Information report for fgenesh2_kg.4__2967__AT2G47310.1
Gene Details
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Functional Annotation
- Functions in an antagonistic manner to its close homolog FCA. The SSF414N protein variant interacts more strongly with CUL1, a component of the E3 ubiquitination complex, than the SSF414D form, mediating differences in SSF protein degradation and FLC expression.
Homologous
- Actinidia chinensis: CEY00_Acc19694
- Brassica napus: BnaC03G0267200ZS, BnaA03G0227000ZS
- Brassica oleracea: Bo3g039630
- Brassica rapa: Bra000446
- Cucumis melo: MELO3C012931
- Cucumis sativus: CsGy3G023550
- Gossypium hirsutum: Gohir.D07G133600, Gohir.A07G129200
- Juglans regia: Jr11_16350
- Manihot esculenta: MANES_01G230100
- Populus trichocarpa: POPTR_002G192900v3
Gene Resources
- Pfam: PF00076 PF00397
- UniProt: D7LGL7
- RefSeq: XP_002880293.1
- EMBL: GL348716
- AlphaFoldDB: D7LGL7
- InterPro: IPR000504 , IPR001202 , IPR012677 , IPR035979 , IPR036020
- PANTHER: PTHR24012
- SUPFAM: SSF51045 , SSF54928
- PROSITE: PS01159 , PS50020 , PS50102
- Gene3D: 2.20.70.10 , 3.30.70.330
- CDD: cd00201
- eggNOG: KOG0144
- STRING: 81972.D7LGL7
- HOGENOM: CLU_020343_1_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.4__2967__AT2G47310.1
TCTCTCTCTACCGGCGCCGGAGAAATTACCGATCAACACAATCTCGACTACAGCGACGAGCTCAAAATTATCGACTTCTAGATGGAGAGACGTGTCCCAAACGCATTCCCTGGTGCTCCACCACCAGTTCCATACTATCAAAACAACTACAACAACCCTCATCATCATCAGACTCATCCGCCGCCGCAGCACCACCATGTCGCCGCCATTGGATTCCACCAATACCCCCAAAACGACAACAGGGATCAGCGTTTCAATCAGCCGCATTACTCCGGCCAACAACAGAACATGATCGTTGATCAGAGTAATAACGCTCCTCCGCCGTTTCCACCGAGTCCTTGCGGTGGTGGCAGCTTAAGGAAGAGACGGTCTCAATCAGCTACAGGTTATCTTCAGTTTCTGCTACATATCGACAAAAAGTGTAAACTTTCATTAAAAAGACTTACTCTTTAACTCGCTTCTGATAATCTGAATTCAGATACTGCTGATGGTAGTATTGCCAAGTTATATGTTGCGCCCATCTCAAAGACATCAACTGAATATGATGTGAGTTTCTTGGCTTACTCTTTTATGCTTTTATTTAAATGTTTCCTTGAGAATTTACTTGTCACAATCTGTGTTATACATCAGATCCGTCAGGTCTTTGAAACATATGGTAATGTCACTGAGATCATTCTACCCAAAGATAAGATGACCGGTGACAGAGCAGGTGATTTCTTTTTTTTTTTTTGTTTCCCAATTACTTGAAAAGCATTTTCTTTCATTGATATTCTTGCTTCTGGGGTTTAGACGTTTCCTTATAACATTTTTTATGTTTATCTTTGCAGCTTACTGTTTTGTTAAGTACAAAACGGTAGAAGAGGGTAATGCCGCTATTGCAGCTTTAGCTGAACAGTTTACCTTTCCTGGGGTGGGTTCTTAACTTCCGCAATGTTTTGTTTTAACATATCCTCGCTGATATGGCTCTTTTCAAACGTTTATTTCGGTTTTTTTTTCAGGAAATGCTTCCACTCAAGGTCCGATTTGCTGACGCTGAACGGGAACGGATTGGTAAGAGTAGGTGTCCATACTTCTAGAGACAGAAATTTAGATAGAACGTAAAACTCTGAAGACAACATTGGTAGTGTAATAGGAGAACCTTTGAAACAGAATCATGTCTTATTACCTTAGTTAGTATTTGATTTACATACCTTGAACTGTTTCTCCTTCTCCCCCTTTACTTAGCGCATAAGACCAAGTTTCACATTTGTGTATTCTCTTTTCATCTGCACTTTAGGTTTTGCCCCGGTGCAACCTCCTGACAACCCTAAACTATATATTAGATGCCTCAACAAACAAACTACAAAAATGGAAGTCCATGAGGTATGGCAGGACTCCTTTTCGGCTTTAACTTTCAGTTTATCTGAATTTCTTTGTCACTGCCAATTGACAGAACAGTGTGCAGATTGTCTTTGTTTTTTTATAGTTAAATTTCTTACTTTGTTGTGAATAAATTCTCAAAGTGTCCTCTTATCAGGTCTTCTCTAGGTTCGGAATCATTGAAGATATTTATATGGCACTTGACGACATGAAGATTAGTCGTGGTATGTCCGTTTCCCCTGGATATTTTGGTGCTCGACTCTGAATCATGCTTGTTTCAGACATCCTAATTTTAAACTGTTCAGATTTTGTAGTTTCTCCTCCAGTAGATTGCGTTTACTTCATATTACTTAATAACTTTATATAAAACTCCCATTTCAACCTTAGTAACAGAAGAATACCTGAACATAGTAAACTGTTATGACAGTTCTCCTCGAAAAACTGCCTGGACAGCCTTACATTGCTTCTCTTTAACCAATGCCTAAAAGTGATATTTCGGATAGCATGAAACCTTATTAAGTAACTTCTTTGCTCTCTGCAGGGTATGCATTTGTTCAGTTTTCTTGTAGGGAGATGGCACTAGCAGCAATCAAAGGTTTAAATGGAGTCTTTACCATGCGGGTAGTTCAGATTGTTCTTTGTTGTATCTCAATGGCTCAATGTTTCTTTGGCGTCCAATGTTACATGACTTACTGTGTTTCTGTCTTCCTTCAGGGTTCTGATCAGCCTTTGATTGTTAGATTTGCAGATCCTAAAAAACCAAGGTTTTACTGTTTACTATTATTCCTTTTCGACATTATTTGCCTGATTTTCCTTTCAATTCCAAACTCACACTCTTGGTTCTTACACTCTAATCTTACTCCATCACTTAAATCTGGATTGGTTGGTGTCTTCAGGTCTACCTTTAACACTCCACCTGCAATGCAACACTTCGACCCAAATTGGCATTCACAACCATATCCCCAATGGGAAAACAAGGAACCTGCAGCCCCTAGAGTCGTTCAGCATCATGATTTCTCTTCACAACCAAATCACTTCCCGCACCAAAATACTCAAGCAGTATCCGAGGTTCATCAACCACTGCATCAAGATATTCCACCTCAAAATTTGGAGAAGCATCAGAATTCTGAGACTGCCAGCGTAGAGGTACTCTTTTTGTAGGATCTGCTAATGGTAGATGGATCTTGAACTCCGAACTAAAGAGTTTATTTAGACGCTTTACGTTTCATAAATCTCGTATATACATCTGCTTGATCTTAAATCTGTAAATACTTTTTTGTAGACTAGAAGGGATGGTCAGAAGATTTCTAGTCATTCAAATTCATTCCCTGAAGAGCAAAATACAGTGAGCTCTGAGTGTGACTGGAGTGAACACACTTGTCCCGATGGGAATAAATATTACTTCCATTGCGTCACTTGCGAAAGCACGGTATACGTTTCCCTCTTTCAATTTGTACTCATCTGAAGCAATATATACTTTTACTGAATTTATTGATGAACACACAGTGGGAGAAACCTGAAGAATACTCCATGTTTGAGAGATGGTTCGAAGAGCAAACAAGGTTACAAGATCTAAAACTTGTATCTCCCCCGTTAAACAATGAGAGCCAAAAAGCAATCGAAAACAGCGAGCAAGTTAAGTCAGATCTATTGCAACAGAATGCTAAACTCCAACAACCATCCTTATCCACAGCGGTTAGAGATAATTTCTACAATGTGTCGTATTGACAGACATCGAGTTCCACTTTTTAGATAGTCTCTCACAAGAAGAGTAAATTGCAATATGTTCAGTGATGTGTTTTCAGGATCAGGAGAACAATGTAGTATATCGAGTAACAACACTAGCTGTTGAAACAACATGTTCATAAAAGGTTTCTTCAGGTAATGAACAGTTGATTCTGTTTATTACTACAATTCAGTGATTCAGCATGGGCTGATTTGGTTTCTGAGCTCTTAAACTTGTTTTAATGTGCAGTAAAAAACCGACGGCGGAAGCTTTGTGTGATGAGCAATGGAGAGATAAAGCTGTAAAACGGAGGAAGAAGGAGATATTAATTATGTGTTGGTTAGAAGAAACCTATGCTTTTAGACTGCAGACAGTAAATAAATAGTACTGGTTTCTAAACTCAATTTTTGTTTAGAAACTTAGAATTGGAAAGAAAAATAATCGAAAATTTGTTTTGATAAACGGTAAATAAACCTATTTTCACCTGATCCAAACCAAAAACTAAACGGTATCTAATTAACCTCTACTATAATCCATTTCAAATTCAATATTATTATTTACAAAAATTCGGAATTTCCGTTGTTAGGCTGGCAGTAATGTTTAGTGAAAAATAAT
CDS Sequence
- >fgenesh2_kg.4__2967__AT2G47310.1
ATGGAGAGACGTGTCCCAAACGCATTCCCTGGTGCTCCACCACCAGTTCCATACTATCAAAACAACTACAACAACCCTCATCATCATCAGACTCATCCGCCGCCGCAGCACCACCATGTCGCCGCCATTGGATTCCACCAATACCCCCAAAACGACAACAGGGATCAGCGTTTCAATCAGCCGCATTACTCCGGCCAACAACAGAACATGATCGTTGATCAGAGTAATAACGCTCCTCCGCCGTTTCCACCGAGTCCTTGCGGTGGTGGCAGCTTAAGGAAGAGACGGTCTCAATCAGCTACAGATACTGCTGATGGTAGTATTGCCAAGTTATATGTTGCGCCCATCTCAAAGACATCAACTGAATATGATATCCGTCAGGTCTTTGAAACATATGGTAATGTCACTGAGATCATTCTACCCAAAGATAAGATGACCGGTGACAGAGCAGCTTACTGTTTTGTTAAGTACAAAACGGTAGAAGAGGGTAATGCCGCTATTGCAGCTTTAGCTGAACAGTTTACCTTTCCTGGGGAAATGCTTCCACTCAAGGTCCGATTTGCTGACGCTGAACGGGAACGGATTGGTTTTGCCCCGGTGCAACCTCCTGACAACCCTAAACTATATATTAGATGCCTCAACAAACAAACTACAAAAATGGAAGTCCATGAGGTCTTCTCTAGGTTCGGAATCATTGAAGATATTTATATGGCACTTGACGACATGAAGATTAGTCGTGGGTATGCATTTGTTCAGTTTTCTTGTAGGGAGATGGCACTAGCAGCAATCAAAGGTTTAAATGGAGTCTTTACCATGCGGGGTTCTGATCAGCCTTTGATTGTTAGATTTGCAGATCCTAAAAAACCAAGGTCTACCTTTAACACTCCACCTGCAATGCAACACTTCGACCCAAATTGGCATTCACAACCATATCCCCAATGGGAAAACAAGGAACCTGCAGCCCCTAGAGTCGTTCAGCATCATGATTTCTCTTCACAACCAAATCACTTCCCGCACCAAAATACTCAAGCAGTATCCGAGGTTCATCAACCACTGCATCAAGATATTCCACCTCAAAATTTGGAGAAGCATCAGAATTCTGAGACTGCCAGCGTAGAGACTAGAAGGGATGGTCAGAAGATTTCTAGTCATTCAAATTCATTCCCTGAAGAGCAAAATACAGTGAGCTCTGAGTGTGACTGGAGTGAACACACTTGTCCCGATGGGAATAAATATTACTTCCATTGCGTCACTTGCGAAAGCACGTGGGAGAAACCTGAAGAATACTCCATGTTTGAGAGATGGTTCGAAGAGCAAACAAGGTTACAAGATCTAAAACTTGTATCTCCCCCGTTAAACAATGAGAGCCAAAAAGCAATCGAAAACAGCGAGCAAGTTAAGTCAGATCTATTGCAACAGAATGCTAAACTCCAACAACCATCCTTATCCACAGCGGATCAGGAGAACAATGTAGTATATCGAGTAACAACACTAGCTGTTGAAACAACATGTTCATAA
Protein Sequence
- >fgenesh2_kg.4__2967__AT2G47310.1
MERRVPNAFPGAPPPVPYYQNNYNNPHHHQTHPPPQHHHVAAIGFHQYPQNDNRDQRFNQPHYSGQQQNMIVDQSNNAPPPFPPSPCGGGSLRKRRSQSATDTADGSIAKLYVAPISKTSTEYDIRQVFETYGNVTEIILPKDKMTGDRAAYCFVKYKTVEEGNAAIAALAEQFTFPGEMLPLKVRFADAERERIGFAPVQPPDNPKLYIRCLNKQTTKMEVHEVFSRFGIIEDIYMALDDMKISRGYAFVQFSCREMALAAIKGLNGVFTMRGSDQPLIVRFADPKKPRSTFNTPPAMQHFDPNWHSQPYPQWENKEPAAPRVVQHHDFSSQPNHFPHQNTQAVSEVHQPLHQDIPPQNLEKHQNSETASVETRRDGQKISSHSNSFPEEQNTVSSECDWSEHTCPDGNKYYFHCVTCESTWEKPEEYSMFERWFEEQTRLQDLKLVSPPLNNESQKAIENSEQVKSDLLQQNAKLQQPSLSTADQENNVVYRVTTLAVETTCS