Information report for Gohir.A05G004280
Gene Details
|
|
Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
Homologous
- Citrullus lanatus: Cla97C06G122870
- Glycine max: Glyma.17G062500, Glyma.13G097000
- Juglans regia: Jr11_25360
- Manihot esculenta: MANES_S055500, MANES_06G023300
- Medicago truncatula: Medtr4g127880
- Populus trichocarpa: POPTR_018G091500v3, POPTR_006G167800v3
- Prunus avium: Pav_sc0000359.1_g500.1.mk
- Prunus persica: PRUPE_1G084700
- Rosa chinensis: RchiOBHm_Chr4g0401761
- Vitis vinifera: VIT_11s0052g00830
Gene Resources
- Pfam: PF07227
- UniProt: A0A1U8PFL1
- RefSeq: XP_016749995.1 , XP_016749996.1 , XP_016749997.1 , XP_040968619.1 , XP_040968620.1
- KEGG: ghi:107958674
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: A0A1U8PFL1
- CDD: cd00063 , cd15521
- STRING: 3635.A0A1U8PFL1
Sequences
CDS Sequence
- >Gohir.A05G004280
ATGGATTTCTCTTTTGAGGGAGTTGCACTTGATCCATCAAAATGTAGTAAATTGAGTATGGATGAAAAGAGAGAACTAGTCTATGAATTATCAAAGAGGACAAGTAGGGCCTCCGAAATGCTACAATCATGGAGCCGTCAAGAGATTTTACAAATCCTATGTGCTGAGATGGGGAAAGAAAGGAAATATACTGGCTTGACTAAGCTGAAAATTATAGAAAACCTTTTGAAAATTGTAGCCGAAAAGAATTCAGGGGATCATGAGAGTGTAATGGATCCTGAAATGCAATCCTCCCCAACAATTGGTCAGAGAACAGCCAAAAGGCAGAGGAAAGCTGATCATCCTTGTCGACTGCCTGTTCCTGTCAATGATTTTGCAACCAACAATGGTGGCGATGACATGACCAATGCTATTTATTGTAAAAACTCGGCTTGCAAGGCCAGCTTGAGACAAGAAGATACATTTTGCAAGAGGTGTTCCTGCTGCATTTGTTATAAGTTTGATGACAACAAGGATCCTAGCCTGTGGTTAATATGCAGCTCAGAGCCTCCTTTCCAGGGCAATTCTTGTGGCATGTCATGTCATCTTGAGTGTGCTTTAAAACATGAGAAGTCTGGTTTTCTAAAAGATAAACGGCATGCTGGACTTGATGGGATCTTTTATTGTGTACCATGTGGGAAAGTAAATGATTTGCTTGGGTGCTGGAGAAAACAATTGATGGCTGCAAAAGATACGAGGAGGGTGGACATACTCTGTTATCGTGTCTCTTTAGGCCAAAAACTTCTTAATGGTACTCAAAAGTACCAAAAACTTTCTGAGATCATCGATGAAGCAGTTAAGAAGCTTGAAGCTGAAGTAGGTCCATTAACTGGTGTGCCTGTGAAGATGGGTAGGGGTATCGTCAACAGGCTTTCTTCTGGACCTGAGGTTCAGAAACTATGTTCTTCTGCGGTGGAGTTGCTTGATAAAATGATTTTTGATATGATCTCAAATTCTTTACCAGCAGGTTCAAGCCCAAAACCTCCATCAATTATACGCTTTGAAGATGTTCGACCAACTTCCGTTACTGTGATTGTGGGTTCTGAAGAAACTTTACCAGGCGTTAATGTTGGTTACACTTTGTGGTATCGCAAGGTTCATGATATGGAATATCCTGAAAGACCGATTTGTACCATGTTAGTGCCAAATATGAGGTATGTTGCCACAGGGTTGACTCCAGCTACAGAGTATCGTTTCAAAATTGTCTCCTTTAATGGGACAAGATGGGAAATTCCGATTTCAACAGCCTGTATCGGAGATGAAGTCCCAAGCTGCCCTGTTATGGGAATAAGTCAAAGCCCAACAACCAACTGTAGTAGCCTTTCTAATCCATCTTCTGTGGAGGATGAAACTAATAATGTTACTCTGTATAGTGATCAGAATGATGACCGGGCAGACAATTATCTGACATATTGCAAGGACACTGATAAAATTGTTTCCACAAATCTATGTGAAGGTGGCCCTAACACGGGTGAAGTTTCTCTATTGTGCATGGACCGTGCTATAGTTGGTCCCTTGCTCGATTCAGATGTCGTAAATGTTGAGAAAAAACACACATTGGATGACCCAATTACGGAGGATACAAGCACTGATAATGGTTCTGATGCCCTGGTTCAGATTGGTACTGAGTGCGTGCCGTTTGTGGGTTGTTCAGAAGCTGCCCTTCCTGTTACTCCCTGTAGGATGGAAATAGTTAAAGATGGGCAAGGAAGGAGTGGGAGAAGTAAAACCAGCAACAAGGACCTAGAGAATCAGACCGGGAATGCAGAAGATCACCAAGACGGAAGCTCCTCCAAGAAGAGAAGTGGGGAAAGACGGGATGAAGAATGCGTGGAAAATGGACTCTTAGAAATGGATTTCGAGCATTGTGTGAAGGTAATCAGATGGTTGGAATGTGAAGGACATATCGAGAAGAACTTCAGGCAAAAATTCCTAACCTGGTATAGTTTGAGAGCCACTACACAAGAAGTGAGGGTTGTGAAGGTATTCATGGATATCTTGAATGCAGACCCGGCATCGCTTGCTGAGCAACTGGTGGACACGTTCTCGGATTGTATCTGGAGCAAAAAATCGTCTGTGGTGCCTGCTGGTCTTTGTATGAAGCTTTGGCATTGA
Protein Sequence
- >Gohir.A05G004280
MDFSFEGVALDPSKCSKLSMDEKRELVYELSKRTSRASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVAEKNSGDHESVMDPEMQSSPTIGQRTAKRQRKADHPCRLPVPVNDFATNNGGDDMTNAIYCKNSACKASLRQEDTFCKRCSCCICYKFDDNKDPSLWLICSSEPPFQGNSCGMSCHLECALKHEKSGFLKDKRHAGLDGIFYCVPCGKVNDLLGCWRKQLMAAKDTRRVDILCYRVSLGQKLLNGTQKYQKLSEIIDEAVKKLEAEVGPLTGVPVKMGRGIVNRLSSGPEVQKLCSSAVELLDKMIFDMISNSLPAGSSPKPPSIIRFEDVRPTSVTVIVGSEETLPGVNVGYTLWYRKVHDMEYPERPICTMLVPNMRYVATGLTPATEYRFKIVSFNGTRWEIPISTACIGDEVPSCPVMGISQSPTTNCSSLSNPSSVEDETNNVTLYSDQNDDRADNYLTYCKDTDKIVSTNLCEGGPNTGEVSLLCMDRAIVGPLLDSDVVNVEKKHTLDDPITEDTSTDNGSDALVQIGTECVPFVGCSEAALPVTPCRMEIVKDGQGRSGRSKTSNKDLENQTGNAEDHQDGSSSKKRSGERRDEECVENGLLEMDFEHCVKVIRWLECEGHIEKNFRQKFLTWYSLRATTQEVRVVKVFMDILNADPASLAEQLVDTFSDCIWSKKSSVVPAGLCMKLWH*