Information report for Gohir.D07G133600
Gene Details
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Functional Annotation
- Functions in an antagonistic manner to its close homolog FCA. The SSF414N protein variant interacts more strongly with CUL1, a component of the E3 ubiquitination complex, than the SSF414D form, mediating differences in SSF protein degradation and FLC expression.
Homologous
- Actinidia chinensis: CEY00_Acc19694, CEY00_Acc22900
- Brassica napus: BnaC03G0267200ZS
- Brassica oleracea: Bo3g039630
- Citrullus lanatus: Cla97C10G194400
- Cucumis melo: MELO3C012931
- Cucumis sativus: CsGy3G023550
- Glycine max: Glyma.03G220900
- Manihot esculenta: MANES_01G230100
- Populus trichocarpa: POPTR_002G192900v3, POPTR_010G147900v3
- Rosa chinensis: RchiOBHm_Chr3g0487191
Gene Resources
- Pfam: PF00076 PF00397
- UniProt: A0A1U8P2R2
- RefSeq: XP_016745399.1 , XP_016745400.1 , XP_016745401.1
- KEGG: ghi:107954373
- OMA: QETNHDH
- InterPro: IPR000504 , IPR001202 , IPR012677 , IPR035979 , IPR036020
- PANTHER: PTHR24012
- SUPFAM: SSF51045 , SSF54928
- PROSITE: PS01159 , PS50020 , PS50102
- Gene3D: 2.20.70.10 , 3.30.70.330
- OrthoDB: A0A1U8P2R2
- CDD: cd00201
- STRING: 3635.A0A1U8P2R2
Sequences
CDS Sequence
- >Gohir.D07G133600
ATGGAGAGACACAGAGATCGCGGAGAACGTTTCAACGATCACCCGCCCTTAAATCCTACTCCTTGGTATACCAATGCCCAAAGACCTAATTTCCCTCCCGACTACCACCATCAACACCACTATCATCCTTACAACCACCACCATAACCCCCAGCAATTCGACTATTGCCCTACCCAGCAGCAATTCGATCACCGGCCTACCCAACAGCCATTCGAACACCGGCCTACCCAACAGCAATTTGATCACCGGCCTAACCAACAACCATTCGAACACCGGCCTAACCAACAGCCATTCGAGCACCGGCCTAACCAGCAGCAATTCGATCACCGGCCTACCCAGCAGCAATTTGAACACCAATCTAGTCAGCAGCAATTTGAACACCAGCCTGGCAATCAGCATCACTTTGAACGCTTCCCGGAGCAGCACCAGCAACCGATCAGTGAACAAAACGACGCGTTCTGGTCCAACGGTGGCAACGGTCCCAATGCCGGTCGAAAAAGAGGGTTTCACGATTCTGGCCGAGGAGCCTCTCCTGACCATAACGAAGGAAGCAGTCTAGCAAAACTATATATAGCAACGGTTCCAAAAACTGCAACTGAAGAATCCATCCGCTTCATGTTTCAAGAACATGGAAATGTTGTTGAGGTGATTCAACCAAAGGATAAGAAAACTGGTGAACGACATGGATATTGTTTTGTGAAATATGCAATGTTTGAGGAAGCTGAGAGAGCTATTGCAGCTTTAAACAATCGGTATATGTTTCCTGGGGAATCGACTACCATCAAAGTCAGATATGCTGATGCTGAACGAGACCGGCCTGGGCCACTTCCAGACAAATTATATGTGGGTTGCCTAAATAAACAAGCTTCTAAAAGGGAGATTGAAGAAATATTTTCTCACTATGGTCATGTTCTAGACGTCTTCATTATGCGTGACGAGCACAGGGAACACCGCGGATGTGGATTTGTCCAATTTTCTCAAAGAGATATGGCTCAGGCAGCTATCAGAGGATTAAGCGGAATTTTCACCATGAAAGGTTGTGACCAGCCATTGATTGTTCGATCTGCAAATCCAAAGAGACCTCGGAATGGGGAACCAAGAGGCAATTATGCTTTTAATAGCATGCCTTCTGGCCCACATCCTCAAGAATTGGCTATGAGATCTATGCAAAATCTTGGTGATTCTATGGCAGGACATATACCGCCCAATGCATCATATCCCGGGCAGCACATTTCTACAAATCCACAACCACAGGGTGTTTCTCATTGGGCAAACCCTCAAGTTGCAGCATGTCATGTTACTTATCAATCATATCCTCCAGTTCAGCAAGCACACTCACAACCAACTTCACTGCCATCGCAGCAAACACAAACTCTACAGGGAAGTTCTCAATCATCTCACCCAGCTGATTCTGAGCAGAAACAGCAGCCTCTTATACCACCAGCATCACAAGTTCCATCCCAGCAGAATGGGAATGTCCCCAAGCTAGAGTCTCCACAGACTGGAAGTAGCCAGCCAATTGCTGCTACTTCAGTTGTGCCGATAGTCCCCCAAAGTCTTGAGACAGTGGCTTTGCAAGAGTCTGATTGGAGTGAACACACCTGCCCAGAGGGAAACAAGTATTACTATAATTGTGTCACTTGTGAAAGCAGATGGAATAAACCAGAGGAATTTGCATTATTTGAGAAACTGTTGCAGAAGCAACAAAAGGTGCAAAATCCTAGCCAACATATTCAGCCTGACTCAACTGGTCCCTCTGTTAAACAAGTTTCTCAAAGTCAAGAGGTGCAGCTTCAGACCTACCCAATGCATCTGAAACTTGAAGTGGAACAACCTTTTTCAACATTGGGGATGGGCCATATGGAAATCAAGTCAGAAACAAGTCCTGTTGTGGATTTAACTTGTGTTTAA
Protein Sequence
- >Gohir.D07G133600
MERHRDRGERFNDHPPLNPTPWYTNAQRPNFPPDYHHQHHYHPYNHHHNPQQFDYCPTQQQFDHRPTQQPFEHRPTQQQFDHRPNQQPFEHRPNQQPFEHRPNQQQFDHRPTQQQFEHQSSQQQFEHQPGNQHHFERFPEQHQQPISEQNDAFWSNGGNGPNAGRKRGFHDSGRGASPDHNEGSSLAKLYIATVPKTATEESIRFMFQEHGNVVEVIQPKDKKTGERHGYCFVKYAMFEEAERAIAALNNRYMFPGESTTIKVRYADAERDRPGPLPDKLYVGCLNKQASKREIEEIFSHYGHVLDVFIMRDEHREHRGCGFVQFSQRDMAQAAIRGLSGIFTMKGCDQPLIVRSANPKRPRNGEPRGNYAFNSMPSGPHPQELAMRSMQNLGDSMAGHIPPNASYPGQHISTNPQPQGVSHWANPQVAACHVTYQSYPPVQQAHSQPTSLPSQQTQTLQGSSQSSHPADSEQKQQPLIPPASQVPSQQNGNVPKLESPQTGSSQPIAATSVVPIVPQSLETVALQESDWSEHTCPEGNKYYYNCVTCESRWNKPEEFALFEKLLQKQQKVQNPSQHIQPDSTGPSVKQVSQSQEVQLQTYPMHLKLEVEQPFSTLGMGHMEIKSETSPVVDLTCV*