Information report for gene-LSAT_6X261
Gene Details
|
|
Functional Annotation
- Involved in the promotion of the transition of the vegetative meristem to reproductive development. Four forms of the protein (alpha, beta, delta and gamma) are produced by alternative splicing. Involved in RNA-mediated chromatin silencing. At one point it was believed to act as an abscisic acid receptor but the paper describing that function was retracted.
Homologous
- Actinidia chinensis: CEY00_Acc22900, CEY00_Acc33056
- Brassica napus: BnaC01G0239900ZS, BnaA01G0189100ZS
- Brassica oleracea: Bo1g054910
- Brassica rapa: Bra038446
- Citrullus lanatus: Cla97C06G113890
- Cucumis melo: MELO3C021258
- Juglans regia: Jr12_10140, Jr12_10120, Jr12_10130, Jr12_10090
- Manihot esculenta: MANES_03G206500, MANES_15G001500
- Populus trichocarpa: POPTR_010G147900v3
- Prunus persica: PRUPE_1G114600
- Vitis vinifera: VIT_05s0077g00710
Sequences
CDS Sequence
- >gene-LSAT_6X261
ATGGACAGACATAGAGGAGGAGGAGGAGGAGACAGGTACGGGAATAGTCCTAACGACTCACATCCTTACAGACACCCTAGAGGTGGAGGCGGTGGAGGTCCACCACCTTCACGATCTTCAGATGATATTCCAATGAATCGTCACCATGGAGGTTTCTCTGGAAATCGTCGTCCTTTTGATAACAGTCCACCTCGTTATTCTCTTAGCGGTGGTGGTGGTGGCGGCGGTGGAGGTTTTCACCCGATGGATGGCGACGGTGGTTTCCGGCCTTTAGGTGTGCGTGGTGCTAGGAGTTACAACAATCCTTCTTCAGAGTTCGAGGTACCTCTTTCTGGGCAGAAAAGGTTTAATCCTGATTACGAGGTGCCTATGTCGGGCCAGAAACGTCAATTTCCTTTTCCTGGCCGAGGAGGGCCTTCTCCAGATCGATTTGACGGAGGCAATTTTGAGAAAAGGAACTTCGATGGAGATAATTTTGATAAAAGAAATGTTGATGGAGGCAATTTTGACAAAAAACCTGTTGAAGGAGGCAGCTTCGCCAAGCTTTTTGTTGGTTCTGTTCCCAAGACTGCAACAGAAGAAGATATTCGACCTGTTTTTGAAGAACATGGAAATGTTGTTGAGGTTGCATTGATTAAAGACAAGAGAACAGGGCAACAACAAGGACAAACGGTGTTCGCCTCTGCAGGATGTTGCTTTATTAAATATGCCACATCAGAAGATGCTGACAGGGCAATACGTGCCTTACACAATCAGTACACATTGCCAGGGGGAATGGGTCCCATCCAGGTCAGATATGCTGATGGGGAGCGTGAACGTTTAGGTGCAGTGGAGTTCAAATTGTTTGTTGGCTCATTAAATAAACAAGCAACAGAGAAAGAAGTTGAACAAATTTTTTTGCCTTATGGTCGTGTTGAAGATGTCTATCTCATGCGCGATGAAATGAAACAGAGTCGTGGATGTGGATTTGTTAAATACTCAAATAGAGATGTGGCAATGGCAGCTATTAATGCTCTTAATGGAATTTACACAATGAGAGGTTGTGAACAGCCATTAATTGTTCGATTTGCCGACCCTAAAAGACCTAGACCTGGGGAAACAAGGGGAACTCCTTCATTTGGTGGCCCTGGGTTTGGTCCTCGGATGCAGCCCCCAGGAATTAGACCACCGAATCCTGGGGAGGCAGGAATGCATGGTAACGCATGGCATCCGATGGGCCCAGGTGATGTTGGTGGTTTGAACAACCAAATGGCAGCAGCTAGATCTGGTGATGCAAAAGTGTTGCAGCTTTCATCATCGCCTTTAAAAAAAGCATCAAATCAATCACCACAGCCTCCATCATCCAACACCATAAGACCAATTGGTCAACAACAAGTAGTAGCACCACCCAATTCCAGTGGTCAAACACATTCACATGGCCATGGTTTCAACACAATGTTACCCCAAAATCAGTATCAGGTGCCACCTGTCCACCAGTCAGCTTCACCCCTTGCTCAGATGCTGACTCAGCAAAAACAAACTTTACAGGCGAGTTACCAGTCATCTCAACAAGCCTTCTCACAGCTTCAACAGCAACTGCAACTTATCACACCTCAGCAGAATCTTCAACCTCCTCCTCCTCCTGCTGCTAGATTGCAACAGCCTAATTCTGCTCCGCTCATGCCATCCTTGAAATGTAACTGGACTGAGCACACATCGCCTGATGGATATAAGTACTACTACAATAGTACAACTGGCGAAAGCAAGTGGGAGAAACCGGAGGAATTGGCTTTGTTTGAACAACAACAGAAGCCTCAAGAACAAAAGCAACAACAACAACAACAACAACAACAACAACAGCAAACTCAGTCTCTTTCACACAGTCAAGGTGGTGTTCCACATCAGCAAACTCCAAGTCTTTCACACAATCAAGGACATCAGCAAATGCAAACTCTCACTCAAGGTGTGCCACATCAGCAAACTCAGATTCCACAGTTTCAGAATCAGATGCAACTGCAAGCACAGGGGCGACACCCTCAACACTTGCAAAATCCCACTCACTCTACACCCTATCAAAATGCTGGGGTTGCAGGCCATCAAAATATTCAGGGCTTTGGGTATGGACAAATGCCAGTGGGTGGTGGTTCCATGAATGATTCTGCACAACGCTTTCAGCAGGGGATGCAGGGAGGAGGAGGTCAGGACTGGATGTGGAAAAATAAAACACCAGGTGAACCGGAGCTTGGAACGCGCTTTGGGAAGTGCCGGGAAGCATTGGTGAAGATTTCGGGATGA
Protein Sequence
- >gene-LSAT_6X261
MDRHRGGGGGDRYGNSPNDSHPYRHPRGGGGGGPPPSRSSDDIPMNRHHGGFSGNRRPFDNSPPRYSLSGGGGGGGGGFHPMDGDGGFRPLGVRGARSYNNPSSEFEVPLSGQKRFNPDYEVPMSGQKRQFPFPGRGGPSPDRFDGGNFEKRNFDGDNFDKRNVDGGNFDKKPVEGGSFAKLFVGSVPKTATEEDIRPVFEEHGNVVEVALIKDKRTGQQQGQTVFASAGCCFIKYATSEDADRAIRALHNQYTLPGGMGPIQVRYADGERERLGAVEFKLFVGSLNKQATEKEVEQIFLPYGRVEDVYLMRDEMKQSRGCGFVKYSNRDVAMAAINALNGIYTMRGCEQPLIVRFADPKRPRPGETRGTPSFGGPGFGPRMQPPGIRPPNPGEAGMHGNAWHPMGPGDVGGLNNQMAAARSGDAKVLQLSSSPLKKASNQSPQPPSSNTIRPIGQQQVVAPPNSSGQTHSHGHGFNTMLPQNQYQVPPVHQSASPLAQMLTQQKQTLQASYQSSQQAFSQLQQQLQLITPQQNLQPPPPPAARLQQPNSAPLMPSLKCNWTEHTSPDGYKYYYNSTTGESKWEKPEELALFEQQQKPQEQKQQQQQQQQQQQQTQSLSHSQGGVPHQQTPSLSHNQGHQQMQTLTQGVPHQQTQIPQFQNQMQLQAQGRHPQHLQNPTHSTPYQNAGVAGHQNIQGFGYGQMPVGGGSMNDSAQRFQQGMQGGGGQDWMWKNKTPGEPELGTRFGKCREALVKISG