Information report for Bo3g039630
Gene Details
|
|
Functional Annotation
- Functions in an antagonistic manner to its close homolog FCA. The SSF414N protein variant interacts more strongly with CUL1, a component of the E3 ubiquitination complex, than the SSF414D form, mediating differences in SSF protein degradation and FLC expression.
Homologous
- Arabidopsis thaliana — AT2G47310
Gene Resources
- Pfam: PF00076 PF00397
- UniProt: A0A0D3B739
- AlphaFoldDB: A0A0D3B739
- OMA: WENKEPA
- InterPro: IPR000504 , IPR001202 , IPR002130 , IPR012677 , IPR029000 , IPR035979 , IPR036020
- PANTHER: PTHR47269 , PTHR47269:SF3
- SUPFAM: SSF50891 , SSF51045 , SSF54928
- PROSITE: PS01159 , PS50020 , PS50072 , PS50102
- Gene3D: 2.20.70.10 , 2.40.100.10 , 3.30.70.330
- CDD: cd00201 , cd00317
- eggNOG: KOG0144 , KOG0882
- STRING: 109376.A0A0D3B739
- HOGENOM: CLU_020343_1_0_1
Sequences
gDNA Sequence
- >Bo3g039630
TGGAAAGACGCGTCGCAAACGCCTTCCCTGGACCTGGTCCTCCACCAACACAAGTTCCCTATTATCATAACAACAACAACAACTACAACCCTCATCAGATTCATCCGTCGCACCACCATGTCTCCGCCGTTGGATTCCACCAATACCCACAAAACGACAATAGAGATCAGCGTTTCAATCAGCCGCATTTTGATAATCAACAGCAACCCAATATGATCGTTGACGCTCCGCCGCTTCCACCGAGTGGTGAGTTTAGTCCTTGCGGCGGCGGAAGCAGCTTGAGGAAGAGACGCTCTCTATCCTCCTCCACCACCCCAGGTAACATCTCCAAGTTTCATTCTTTCCAAAAGGTGCAAACTTTTGTGATTAAAATACTCTTTTTTCTTTTTCATGAAGATCCTAGTGCTGCTGCTGATGGTTGTATTGCCAAGTTATATGTTGCGCCTCTTCCAAAGACAGCTAAGGAAGACGATGTGAGTTCCTTGCCTTACTTGTTTTCCTTTGAGATTCTGTTTCACAGTCTGTGTTTTATCTTTATGTCAGGTCCGTCAGGTGTTTGAAAAGTATGGTAATGTCACTGAGATCATCCTACCCAGAGATAAGATGAGCGGTGAACGAGCAGGTGACTTCTTGAGGATGTTCTTTTTTTTTACTGCCTTTCATTGATTACCAGTTTGGTTATAACAATGCTCTTTTGCAGCTTACTGTTTTGTCAAGTACAGAAAGCTAGAAGAGGGTAATGCCGCTATTGCAGCTTTAACAGATCAGTATACCTTTCCTGGGGTGGGTCTTCGCTTCTAAACGTTTCTTCACTCTTGTATGTATGATTCTTTTCAAAAGGTTTTTATTTATTATTTCATTACTTCAGGAAATGTCTCCAGTTCAGGTTAGGTATGCCGGCGCTGAACGTGAACGGATTGGTAAAGATTGCTCTTTCATGCTCTTAAGAAAACCGAAAGTAACTATACTAAGACAAAATGATTGGCCGACCATAATGGGAACTTTTCAAAAACAAAAACAAAAAAATCATGTTTTAGTATTTTGATTTCTCATGCCTTCAACTGTCCTCTTCTTTTTTTCTCATTTGTGTATTCTCTTTCCATCTTGAGTTCAGGTGTTTCAACAGTGCAAATTCCTGATAAGTTATATGTTAGATGCCTTAACAAACAAACAACAAAAACGGACGTCCATGAGGTATGGTTGGAGTGTCCTTTTACGTCTTTTGATTTTTGTACTTTGATATGTTCTGCCTGGCTTCATTTGATGTGAACAAAGTGTCCTCTTTTCAGGTATTTTGTAGGTTCGGAGTCATTGAAGATATTTATATGGCAGTCGACGACATGAAGGTTAGCCGTGGTATGTCCATTGCCCTTCACACATCCTACATTGTATTGTAAAGCTTCCTGTATAGCCCTTACTAGTAACCGGAGCTAATTGCACTTAGTAAACTGTTATGTCTGTTCGTCTTTGGACAAAACACTTGGGAAACATCATTTATATAAACTAGAGAACTATATGCAACTAGCTTTAAGATCTTGTTAGTTTTGTTCTTTCTTCACGCATCTGTTTTAATGTGATGTTTTGGATTTGCATGGAACCTTGCTTTTTAACTAATTTTATTTTCTCTCTGCAGGGTTTGCATTTGTTCAGTTTTCTCGTAAGGAGATGGCACTAGCAGCAATCAAAGGGTTAAATGGAGTATTTACCATGCGGGTAGGGTAGTTCACAGACTTCTTCTTTGTTGTATCTCAGTGCCTCAGTCTTTATTTGATCACTTCCTTTGTCTTTCCTTTTAGGGTTCTGATCAGCCTCTGATTGTTAGATTTGCAGACCCTAAAAGACCTCGTCTAGGGGAACCAAGGTTCTACTGTTCCCTATTTTCTTTTCTACGTTATTTATTTGAGGATTTGCCTAATTTTATATTGAATTGTAAACTCATCTTCTTGGTATTTACACTTTACATATGGTTTTGTCACTTAGTTATGGTTCTTGAAGGATTTGCTTTCAAAACTTTTGCAGCAGCAATAATACAATCCTGATACCTGATATATTACTCCATCATCTCAACATTATTTCAATTGTTCTGTGTCGTCAGGTCTAACTTTAATGCTTCGCCTGCAATGCAACAATTCGATCCAAATTGGCACCCACAACCATATCCCCAGTGGGGAAACAAAGAACCTGCAGCCCCAAGAGTTGTTGATTTCGCTTCACAGCCTAATCACTTCCCGCAGCAAAATGCTCAAGCAGTATCCGCGTTTCAAACACCGATGCATCAAGATTTTGAGAAGCATCAGACTGCCAGCGTGGAGGTACGTACTCCTTTTGTACTAGGATCTGTTAATGGTAGACAGATATTGAACTCTGGACCATGAGCTTATATAGAGGGTATAGGTTTTCATAAATCTCTTATACACACATCTGCTTGGTCTTCATATCTGTTACTACTTTTTGTGTAGACTAGAAGCGATGGTCAGAAGATTTCTAGTCGTTCAAATGCCATTCATGAAGATCAAAATACAGAAGAATGTGACTGGAGTGAACACACTTGTCCTGATGGGAACAAGTATTATTTCCATTGTGTCACTTTTGAAAGCACGGTAGTACTTTTTCTCCCCCTCTCTCATTGTGCACTCCACTGAAGCAATGTCTGATTATATGAATGAACACACAGTGGGAGAAACCAGAGGAGTACTCCATGTTTGAGAGATGGTTCGACGAGCAAATAAGGCTACAAGATCAAAATATTGCCAAGAGCCAAGATGCAATCAAAAACACCCAGCAAGATGGGTCTACTCTACTCCAACAACAATCCTTATCCACAGCGGTTAGATATATCATTTCTTGACACACTTGGACTTCCATAAATTTTTTTTAAAAAAAGTTAGTATCTTCTTACAAGAAGAGTAGACTCCAATCTTGCAATGTGATGTGTTTGTTTCAGGATGAGGAGAACATTTCCGTATATCCGGTAACAAGAGTGGCTGCTGAATCAACCTGTTCATAACAGTTGAGTCTCTTTACTAAAAGGAAGCTAATATTACATCTCACAAGATCTTCTTATATTATCCTGCTATTTCAATACAGGACAAGTCACCAGACAAGTATTTTGGAAAGGAGAATGAAAAAAAGAGTAGTCCTGAGGTAAAAAGAAGTTGATTTCTTCAAGACTCTGAACATTTGGTACATATTTGCTGGAATCCAATTGAAAAGGTGTTATGAAAGTTGGTTCGAAACCTCTGCAGCTTATAGTCTCGCGCATTTGTTTCTGAGCAACAAGACACTCTAGTGATGTCCACCACACCTTTTTAATAAAAGAAAAACGCTTTCTTGGTCATTTGATATAAACCCACCACACATATCTTGGTTGGTTTTAATTACACAATATGTTTAAAAAAATATTTACGATAGCAAGAAAAAGTCGACAACTGAAAGTTAACTAAAAGTTGGAGTTTATTTGGTAAATAAAACCTATAATTTCACCTGATCCGAACCAAAAACTAAAAATCCATTTTTCAATTCAAAGTGCCTCTGGGCGAAAGAGAGGGTTCATCATCGTCAATAATTACGTTCTCTTTAAAAGGCCCAAATAGATTTGCAGACCAAAGAAAGAAGAAGCCACTCTCTCTTTGCAGAAACAAACATCAACTTTACTCCTGAATTCTCCAGAAGAAGAAGAGAAGGTGGTAAGTGTTTAGTCGAGTTAAGTTTCTCGGTCCTGTCTAGATCGGAGATTTATGGATCTCATAGAGATTATTATATTATTCCCTGCAGAAGCTAACCGATTTTCGAATCTGATACTTCCTATTTGATTGATCTCATGATTTGTCTTCTCCAAGGTGGTTAGGATCTAAAAGCTAATGGCGAAGATCAAGCCTCAAGCTCTATTGCAGCAAAGCAAGAAGAAGAAAGGACCTGCTCCTATTAGCATAACCAGCATCGTGATTTACACCTTGGCCGTGCTTTTGGTCGTCTTCGTCCTCTTCTCCGCCTACAAACGTTGGACCCTCAGGTTCCTTTGAGATTCAGATTGATTCTATCTTTAGAGAAATTATTCTAAGATGTGAAAATGACTTGTTGTGGGCTTACAGATCCGAGATCCCAACGCACAATGGTAGATCACTTCTTCAGGTACTATTATTCTCTCTGTCTATAGTTATACATACCCCTTTGTCAAATGATTGTCTTGTTCTTGTGTAGGATCCAGCCTTCCCTGGAGTGAAGAAGAATACTAATCTCCCATGGTTTGCTGTGAGTTTTCATTATCATCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCTTCTCTTTGTTTTTAATCTATCTTTTCCTCTGTTGGACTCTAGACCTTGGATACTGGCAAAGGTTCAGTGACCATTGAACTGTTCAAGGATGCTGCTCCCAACGTTGTTGACGAATTCATCAACTTATCGTAAGCAATAACTTCATACTGTATTTTCTTCCATTTTTTTCTTAACACAACTTCTTATATAGTATGTGTTGTGTTTTGTCAGTCAAGATGGGTATTTCAAAGGTTTCTTATTCAGTAGAGTTGTAAAGCATTCTGTCATTCAAGCTGGCCACTCTGCTCAGTTCGATGCTGTCAAAGATTGGGTTCTCCAAAAGAATAGTCTTCATACCAGGTTACATAGTTAGCAAATAAAAATATGGAGGCTTTTTGGTTTTTGGCTGATTATGGAAACTCTTTCCATCTCTGTCTTGATGCTGCAGTTTAAAACACGAAGAATACATGGTGGGGACCCCTAAAGCTAAAAACGAGCAAGGAGGATTTGAGTTTTTCATTGTATCTTCTCAGATCACAGACCTCAATGAGAAATTGACAGTCTTTGGTCGAGTTGTGAAGGGACAAGACGTTGTTAAGGAGATCGAGGAGGTTGAGATAGATGAGCATTATCAACCAAAAGCACCAATCGAGATCATGTCCGTCACTTTGCTTCAAGACATGTGA
CDS Sequence
- >Bo3g039630
ATGGAAAGACGCGTCGCAAACGCCTTCCCTGGACCTGGTCCTCCACCAACACAAGTTCCCTATTATCATAACAACAACAACAACTACAACCCTCATCAGATTCATCCGTCGCACCACCATGTCTCCGCCGTTGGATTCCACCAATACCCACAAAACGACAATAGAGATCAGCGTTTCAATCAGCCGCATTTTGATAATCAACAGCAACCCAATATGATCGTTGACGCTCCGCCGCTTCCACCGAGTGGTGAGTTTAGTCCTTGCGGCGGCGGAAGCAGCTTGAGGAAGAGACGCTCTCTATCCTCCTCCACCACCCCAGATCCTAGTGCTGCTGCTGATGGTTGTATTGCCAAGTTATATGTTGCGCCTCTTCCAAAGACAGCTAAGGAAGACGATGTCCGTCAGGTGTTTGAAAAGTATGGTAATGTCACTGAGATCATCCTACCCAGAGATAAGATGAGCGGTGAACGAGCAGCTTACTGTTTTGTCAAGTACAGAAAGCTAGAAGAGGGTAATGCCGCTATTGCAGCTTTAACAGATCAGTATACCTTTCCTGGGGAAATGTCTCCAGTTCAGGTTAGGTATGCCGGCGCTGAACGTGAACGGATTGGTGTTTCAACAGTGCAAATTCCTGATAAGTTATATGTTAGATGCCTTAACAAACAAACAACAAAAACGGACGTCCATGAGGTATTTTGTAGGTTCGGAGTCATTGAAGATATTTATATGGCAGTCGACGACATGAAGGTTAGCCGTGGGTTTGCATTTGTTCAGTTTTCTCGTAAGGAGATGGCACTAGCAGCAATCAAAGGGTTAAATGGAGTATTTACCATGCGGGGTTCTGATCAGCCTCTGATTGTTAGATTTGCAGACCCTAAAAGACCTCGTCTAGGGGAACCAAGGTCTAACTTTAATGCTTCGCCTGCAATGCAACAATTCGATCCAAATTGGCACCCACAACCATATCCCCAGTGGGGAAACAAAGAACCTGCAGCCCCAAGAGTTGTTGATTTCGCTTCACAGCCTAATCACTTCCCGCAGCAAAATGCTCAAGCAGTATCCGCGTTTCAAACACCGATGCATCAAGATTTTGAGAAGCATCAGACTGCCAGCGTGGAGACTAGAAGCGATGGTCAGAAGATTTCTAGTCGTTCAAATGCCATTCATGAAGATCAAAATACAGAAGAATGTGACTGGAGTGAACACACTTGTCCTGATGGGAACAAGTATTATTTCCATTGTGTCACTTTTGAAAGCACGTGGGAGAAACCAGAGGAGTACTCCATGTTTGAGAGATGGTTCGACGAGCAAATAAGGCTACAAGATCAAAATATTGCCAAGAGCCAAGATGCAATCAAAAACACCCAGCAAGATGGGTCTACTCTACTCCAACAACAATCCTTATCCACAGCGGATGAGGAGAACATTTCCGTATATCCGGACAAGTCACCAGACAAGTATTTTGGAAAGGAGAATGAAAAAAAGAGTAGTCCTGAGCTAATGGCGAAGATCAAGCCTCAAGCTCTATTGCAGCAAAGCAAGAAGAAGAAAGGACCTGCTCCTATTAGCATAACCAGCATCGTGATTTACACCTTGGCCGTGCTTTTGGTCGTCTTCGTCCTCTTCTCCGCCTACAAACGTTGGACCCTCAGATCCGAGATCCCAACGCACAATGGTAGATCACTTCTTCAGGATCCAGCCTTCCCTGGAGTGAAGAAGAATACTAATCTCCCATGGTTTGCTACCTTGGATACTGGCAAAGGTTCAGTGACCATTGAACTGTTCAAGGATGCTGCTCCCAACGTTGTTGACGAATTCATCAACTTATCTCAAGATGGGTATTTCAAAGGTTTCTTATTCAGTAGAGTTGTAAAGCATTCTGTCATTCAAGCTGGCCACTCTGCTCAGTTCGATGCTGTCAAAGATTGGGTTCTCCAAAAGAATAGTCTTCATACCAGTTTAAAACACGAAGAATACATGGTGGGGACCCCTAAAGCTAAAAACGAGCAAGGAGGATTTGAGTTTTTCATTGTATCTTCTCAGATCACAGACCTCAATGAGAAATTGACAGTCTTTGGTCGAGTTGTGAAGGGACAAGACGTTGTTAAGGAGATCGAGGAGGTTGAGATAGATGAGCATTATCAACCAAAAGCACCAATCGAGATCATGTCCGTCACTTTGCTTCAAGACATGTGA
Protein Sequence
- >Bo3g039630
MERRVANAFPGPGPPPTQVPYYHNNNNNYNPHQIHPSHHHVSAVGFHQYPQNDNRDQRFNQPHFDNQQQPNMIVDAPPLPPSGEFSPCGGGSSLRKRRSLSSSTTPDPSAAADGCIAKLYVAPLPKTAKEDDVRQVFEKYGNVTEIILPRDKMSGERAAYCFVKYRKLEEGNAAIAALTDQYTFPGEMSPVQVRYAGAERERIGVSTVQIPDKLYVRCLNKQTTKTDVHEVFCRFGVIEDIYMAVDDMKVSRGFAFVQFSRKEMALAAIKGLNGVFTMRGSDQPLIVRFADPKRPRLGEPRSNFNASPAMQQFDPNWHPQPYPQWGNKEPAAPRVVDFASQPNHFPQQNAQAVSAFQTPMHQDFEKHQTASVETRSDGQKISSRSNAIHEDQNTEECDWSEHTCPDGNKYYFHCVTFESTWEKPEEYSMFERWFDEQIRLQDQNIAKSQDAIKNTQQDGSTLLQQQSLSTADEENISVYPDKSPDKYFGKENEKKSSPELMAKIKPQALLQQSKKKKGPAPISITSIVIYTLAVLLVVFVLFSAYKRWTLRSEIPTHNGRSLLQDPAFPGVKKNTNLPWFATLDTGKGSVTIELFKDAAPNVVDEFINLSQDGYFKGFLFSRVVKHSVIQAGHSAQFDAVKDWVLQKNSLHTSLKHEEYMVGTPKAKNEQGGFEFFIVSSQITDLNEKLTVFGRVVKGQDVVKEIEEVEIDEHYQPKAPIEIMSVTLLQDM