Information report for Medtr4g127880
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Glycine max: Glyma.17G062500, Glyma.13G097000
- Gossypium hirsutum: Gohir.D08G030100, Gohir.A08G019500, Gohir.A05G004280
- Juglans regia: Jr11_25360
- Manihot esculenta: MANES_S055500, MANES_06G023300
- Prunus avium: Pav_sc0000359.1_g500.1.mk
- Prunus persica: PRUPE_1G084700
- Rosa chinensis: RchiOBHm_Chr4g0401761
- Vitis vinifera: VIT_11s0052g00830
Gene Resources
- Pfam: PF07227
- UniProt: G7JVD5
- EMBL: CM001220 , PSQE01000004
- AlphaFoldDB: G7JVD5
- KEGG: mtr:11443783
- OMA: AGECEVT
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- OrthoDB: G7JVD5
- CDD: cd15521
- eggNOG: ENOG502QR8D
- STRING: 3880.G7JVD5
Sequences
CDS Sequence
- >Medtr4g127880
ATGGCTACCGATTCGTCTTCCCAAGTTGCTCTTGATCCTTCTAAATTTAGTAAATTGAGTATGGAGGAAAAAAGAGAGCTTGTATATGAAATATCTAAATCGTCTCATGATGGTGCATCTGAGATACTACAGTCATGGAGCCGTCAAGAGATTTTACAAATATTGTGTGCTGAGATGGGAAAAGAAAGGAAGTATACTGGGCTGACAAAGGTGAAAATTATCGAAAATCTTCTGAAAATTGTTTCCGAAAAGAAATCAAGTGGCCATGATATTGCCACCGACCCTGAACCACATTCTTTTCCTGAAAATGGTCAGAAACCTGCTAAAAGGCAGAGAAAAATTGAGAATCCATCTCGGTTAGCTGTTCCTGAAAACAATGTTTTTGTCAATAACAGTGGCGATGTGAATCATAATACCTCATACTGCAAAAACTCAGCATGCAAGGCTACGCTAAATCAAGGAGATGCATTTTGCAAAAGGTGTTCATGTTGTATTTGTCATCAATATGACGACAACAAAGACCCTAGCCTGTGGTTAATATGCAGCTCTGAAGCTCCATTTCCTGGTGTTTCTTGCGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGAATTGGCAAAGATGGCAAACGCCCCAAACATGATGGAGGCTTCTACTGTGTCTCTTGTGGGAAAGTAAATGATTTACTCGGATGCTGGAGAAAACAATTGATGGTAGCAAAGGATGCCAGACGTGTGGATATACTATGTTACCGTGTCTCCTTAAGCCAAAAACTTTTACAAGGGACTGAAATGTATCGAGAACTTTATGAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGCTCACCACTGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCTTCGGGACCTGAAGTTCAGAAACTCTGTGGTGTCGCTCTTGAATCACTTGATTCAATGCTTTCCAAAAGGATCTCGCCTCTGTCTCCCAATCCAACCATTCAAGATGCAAGTTTACTAGCACCAAATATGGTGAGGTTTGAAGATGTCACTGCAACATCCCTCACTGTTATTTTGTGTTCGGAAGATGCTTCTGGAGAAAATAGTGCTAGTTATGCTGTGTGGCATCGCAAAGCTGATGATGTGAACTATCCATTGGACCCGACTTGCACGATTCTCCTACCAAATAGAAGACTTGGCATCGAGGGTCTACTTCCAGATACAGAATACAGATTCAAATTTGTTTCCAATGATCCGAGGATGTTGTGTGCGTGTGAGGTTCAAGTCTTGACAGCGCATGGTGAAGATGAAGTTCCAAATTGCTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACGGTAGCAGCCTTTCCAATCCGTCATCAGTAGAAGATGAAACTAATCACAGCGACCAGACTGATAATCGATCAGATAATTATCCTTCTTATCACAAGGACAGTGACCAGCTTGCTCCTGGAAATCTATCTAATGATGCGAATAACTGTTCTGGTTTGGGTGGAGTAGGAATCCCCAACAATGCAGATTCCTTGTCAGACAAGCAAGCTGATGTAGGAACAACTGCCATCATAGCTAGTTCTGATGTACCAAAGCTTGAAAACAAGCATTCACAAGAGGAACAAGTAGCCGAGGACATGAGCACCGAGGATGGGTCAGTTCCAACGGGAAGGGAATGTGTTCCGTTAGTAGGTAGCTCAAAAGGGGGATTGCCTAATACTCCCTGCAAGTTGGAGATAATTAAAGATGGTCGGGGAAGAAAAGGTAGATCCAAATTCAGTGGCAAAGATCTAGAAAATGGATCCGGGAAAAGGAATGTCCTTCGAGATGGAAGCACATCCAAGAAGAGAAGTAGTGAAAGGCAAGACGAGGGCTGCAAGGCTAATAGTTTCTCAGATCAGGATTTCGAGTATTATGTGAAGGTGATTAGAAGGTTAGAGTGTGAAGGACACATTGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCTCTCAAGAAATAAGGATTGTGAAAATATATGTAGATACATTTCTTGAAGATTCCGCTTCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGTGTATCAAACAAGAGATCATCAGTGCCTGCAGGATTCTGCATGAAGCTTTGGCATTGA
Protein Sequence
- >Medtr4g127880
MATDSSSQVALDPSKFSKLSMEEKRELVYEISKSSHDGASEILQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSSGHDIATDPEPHSFPENGQKPAKRQRKIENPSRLAVPENNVFVNNSGDVNHNTSYCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHDGSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLSQKLLQGTEMYRELYEIVDEAVKKLEPEVGPLTGSPLKIGRGIVNRLSSGPEVQKLCGVALESLDSMLSKRISPLSPNPTIQDASLLAPNMVRFEDVTATSLTVILCSEDASGENSASYAVWHRKADDVNYPLDPTCTILLPNRRLGIEGLLPDTEYRFKFVSNDPRMLCACEVQVLTAHGEDEVPNCSATERSQSPVTNGSSLSNPSSVEDETNHSDQTDNRSDNYPSYHKDSDQLAPGNLSNDANNCSGLGGVGIPNNADSLSDKQADVGTTAIIASSDVPKLENKHSQEEQVAEDMSTEDGSVPTGRECVPLVGSSKGGLPNTPCKLEIIKDGRGRKGRSKFSGKDLENGSGKRNVLRDGSTSKKRSSERQDEGCKANSFSDQDFEYYVKVIRRLECEGHIEKNFRQKFLTWYSLRATSQEIRIVKIYVDTFLEDSASLAEQLVDTFSECVSNKRSSVPAGFCMKLWH*