Information report for Bo3g032540
Gene Details
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Functional Annotation
- Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy.
Homologous
- Arabidopsis thaliana: AT2G38560
- Brassica napus: BnaC03G0217700ZS, BnaA03G0185600ZS, BnaA05G0070500ZS, BnaC04G0079900ZS
- Brassica rapa: Bra000069, Bra005095
- Gossypium hirsutum: Gohir.A09G213664, Gohir.D09G215100, Gohir.A10G153500, Gohir.D10G112700
- Manihot esculenta: MANES_08G170400, MANES_09G123400
- Populus trichocarpa: POPTR_016G138100v3, POPTR_006G109300v3
- Vitis vinifera: VIT_08s0058g01410
Gene Resources
- Pfam: PF08711 PF01096 PF07500
- UniProt: A0A3P6AZI3
- EMBL: LR031872
- AlphaFoldDB: A0A3P6AZI3
- OMA: RFVVMTH
- InterPro: IPR001222 , IPR003617 , IPR003618 , IPR006289 , IPR017923 , IPR035100 , IPR035441 , IPR036575
- PANTHER: PTHR11477 , PTHR11477:SF0
- SUPFAM: SSF46942 , SSF47676 , SSF57783
- PROSITE: PS00466 , PS51133 , PS51319 , PS51321
- Gene3D: 1.10.472.30 , 1.20.930.10 , 2.20.25.10
- CDD: cd00183 , cd13749
Sequences
gDNA Sequence
- >Bo3g032540
CCCCGTTATCTCTATCTTCTCCGCGCGACCAGAACGAAGTTCCGCCGAACAAATCTCGTAACCCTATTTTTGTCCTTATCCCATTCTTCTTCAATCGCCACTCTCCGCAAAGAAAGTTGGGCGCTTTGCTCTCTGGAGCCAAGAGATTCGAAGTGACGATGGAAAGTGAGTTGATTGCATTGTTCGAGGCGGCGAAGAAGGCGGCAGATGCGGTGGCTGTCGACGGTGTTACCTCCTCAAGCCCGGAGGTTTCTCAATCTCTCGATGCATTAGAGAAACTCAAGACGTTTCCTGTCACGTACAACACGCTCGTCGCGACTCAGGTTCGTCTCTTTAACCCTAATTAGGTTTGATTGATTTTGAACGAATTTAGAAAAACAGATTTTAGGGTTTTTTCTGGGTATTGCTTGCTTAATCGTGTAGCATTGAAAAGATGATAACTTTAATTGTTGTTGATTCTCTATCTCCTTGCATTGGATTAGAGAAAGTTATATCCTTTTTTGTTTGTTTGATTCTAGGTAGGGAAGAAGCTGAGGTCTCTTGCAAAGCATCCTGTTGAGGAAATCAAAAGCGTAGCTACTGATCTGCTTGAGACATGGAAGAGAGTTGTCATTGAGGAGACGACATCCAAGGCTAAGAAGACCGAAAGCACAAACGGTTGCAAAGAGGTTAAGTTGGAGAGGAAGGATGTGAACCCCGTGCCTGTGAAAGTCCAGAAGCTCCAGAGGGGTGATTCAGCTAAGAGTATCAAGGTTGAGAGAAAGGAACCAGACAGCAAAGTGAAGGTAGAGAGAAAGGAACCAGACAACAAAGTTAAGATGGATCATCGTGGTCAGACTACTGTCAAGGATGAAAAGGTCTCAAGAGAAACGCTAACAAGTGTGAAGCCTTCAGACAAGGCACCTAATGGTGCTCCAAAGCTGACTTCAATGGTCAAATGCAACGATCCCGTGCGTGACAAGATCCGTGAGCTGCTTGTGGACGCCATGTCCAAGGTTCATGGAGAATCCGATGAGTACGACAGAGCGAGAGTAGTTGGATGTGATCCAATCCGCGTTGCTGTCTCTGTGGAGTCTCATATGTTTGAGAAACTGGGCCGGTCAACGGGAGCGCAGAAGGTCAAGTACAGATCTATAATGTTCAACCTGAGGGACAGTAACAACCCAGACCTGAGAAGGAGAGTTCTCACTGGGGAGGTGTCACCAGAGAAACTCATCACACTGTCGGGTGAAGAGATGGCGAGCGACAAGAGGAAACAAGAGACCAACCAGATCAAAGAGAAGTTTCTGTTCGATTGTGAACGTGGTCAGGCACCAAAAGCAAGTACTGACCAGTTCAAGTGCGGGCGGTGTGGTCAGCGCAAATGTACTTACTATCAGATGCAGACAAGGAGTGCTGATGAGCCCATGACGACTTATGTTACATGTGTTAACTGTGACAACCACTGGAAGTTCTGTTGA
CDS Sequence
- >Bo3g032540
ACCCCGTTATCTCTATCTTCTCCGCGCGACCAGAACGAAGTTCCGCCGAACAAATCTCGTAACCCTATTTTTGTCCTTATCCCATTCTTCTTCAATCGCCACTCTCCGCAAAGAAAGTTGGGCGCTTTGCTCTCTGGAGCCAAGAGATTCGAAGTGACGATGGAAAGTGAGTTGATTGCATTGTTCGAGGCGGCGAAGAAGGCGGCAGATGCGGTGGCTGTCGACGGTGTTACCTCCTCAAGCCCGGAGGTTTCTCAATCTCTCGATGCATTAGAGAAACTCAAGACGTTTCCTGTCACGTACAACACGCTCGTCGCGACTCAGGTAGGGAAGAAGCTGAGGTCTCTTGCAAAGCATCCTGTTGAGGAAATCAAAAGCGTAGCTACTGATCTGCTTGAGACATGGAAGAGAGTTGTCATTGAGGAGACGACATCCAAGGCTAAGAAGACCGAAAGCACAAACGGTTGCAAAGAGGTTAAGTTGGAGAGGAAGGATGTGAACCCCGTGCCTGTGAAAGTCCAGAAGCTCCAGAGGGGTGATTCAGCTAAGAGTATCAAGGTTGAGAGAAAGGAACCAGACAGCAAAGTGAAGGTAGAGAGAAAGGAACCAGACAACAAAGTTAAGATGGATCATCGTGGTCAGACTACTGTCAAGGATGAAAAGGTCTCAAGAGAAACGCTAACAAGTGTGAAGCCTTCAGACAAGGCACCTAATGGTGCTCCAAAGCTGACTTCAATGGTCAAATGCAACGATCCCGTGCGTGACAAGATCCGTGAGCTGCTTGTGGACGCCATGTCCAAGGTTCATGGAGAATCCGATGAGTACGACAGAGCGAGAGTAGTTGGATGTGATCCAATCCGCGTTGCTGTCTCTGTGGAGTCTCATATGTTTGAGAAACTGGGCCGGTCAACGGGAGCGCAGAAGGTCAAGTACAGATCTATAATGTTCAACCTGAGGGACAGTAACAACCCAGACCTGAGAAGGAGAGTTCTCACTGGGGAGGTGTCACCAGAGAAACTCATCACACTGTCGGGTGAAGAGATGGCGAGCGACAAGAGGAAACAAGAGACCAACCAGATCAAAGAGAAGTTTCTGTTCGATTGTGAACGTGGTCAGGCACCAAAAGCAAGTACTGACCAGTTCAAGTGCGGGCGGTGTGGTCAGCGCAAATGTACTTACTATCAGATGCAGACAAGGAGTGCTGATGAGCCCATGACGACTTATGTTACATGTGTTAACTGTGACAACCACTGGAAGTTCTGTTGA
Protein Sequence
- >Bo3g032540
TPLSLSSPRDQNEVPPNKSRNPIFVLIPFFFNRHSPQRKLGALLSGAKRFEVTMESELIALFEAAKKAADAVAVDGVTSSSPEVSQSLDALEKLKTFPVTYNTLVATQVGKKLRSLAKHPVEEIKSVATDLLETWKRVVIEETTSKAKKTESTNGCKEVKLERKDVNPVPVKVQKLQRGDSAKSIKVERKEPDSKVKVERKEPDNKVKMDHRGQTTVKDEKVSRETLTSVKPSDKAPNGAPKLTSMVKCNDPVRDKIRELLVDAMSKVHGESDEYDRARVVGCDPIRVAVSVESHMFEKLGRSTGAQKVKYRSIMFNLRDSNNPDLRRRVLTGEVSPEKLITLSGEEMASDKRKQETNQIKEKFLFDCERGQAPKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWKFC