAAGDVLRTYVDGDVNVAKTVDADAFLTALHDASEGGFLGPKCAVDLSSMVSERNLEAALALLLEERLMRAYVKERGAEAERTQRLLMAELDEAAADKERREAQKMKMKAKKAKQKSRKRAGAGAGAGAGATETGGKSTAHDSDGDDDRGGDGDGGGGVDDDVDEDARREEEKRRAEAEERAAASEREHRRNEAAAAAAAAEYAEREAREAVARARRRESAAKAVEAAAETTTEAAAAFAVGGGALAASPYGKGRAKTAAAAAAAAAVGAXXXXXXXPGPPPGPPPVATPVAAPTTPTTSRHPVHGDIPVAQLWTPPRDSAPPTASPAYDAPPVAIAVPAPPPPGPPPAAYAHPGPYPPPGGAYGVPAMAPHGLHMGAYDALYVHHYMQAMASLHQQHLAGGALPAETLAPAPAPAPTTSGAPISRTRRDLSRNETRDAVRKVTPLGAPHASRSRPSALTGDLESTPPRTTRRSARVTRDRRRVARKRTRLRVKKEYLQHSAHSHHIQPQPHEVRQQPFVSISCTLFFGKFFLAMRISVSAAVFCVLFALQVSQVQASLGPVQHDGIKMPAGVSTPKSIGFSEIIERGPDRRTMRDESAFATCVLRRFASGGAFAASNTVIFPVETMGGNYCFASEEDCCELNAGLVAGIVIGCTVGLTLLIVACAWCCKCCCFQRKVQPAQPGVVMMQPAYVLPK*