Information report for GSVIVT01028908001
Gene Details
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Functional Annotation
- Refseq: XP_002272128.1 — PREDICTED: uncharacterized protein LOC100262848 isoform X1
- Refseq: XP_010662709.1 — PREDICTED: uncharacterized protein LOC100262848 isoform X1
- TrEMBL: E0CUZ7 — E0CUZ7_VITVI; Uncharacterized protein
- STRING: VIT_16s0050g00700.t01 — (Vitis vinifera)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn081281
- Gossypium arboreum: Cotton_A_01293_BGI-A2_v1.0, Cotton_A_36602_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D12G2446, Gh_A12G2312, Gh_A08G2455, Gh_D08G1069
- Malus domestica: MDP0000291317
- Manihot esculenta: Manes.06G149800.1.p, Manes.14G024700.1.p
- Prunus mume: XP_008234210.1
- Prunus persica: Prupe.2G297500.1.p
- Pyrus bretschneideri: Pbr035354.1, Pbr031344.1
- Ricinus communis: 30169.m006244
- Ziziphus jujuba: XP_015888867.1, XP_015888864.1, XP_015888857.1, XP_015888868.1
Sequences
CDS Sequence:
- >GSVIVT01028908001|Vitis_vinifera|C2H2|GSVIVT01028908001
ATGCCAGTTGCAAGACTCAAGGATTCTAGTACTTCAGATGCAATGAAATCAGAAGATGGAAATGATTCTCTGGACAGTTTCATCAGACAAGCAATAGGAAAAGAGCCTTTTCTTTCTTTCTCAAGGGCCGGGGAAAGTCCAGTACAGTGGATCCAATTACTCCATGCTTTAGATCAGCAAGATCTCCCTGGTTGGCCATTGCTTTCTCCTTTGAAGGTACAAATGCAGAAGTGTGAGAAGTGTTCCAAAGAATTTTGTTCACCCATTAATTACCGAAGACATATACGTGTACACCGTCGGACTTTGAACATTGATAAGGATTCAACTAAAAACAGGAATCTATTAGGAGCATTTTGGGATAAGCTCTCTGTGGATGAGGCTAAGGAAGTTGTATCATTCAAGAATGTTTCACTCGAGGAAGTTTCTGGGTCTTCAATTGTGAGGGCATTGACATCATTTGTCCGGAAGCCAGGATTTTCTTCTCTTCCACAAGTATATATGAAGGCTGGTTCTGCCCTTTTGGATATTGTCCAATCTAGACCTTCCAGGTTCCCAATATCCTCCCAGGATTTATTCAGTATCCTTGATGATGCAAGTGAAAAAACATTTTTATGTGCTGGCACAGCTGAATCAATGCAAAAATATGTTTTTGATGGGGAAGCTGGGAAGATTGGTTTGGAGATGAAAAACTTAGTTGCTTGCACCTGCTTCCTGGTAGAACAGAAACTGGTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCTTTGAGGTGCCACAAGTTGCTTGTGGAAGAGGAAGAAGCTGCTCAGAAAAGGCAAGCCGAGCTGTTGGAGAGGAGAAGGCAGAAAAAGCTTAGGCAGAAAGAACAGAAAGCAAAGGAGCAGACCAATGGGGAGAAGACAGACTCTAAGGAGGACATCACCAACATGTCAGAGGTTGTGCCTACTGCAGAAATTTCCAGTCATGTGGCTACAACCGTTTGTGAGACAGCCACACAATCAGATGCCATTTCTCCATCAGTTGAACCCATAGAACTTTCAAACACTGAAAAAGATAGTGCAAATACCACAGCTCAATCTGGAATTGGTGCTGGATATTCTGAAGCAGGCACTTCTCAGAATGTTGAACGCCGAGTTGCATACGGAGTTGGTTGTCGGCATTTAATTAAAATGCGAAGACAGGTGCCAAAATCACAGAGAGGCGCACCAAATGGCTTCCATGCAGATCAGAATCCTCAGATATCAAAGTTTGGAGCCATACAAAAGCATGCCACCCACAGGGATCCCAGGGCTGTTCCAGTAGTCAACAACAATAAAGTTTGGACCCGTAAACCTAAATCAGAAAATGAAGGGGAAAGCTTGAAAAGCAGATTACAGAGAGAGGTACTAAACCAACCAGATCAAAATATGAACTGTGAGGTGATGATAGGTTCTATCTCTGTCACACTTGGAAATTCTAGTGATCAGCTACAAGGTGAGAATCTAGTTGTAGCCCGAGATAGTTGCACCTCACAGCATCCAATGCCAAAGAAAACCTATATTCAGGAGAAGCCCATTAAACCAGATTCTGTTTCTATGAAGCCAGATCCAGCTCAGAGTGGCACAAATAGGTCAACAGTTAAACTTTGGAGGCCTGTGAACCGACAGGAAACTGGAGGTTCAATGCCAGTTCAAAGTGGCAATAGAGAATCTGAAGCTGGTGTGGCTACTGAGAAGGGAAATGACCTAACCCTGTCCGATGAAAGCTGCATCAGATCATGTGCTATGGACATTAATAGTAGCACAGGTGTGAACAATTTCGCTTCACAGATGAAGGAAAGACCATCTGTAGGAGGTTTTCAGTTCTCCAGCTGTGCTGCAGAAGCTTTTCTCGCACAGAGATGGAAGGAGGCTATTGCTTCAGACCATGTGAAACTGGTCATATTTCCAGAATCCGAGCCTCCAGGATGCACAGAACCAGCATCAGACAATCTTGTCAAGACACAGAACAACCTTGCTAATGCCGGGGCTCTCGAGTCTTCAACCTCGGCAACTGTCAAAGTCAAGTTCAGACCAATGTCCGAAAAGGGAATTAAGCTAAAGTACATTCCAAAAAAGAGAACCAATACCTGA
Protein Sequence:
- >GSVIVT01028908001|Vitis_vinifera|C2H2|GSVIVT01028908001
MPVARLKDSSTSDAMKSEDGNDSLDSFIRQAIGKEPFLSFSRAGESPVQWIQLLHALDQQDLPGWPLLSPLKVQMQKCEKCSKEFCSPINYRRHIRVHRRTLNIDKDSTKNRNLLGAFWDKLSVDEAKEVVSFKNVSLEEVSGSSIVRALTSFVRKPGFSSLPQVYMKAGSALLDIVQSRPSRFPISSQDLFSILDDASEKTFLCAGTAESMQKYVFDGEAGKIGLEMKNLVACTCFLVEQKLVKAWLADKDAEALRCHKLLVEEEEAAQKRQAELLERRRQKKLRQKEQKAKEQTNGEKTDSKEDITNMSEVVPTAEISSHVATTVCETATQSDAISPSVEPIELSNTEKDSANTTAQSGIGAGYSEAGTSQNVERRVAYGVGCRHLIKMRRQVPKSQRGAPNGFHADQNPQISKFGAIQKHATHRDPRAVPVVNNNKVWTRKPKSENEGESLKSRLQREVLNQPDQNMNCEVMIGSISVTLGNSSDQLQGENLVVARDSCTSQHPMPKKTYIQEKPIKPDSVSMKPDPAQSGTNRSTVKLWRPVNRQETGGSMPVQSGNRESEAGVATEKGNDLTLSDESCIRSCAMDINSSTGVNNFASQMKERPSVGGFQFSSCAAEAFLAQRWKEAIASDHVKLVIFPESEPPGCTEPASDNLVKTQNNLANAGALESSTSATVKVKFRPMSEKGIKLKYIPKKRTNT*