Information report for Bra005095
Gene Details
Functional Annotation
- Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.
Homologous
- Arabidopsis thaliana: AT2G38560
- Brassica napus: BnaA05G0070500ZS, BnaC04G0079900ZS, BnaA03G0185600ZS, BnaC03G0217700ZS
- Brassica oleracea: Bo4g027160, Bo3g032540
- Gossypium hirsutum: Gohir.A09G213664, Gohir.D09G215100, Gohir.D10G112700, Gohir.A10G153500
- Manihot esculenta: MANES_08G170400, MANES_09G123400
- Populus trichocarpa: POPTR_016G138100v3, POPTR_006G109300v3
- Vitis vinifera: VIT_08s0058g01410
Gene Resources
- Pfam: PF08711 PF01096 PF07500
- UniProt: A0A7T1TEI7
- EMBL: MN702777
- OMA: DACDPFR
- InterPro: IPR001222 , IPR003617 , IPR003618 , IPR006289 , IPR017923 , IPR035100 , IPR035441 , IPR036575
- PANTHER: PTHR11477 , PTHR11477:SF39
- SUPFAM: SSF46942 , SSF47676 , SSF57783
- PROSITE: PS00466 , PS51133 , PS51319 , PS51321
- Gene3D: 1.10.472.30 , 1.20.930.10 , 2.20.25.10
- SMR: A0A7T1TEI7
- CDD: cd00183 , cd13749
- HOGENOM: CLU_037637_0_0_1
Sequences
gDNA Sequence
- >Bra005095
CAACAGAACTTCCAGTGGTTGTCACAGTTGACACACGTAACATAAGTAGTCATCGGCTCATCAGCACTCCTCGTCTGCATCTGATAGTAAGTGCATTTACGCTGCCCACACCTCCCACACTTGAACTGATCAGTACTCGCTTTCGGCGCCTGGCCACGCTCACAATCAAACAGAAACTTCTCCTTGATCTGATTAGTCTCCTGTTTCCTCTTGTCGCTTGCCATCTCTTCACCAGACAATGTAATAAGCTTCTCCGGCGACACCTCCCCTGTGAGAACCCTCCTCCTCAGATCCGGATTGTTACTGTCCCTCAGGTTGAACATTATAGACCTGTACTTCACCTTCTGAGCTCCCGTTGACCGTCCCAGCTTCTCAAACATGTGAGACTCCACAGAGACAGCGACGCGGATTGGATCACATCCGACAACTCTCGCTCTATCGTAGTCATCTGATTCGTCATGGACCTTGGACATTGCGTCCACAAGCAGCTCACGGATCTTGTCACGCACGGGGTCGTTGCATTTCACCATTGAAGTCAGCTTTGGTGCACCATTAGGCTGTGCCTTTGCTGGAGCTTTCGTACTAGATTGATTCTCCTTTGAGGCCCCAGCATTGACTTTGTTGTCTCGTTCCTTCCTCTCTTCTACCTTGATGCTCTTAGCTGAATCACCTCTCTGAAGCTTCTGCACTTTCACAGGCGCTGGATTTGCATCCTTCCTGTCTAGCTTAGACTTGGACGTCTCTTCAATGACAAGTTTCTTCCATGTCTCAAGAAGATCAGTAGCTACGGTTTTGATTTCTTCAATAGGATGTTTTGAAAGAGACCTTAGCTTCTTCCCTACCTGGAAGCAATAACGTGCTATTAGAGTGATTTTTAAATCTCTCTAACATTGTTTGAGCATAATGAGATTAGAATTAAAGATAAATCAGTTTTAATTTCCTGTGATTTTGAACCTCTCTAATATTGTTTGAGCATAGTCAACAATAACCTTCATAAAGTTTTGATCTTTTCAATTTTTTTGAAAAGTTTCAGATGAGATTAATGAACCCTAACACAAGTCAATGCTATGAGATTAAGGCAAGCAACAGATTCAGAGAACCCTCTGATTCAAACAGCGTATTAGGCAAAAAAGATCGAGACTTTGTAGATTAAAGAGATGAAATTTGAAAAGAACCTGAGTCGCGACGAGCATGTCGTATGTGATGGGAAACTTCTTGAGCTGTTTAAGGGCGTCGAGAGATCGAGAAACCTCCGGACCTGAGGAGGTAACGCCGTCGATCGCCGCCGCATCGGCTGCCTTCTTCGCCGCCTCGAACAATTCGATCAATTCGCTTTCCAT
CDS Sequence
- >Bra005095
ATGGAAAGCGAATTGATCGAATTGTTCGAGGCGGCGAAGAAGGCAGCCGATGCGGCGGCGATCGACGGCGTTACCTCCTCAGGTCCGGAGGTTTCTCGATCTCTCGACGCCCTTAAACAGCTCAAGAAGTTTCCCATCACATACGACATGCTCGTCGCGACTCAGGTAGGGAAGAAGCTAAGGTCTCTTTCAAAACATCCTATTGAAGAAATCAAAACCGTAGCTACTGATCTTCTTGAGACATGGAAGAAACTTGTCATTGAAGAGACGTCCAAGTCTAAGCTAGACAGGAAGGATGCAAATCCAGCGCCTGTGAAAGTGCAGAAGCTTCAGAGAGGTGATTCAGCTAAGAGCATCAAGGTAGAAGAGAGGAAGGAACGAGACAACAAAGTCAATGCTGGGGCCTCAAAGGAGAATCAATCTAGTACGAAAGCTCCAGCAAAGGCACAGCCTAATGGTGCACCAAAGCTGACTTCAATGGTGAAATGCAACGACCCCGTGCGTGACAAGATCCGTGAGCTGCTTGTGGACGCAATGTCCAAGGTCCATGACGAATCAGATGACTACGATAGAGCGAGAGTTGTCGGATGTGATCCAATCCGCGTCGCTGTCTCTGTGGAGTCTCACATGTTTGAGAAGCTGGGACGGTCAACGGGAGCTCAGAAGGTGAAGTACAGGTCTATAATGTTCAACCTGAGGGACAGTAACAATCCGGATCTGAGGAGGAGGGTTCTCACAGGGGAGGTGTCGCCGGAGAAGCTTATTACATTGTCTGGTGAAGAGATGGCAAGCGACAAGAGGAAACAGGAGACTAATCAGATCAAGGAGAAGTTTCTGTTTGATTGTGAGCGTGGCCAGGCGCCGAAAGCGAGTACTGATCAGTTCAAGTGTGGGAGGTGTGGGCAGCGTAAATGCACTTACTATCAGATGCAGACGAGGAGTGCTGATGAGCCGATGACTACTTATGTTACGTGTGTCAACTGTGACAACCACTGGAAGTTCTGTTGA
Protein Sequence
- >Bra005095
MESELIELFEAAKKAADAAAIDGVTSSGPEVSRSLDALKQLKKFPITYDMLVATQVGKKLRSLSKHPIEEIKTVATDLLETWKKLVIEETSKSKLDRKDANPAPVKVQKLQRGDSAKSIKVEERKERDNKVNAGASKENQSSTKAPAKAQPNGAPKLTSMVKCNDPVRDKIRELLVDAMSKVHDESDDYDRARVVGCDPIRVAVSVESHMFEKLGRSTGAQKVKYRSIMFNLRDSNNPDLRRRVLTGEVSPEKLITLSGEEMASDKRKQETNQIKEKFLFDCERGQAPKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWKFC