Information report for Jr11_16350
Gene Details
|
|
Functional Annotation
- Functions in an antagonistic manner to its close homolog FCA. The SSF414N protein variant interacts more strongly with CUL1, a component of the E3 ubiquitination complex, than the SSF414D form, mediating differences in SSF protein degradation and FLC expression.
Homologous
- Actinidia chinensis: CEY00_Acc19694
- Citrullus lanatus: Cla97C10G194400
- Cucumis melo: MELO3C012931, MELO3C021258
- Cucumis sativus: CsGy3G023550
- Glycine max: Glyma.03G220900
- Gossypium hirsutum: Gohir.D07G133600, Gohir.A07G129200
- Lactuca sativa: gene-LSAT_6X261
- Manihot esculenta: MANES_01G230100
- Populus trichocarpa: POPTR_002G192900v3, POPTR_010G147900v3
- Rosa chinensis: RchiOBHm_Chr3g0487191
- Vitis vinifera: VIT_07s0005g01730, VIT_05s0077g00710
Gene Resources
- Pfam: PF00076 PF00397
- UniProt: A0A833UNG0
- EMBL: LIHL02000011
- AlphaFoldDB: A0A833UNG0
- InterPro: IPR000504 , IPR001202 , IPR002156 , IPR012677 , IPR035979 , IPR036020 , IPR036397
- PANTHER: PTHR24012
- SUPFAM: SSF51045 , SSF54928
- PROSITE: PS01159 , PS50020 , PS50102
- Gene3D: 2.20.70.10 , 3.30.420.10 , 3.30.70.330
- CDD: cd00201
Sequences
CDS Sequence
- >Jr11_16350
ATGGAAGGTTTCCATCTATTTCAGTTTGATGTTGCTGTTAGAACACATGGAAGCATCATTGCAACAGTTTGTAGAGCTACAGATAAGAAGCCCATTTTTGTGATAATTAATTTCATACGTAGCACAAACCCAAATGTGGACGAAGCCTCAGCAGCTTTAGAAGGCATTCAAGAAGTTCTTCGCAGAAACTTGAAAAAAATTCACATTGAAAGTGATTCCCAACAAGTAGTAGATGGTCTATTGCTAGAAGCCCCAAACTTGGATTGGGAAATTGAAAACATTGCTGCAAACATGCTACACCTACTGAAATCCATGGAATCTTTGACAGGTTTCGCTAAGGATTTACAGTCAGCGAAGCTGGAGAAGCACAGAGGAGAACGTTTTAATAGCCACCAAGAGCCCCACTATCACCCTCATAACCACCACTCCGACCACCACAATCACCACGACCAGCATTTTAACAATCCTAACTACCATCCCAATCACCATGACCAGCACTTCAACAACCCCAACTATCATCACCACCACCACAATTACCAACCCGATTACCGTCACCACCAGCACCCTGACCACAGCTACAACCACCATCACCACGTGATCGCTGAACCAAACGATTTGTTTGTATCTGGAGGATTTCCGCCAAATGGTGGCGCTGGTGGTGTTGGCGTTGGTGACGGTGCGGGATATGGTCCTGGTTCTGGTTATTTTGGACGAAAAAGGTGGCGGCATCAATCAGCTCGAGGAGCTTCCCCAGATCAAGTGGATGGTGTTGGTCATGTAAAACTTTATGTTGTACCAGTTCCGAGAACAGCAACTGAAGCTGATATTCGACCTGTCTTTGAAGAACATGGAAATGTAGTTGAAGTTGTTATATTAAAGGATAAGAGAACTGGTCAACAGCAAGGAAGTTGTTTTGTGAAGTATGCAACTGTAGATGAAGCTGAAGGGGCGATTAGAGCTTTAAACCATCAATATACTTTTGCTGGGGAGAATGTTCCTCTCTTAGTCAAATATGCTGATAAGGAACGAGAACGTCTTGGGGTACTGGACAAATTATACGTTGGTTGCCTGAACAAAGATGCTTCGGCAAAAGAAATTGAGGAGATATTTTCCCCCTATGGTCTTGTTGAAGATATCTTCATCATGCGAGATGAAATGAAGCAAAGTCGTGGAAGTGGATTCGTTAAATTTTCTCATAGGGATATGGCATTGGCAGCAATAAAAGCATTAAATGGAACCTTCATGATGAGAGGTTGTGATCAGCCATTGATTGTTCGTTTTGCGGATCCTAAGAAACCTAGGACTGGAGAACCAAGGGGCAATCATGGGTTTGCAAGCGCAAATTTTACTCCCTTTTCAAAAGAACCATTTGCTAGGCTAGGACCAAATGTTGGGGATGGAGGGTGTATTTTGCCTAATGCTTCATTTCCTATCCAACCAAATTCCACAAGTTCATTACCTCAAGCGGTTCCGCAAATGATAAACCAAGAACCAGTCATGCAGCAACCATTTCCTTCCCTCCAACAATCAACTTCAGAGTTGTCTCAGATGTCTTTACAACAAACGCAAACTCCACAGACAAGTTCACAATCATCTCAACTAGCCGTCTCTGACGTGCAGAGGCAGTCCCATCAAACTGATAAAGTCGAACAGCAGCTGAGTTTGCAAGTGACTAGTCAGCAGTCTCCACGTACTGGAAGCAATCCTCCAATACTTGCTAGCACTTCTAGCTCACCAGCTGTACCTTTAAGTCCCCAGATAGTGGCTCCTTTAGAGTGTGATTGGAGTGAACATACCTGCCCTGATGGATACAAGTACTATTATAATTGTGTTACTTATGAGAGCAGGTGGGAGAAGCCTGGGGAGTATGCCTCATATGAGCTTCAGTTACAGAAGCAGCAAAGCCAGCAAAATCCTAGCCATCAGCTTCAGTCCTTGTTGCCAGTTCTTTCTACCGAGCGAGTTGTTCAAACAGAACAGGAACTAAATCACATGCAACTGCAGTCAGAATCTAACCCCGTTATCCGTCCAACCTGTGCTTAA
Protein Sequence
- >Jr11_16350
MEGFHLFQFDVAVRTHGSIIATVCRATDKKPIFVIINFIRSTNPNVDEASAALEGIQEVLRRNLKKIHIESDSQQVVDGLLLEAPNLDWEIENIAANMLHLLKSMESLTGFAKDLQSAKLEKHRGERFNSHQEPHYHPHNHHSDHHNHHDQHFNNPNYHPNHHDQHFNNPNYHHHHHNYQPDYRHHQHPDHSYNHHHHVIAEPNDLFVSGGFPPNGGAGGVGVGDGAGYGPGSGYFGRKRWRHQSARGASPDQVDGVGHVKLYVVPVPRTATEADIRPVFEEHGNVVEVVILKDKRTGQQQGSCFVKYATVDEAEGAIRALNHQYTFAGENVPLLVKYADKERERLGVLDKLYVGCLNKDASAKEIEEIFSPYGLVEDIFIMRDEMKQSRGSGFVKFSHRDMALAAIKALNGTFMMRGCDQPLIVRFADPKKPRTGEPRGNHGFASANFTPFSKEPFARLGPNVGDGGCILPNASFPIQPNSTSSLPQAVPQMINQEPVMQQPFPSLQQSTSELSQMSLQQTQTPQTSSQSSQLAVSDVQRQSHQTDKVEQQLSLQVTSQQSPRTGSNPPILASTSSSPAVPLSPQIVAPLECDWSEHTCPDGYKYYYNCVTYESRWEKPGEYASYELQLQKQQSQQNPSHQLQSLLPVLSTERVVQTEQELNHMQLQSESNPVIRPTCA