Information report for DCAR_029574
Gene Details
|
|
Functional Annotation
- Refseq: XP_017223908.1 — PREDICTED: uncharacterized protein LOC108200310
- TrEMBL: A0A175YFK3 — A0A175YFK3_DAUCS; Uncharacterized protein
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn081281
- Glycine max: Glyma.10G233400.2.p, Glyma.10G233400.1.p
- Gossypium arboreum: Cotton_A_01293_BGI-A2_v1.0, Cotton_A_36602_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G2312, Gh_D12G2446, Gh_A08G2455
- Manihot esculenta: Manes.06G149800.1.p, Manes.14G024700.1.p
- Populus trichocarpa: Potri.015G146300.2, Potri.015G146300.1
- Prunus mume: XP_008234210.1
- Prunus persica: Prupe.2G297500.1.p
- Ricinus communis: 30169.m006244
- Sesamum indicum: XP_011076143.1
- Vitis vinifera: GSVIVT01028908001
- Ziziphus jujuba: XP_015888868.1, XP_015888867.1, XP_015888864.1, XP_015888857.1
Sequences
CDS Sequence:
- >DCAR_029574|Daucus_carota|C2H2|DCAR_029574
ATGATTGTGGGAGTGGGGAATGATGTGCAGGATGCTCTAGTCAGACAGACGATTGGAATAGGGCCTTATCTTTCTTTTCCAAGGGTAAATGATGTCCCAATGCAGTGGGTCCAGTTGCTTAATGGTTTTGACCAACAAGAGCTATATGGGTGGCCCATGCTAACTCCATTGAAGATTCAGATGCAGAAGTGTGACAAATGTTCCTTGGAATTCTGTTCTACTGTTAACTACCGCAGGCATATACGTGTGCACAGACGTTTGAAAGTTGATAAGGATTCTTACAAGAGCAGGGATTCATTGGGAGCATTCTGGGACAAGGTCTCCCTGGATGAGGCGAAAAACATATTATCATTTAAGGATGTGACCCTAGAGGGACTTCCTGGCTCCTCAATAATTAAAGCATTGGCCTCATTTATTCGCGCTCCTGGGTTTTGTACTCTTCCGCAAGTTTATGTAAAGGCTGGCCTTGTACTCTTGGATGCAATAGAAGCTACACCTTCCAGGCTCCCAATATCCTCCCAGGAGTTGTTTACTGTACTTGATGATGCTAGTGAAAGAACATTCTTAAGTGGTAGCACAGAAGGGTCGGTGCAAAAGTTTATCTTTGATGGGGAGGCCAGAAAAGTTGGCCTTGAGATTAAGAACCTTGTTGCTTGCACCAGCTTCCTGATTGAACAAAGCCTGGTTAAAGCATGGATTGCTGACAAAGATGCTGAAGCCTTGAGGTGCCAAAAGTTACTTGTGGAGGAGGAAGAAGCTGCTCAGAGAAGGCAAGCTGAGCTTTTGGAAAGGAAAAGACTAAGAAAACTTCGGCAGAAGGAACAAAAAACAAAGGGAAGGTCCTGCAAGGAGACGACTGTATTAACTAGTGCTGCTGATATACTTGAGACTGTGCCTTCTGCTGAATCATCCACTCCACCCCAATCTGAAGCTGATTTACATGCTGTATCCAGTCCTCCCCAATCTGAAGTTGATTTACATTCTTCATCCAGTCCACCCCAATCTGAAGGCGATTTACATACTTCATCCAGTCTACCTCATTCTGAAGGTGATTTACATGAATTAGAAGATCATTCCTCAGTTATTGAGCCCGTCCACATCTTCAACAATGAAGTAAATGGACATATTAATATTGAAGGTGGATACAACAGTGAACTTGTGGATATAGGCAGGGCTAAAAATGTTGAATTGCCAGAAAGTCAGGATAGCAATAATCAGCAGATAGTTGACAGTAAATTACAGGTGTTGGAATCAAAAAGCGAACAGAATGCTTGTCATCCTAGTCACAGTCTTGATGTAGTGAAACCAGATCCTATACAAGCACAAGCTCCCCCAAATGATCTAATGGTTGCCCCTGTTAATGGCAGCGATATTAGCACTGGGAAAGGTACAGTAGAAAATGGCCGGGAATGTGTTTCAGCTTTATTGCATGAAAGGGAAATTAGCCAGACAGATCACACGAGTTGTGAGGTGATGATTGGATCCATAACCGTAACTCTGAGAAACTGCACAACACAGAAACAACATGATGATAGTCAGTCTGAATCCCTACATGAAAATTGCAGCATAGATCATGTTACCTGCGAAAATGTTGGTGCTCATTACAAGCAGATAAAACCGGAGTCCACTATGAATAACACACTAATCTCCAATGACAGACATGAGGTGGAATCGGAGTTCGTTGTTCAGACTGGAGTTACAGGAGTGGGTACAATGCCAGACAAATGCTCTCATGCATCCTCTGAAGTTGACAGTGATAGCAAACAAAATGACTTCATACAGCCAGCAAAAGTGGCCCTCTCAAGTCATTCTGCAAGAGCTTTTCTGGCCCATAGATGGAAGGAGGCCATCTCAGAGGACCATGAGACCTTGGTCCTGTCCCAAGAGGCTGAGAGTCAAGGACACTGTGATGCCATTAATGAGTGCTCCGAAGCAGTTTCAACTGTAAAAGCAATAGACAGTGAGGAGCTTAGCGTTCTTGGCCGTGCAAAAAACTTTCTGGATATTGTGGGGGCACCTGAGTATCCAACCAGCAGACCTGTTGATTCCAAGCGTACAAGTAAACCCAGAAAGGGTTACCAAATGAAAGTACAACGCTAA
Protein Sequence:
- >DCAR_029574|Daucus_carota|C2H2|DCAR_029574
MIVGVGNDVQDALVRQTIGIGPYLSFPRVNDVPMQWVQLLNGFDQQELYGWPMLTPLKIQMQKCDKCSLEFCSTVNYRRHIRVHRRLKVDKDSYKSRDSLGAFWDKVSLDEAKNILSFKDVTLEGLPGSSIIKALASFIRAPGFCTLPQVYVKAGLVLLDAIEATPSRLPISSQELFTVLDDASERTFLSGSTEGSVQKFIFDGEARKVGLEIKNLVACTSFLIEQSLVKAWIADKDAEALRCQKLLVEEEEAAQRRQAELLERKRLRKLRQKEQKTKGRSCKETTVLTSAADILETVPSAESSTPPQSEADLHAVSSPPQSEVDLHSSSSPPQSEGDLHTSSSLPHSEGDLHELEDHSSVIEPVHIFNNEVNGHINIEGGYNSELVDIGRAKNVELPESQDSNNQQIVDSKLQVLESKSEQNACHPSHSLDVVKPDPIQAQAPPNDLMVAPVNGSDISTGKGTVENGRECVSALLHEREISQTDHTSCEVMIGSITVTLRNCTTQKQHDDSQSESLHENCSIDHVTCENVGAHYKQIKPESTMNNTLISNDRHEVESEFVVQTGVTGVGTMPDKCSHASSEVDSDSKQNDFIQPAKVALSSHSARAFLAHRWKEAISEDHETLVLSQEAESQGHCDAINECSEAVSTVKAIDSEELSVLGRAKNFLDIVGAPEYPTSRPVDSKRTSKPRKGYQMKVQR*