Information report for Glyma.13G097000
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
Homologous
- Gossypium hirsutum: Gohir.A08G019500, Gohir.D08G030100
- Juglans regia: Jr11_25360
- Manihot esculenta: MANES_S055500
- Medicago truncatula: Medtr4g127880
- Populus trichocarpa: POPTR_006G167800v3, POPTR_018G091500v3
- Prunus avium: Pav_sc0000359.1_g500.1.mk
- Prunus persica: PRUPE_1G084700
- Rosa chinensis: RchiOBHm_Chr4g0401761
- Vitis vinifera: VIT_11s0052g00830
Gene Resources
- Pfam: PF07227
- UniProt: I1LVQ7
- EMBL: CM000846
- KEGG: gmx:100819331
- OMA: DRVSMKR
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: I1LVQ7
- CDD: cd00063 , cd15521
- eggNOG: ENOG502QR8D
- STRING: 3847.I1LVQ7
- HOGENOM: CLU_016873_0_0_1
Sequences
CDS Sequence
- >Glyma.13G097000
ATGGCTACAGATTCGTCTTTTGAGGGCCTTGCACTTGATCCTTCTAAGTGCAGTAAATTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAGTATCTAACTGGTCGCATGGTGCATCTGAGATGCTGCAGTCATGGAGTCGTCAAGAGATTTTGCAAATATTGTGTGCAGAAATGGGGAAAGAGAGAAAGTATACTGGGCTGACAAAGTTGAAAATTATAGAAAATCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGCGGGAATGAAACTGCGACAGACCCTGAACCACAATCTTCTCCTGCACCTGGTCAGAAGCCTGCCAAAAGGCAGAGAAAGTCTGAGAATCCTTCACACATCCCTGTTCCTGCGACCAGCGTTCCAGTCAATAATGGTGGTGATTCTATTAATACCACATTCTGCAAAAACTCAGCTTGCAAAGCTACCCTGAATCAATCAGATGCATTTTGCAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTAATATGTAGTTCTGAGAATCCATTTCCTGGTGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCAGGAATTGGCAAGGATGGTGAGCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTCTCTTGTTGGAAAATAAATGATTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATACTAGACGCGTAGATATACTCTGTTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGAACTGAAATGTATGAAGAACTTTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGTCCACTCACTGGCTCACCGGTGAAGATTGGAAGGGGGATTGTGAACAGGCTTTCTTCGGGACCTGAGGTTCAGAAACTCTGTGGTTTTGCTCTGGAATCACTTGATTCACTATCGAAAAGGATCTTGCCTTTGTCACCCAAGCCAACAAATCAAGATGCATATTTGCTCGCTCCAAATATGTTGAGGTTTGAAGATGTCACTGCCACTACCCTCACTATTATTTTGGGTTCTGAAGAACCCTCTGGTGAAATTCTTGCTGGTTACACCTTGTGGCATCGCAAAGTTGATGATGTGGACTATCCCATGGACCCAACTTGCACCTCGCTCTTACCAAATAGAAGGTTCAGTGTCTCGGGCCTAATTCCAGGTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTTGAGGGAGTCAGGTATGTGCGAAGTTCAAGTCTCAACAGAGCATGGTGAGGAAGAAGTCCCTAATTGCTCAGCAACTGAAAGAAGTCAGAGCCCGGTAACCAACTGTAGCAGCCTTTCCAATCCATCATCCGTGGAAGATGAAACTAATAACTGTAATCCATATAGTGACCTGACTGATAACCGAGCAGACCATTATCCTTCTTATCACAAGGATAGCAACAAACTTGCTTCTGGAAATTTATCCAATGATGCTATTAACTGTTCCAATCTAGGTGGTGCGGGACTTCCTCCTGATGCAGATTCTTTGTCAGACAAACAGCATGCTGGAGGAACGACTGCCTCCATACCTAGTTCTGATGTGCTAAAGCTCGAAAACAAGCATTCACCAGAGGAACAAATCACTGAGGACATGAGCACCGATGATGGGTTGATTTCCCCAGCTCTAACAGGGAGGGAATGTGTGCCGTTAGTGGGTAGCTCGGAAGGAGGCTTGCCTAATACTCCCTGCAAGTTGGAAACACTTAAGGATGGACCTGGAAAGAATAAAAGATCTAAGTCCAGTGGCAAAGATCAAGAAAATGTATCCGGGAAAAGGGAGGGTCCCCAAGATGGAAGCACATCCAAGAAGAGAAGTGGAGAAAGGCAAGAGGAGGGCCGTGTTGCAAATGGCTTTTCGGATCGTGATTTTGAGTATTATGTGAAGGTGATTAGGTGGTTAGAGTGTGAAGGTCACATAGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCCACCCCTCAAGAAGTTAGGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCTGCATCTCTTGCAGAGCAACTTGTGGACACCTTCTCGGAATGTTTGTCCAGCAAGAGAACATCAGTTGTGCCAGCGGGGTTCTGCATGAAGCTTTGGCATTGA
Protein Sequence
- >Glyma.13G097000
MATDSSFEGLALDPSKCSKLSMEEKRELVYEVSNWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGNETATDPEPQSSPAPGQKPAKRQRKSENPSHIPVPATSVPVNNGGDSINTTFCKNSACKATLNQSDAFCKRCSCCICHQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECALKHDGSGIGKDGERPKLDGGFYCVSCWKINDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEMYEELYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGFALESLDSLSKRILPLSPKPTNQDAYLLAPNMLRFEDVTATTLTIILGSEEPSGEILAGYTLWHRKVDDVDYPMDPTCTSLLPNRRFSVSGLIPGTEYSFKVVSNDLRESGMCEVQVSTEHGEEEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTDNRADHYPSYHKDSNKLASGNLSNDAINCSNLGGAGLPPDADSLSDKQHAGGTTASIPSSDVLKLENKHSPEEQITEDMSTDDGLISPALTGRECVPLVGSSEGGLPNTPCKLETLKDGPGKNKRSKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECLSSKRTSVVPAGFCMKLWH*