Information report for A03p000960.1_BraROA
Gene Details
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Functional Annotation
- CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Arabidopsis thaliana: AT5G02840.2, AT5G02840.1, AT5G02840.3
- Brassica napus: GSBRNA2T00049249001, GSBRNA2T00136500001, BnaA10G0294200ZS, BnaC03G0011800ZS, GSBRNA2T00134235001, GSBRNA2T00032337001
- Brassica oleracea: XP_013625291.1, XP_013625292.1, XP_013610517.1, XP_013610518.1, XP_013625293.1, Bo3g002070
- Brassica rapa: Bra005751, XP_009130739.1, XP_009130740.1, XP_009130741.1, Bra009562, XP_009122748.1, XP_009122749.1
Gene Resources
- Pfam: PF00249
Sequences
gDNA Sequence
- >A03p000960.1_BraROA
TGACCTCGTCTCTTTCAAGCAATCCGGTGGTTTCTGAAGAAAGACCGGCGGAAACGTCCACAGATCTTACAGAGACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCTTACACGATCTCCAAGTCCAGACAGAGTTGGACTGAAGGAGAGCACGATAAGTTTCTCGAAGCTCTTCAACTGTAATATAGCTGAAAGTTGCTCCATTTTCTTCTTAGTATGTGACTTAATAATACACTTTGTTGCTGATACTGTTGTCTTGCGTCCTTAGGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTCGGTTCAAAGACAGTTATTCAGGTTTGAGATTAACTGCTTTCGAGTTTTGGTTTATATATTTATACATTGCCACTCACTCAATCTTACTCTGATTTGCTACAGATCAGGAGCCATGCCCAAAAGTACTTTCTGAAGGTAGAGAAAAACGGGACCTTTGCGCACGTGCCACCTCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCAGCTAAGAGTGGTTAGTTTTATTACAAGAAGAGTTTACTTTGGGTGGATAGATGAATTTAACTTTGTTCAATCTAAACTTGTAGCTCAAATGTCGCTTCACGTTTCCATGTCATTTCCTCCAGAAATAAGTAACTTGTCAGGATATGGTTCATGGGATGATGATACCTCTGCATTGCTTAGCATAGCCGTAAGCGAGGTTATACTACCAAAAGATGAGATTGACACTCTTTGTGGAGGAGAAGGCCTGCATTCTCATCTCTACTCAATTTTTTTTTTAAATTTGGTTTGGCAGTTGAGTTACTCCATGTGAAGAAGGTTCATATGCTAAATGCAGCTTGAAAATGTTATTGGTTTCAGTTGTTATTGAATTGAATGGCTCAACAAGTGCGGTTAGTCCTTCAGCATCTGGTATAGGAAGCTCAAGCAGAACTCTACCAGATTCAGAGGGTTTAACACCGGTGAATCAAGCTCCCTCAATGCAGGGTAATTATTTCTGAGTTTTTATTTTATGGTGGAGTTCACTGTTCTAATGGTTGTTTTTTTTCGGCAGGTCTTCCTGATTTTGCTGAAGTTTATAACTTCATTGGGAGTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGTTAAAAGAGATGGATCCTATTAATTTCGAAACTGTGAGTTACAACATGCTTGTTTGCCTTTAGGTTATATGATGTGTGTGACTGTGATACATCCATCATTTAGGCGACTTTTATCTTTATAGTAAGCCTGTCACATAGCTGAATCTAATAGTAGAGGCTGCATTCTGTAGATTTTGTTTCATAAACAAAGTTTGCTTGGTAGTATGGTACCATGATTCTGTGGAGATGTTGAACAACCTTGGTTCAGTATTTTTTTTTTTTTTTTTTAAGTTTCCTGGTGCATTTACGTAGCTGCCAGTTGATTGTTCTTGATATAGTACCCTTGACCAATCGCTGTATGCATGGCAGGTACTGCTATTGATGAGAAACCTCACAGTGAATATGTCAAATCCTGACTTCGAACCTTCTGTAAGTGTTAAAACTTATCATAACTTCCATGCTTGTTAGAAATAAATCTATTTCGTTCTTGGTGTGTTACTTCCTTAAACGTTCCAATGATTAGAGTGAAGATTGTTGTACTTTTTTGAGATCTATATCACACACACTGAAACATATGTAATCTAACCTTGGTATAGTCTGATGCTGCAGAGGAAGGTTCAGAACACTTAAGCTCTTAGCTCTAGTGTGAGATCGCTGGCCAAGAACGAAACAAGTGAATTATCTTTCTTGATGGACTTCTTGCTCACAACAACTGTGTATATCAGCTATAAAGTAAGTGTGGTTTTATACCTCATCCTTCCCACATCAATGTAAACCAGACCTTACCGCATATATAAGCTTTAATCTCTCAGCTGAGCTGCTATAAGGAGTTACCATTGGCTATATGATCTCTCTGTGCATTTGGTGTATTGCGTCACATGGTAGATAAAATTTATAGTGTGTGTAGTAGAAAAATGGGCACCTTGTATTTTCCTATTTGATATATATATTTATTTGTTCATGCGTTTTGTAATTTGTAGTTTTCTTTCCCACTTTAGACGATTGGTTATTTCTGGTCATATATTGATACCAAAGACAATGTCTCAGCTAGAAAATGCAACTAAACCCATAAAAGAGACACATGAGTCAGTTGTATCCCGTTTGTATCAGGCATTAGCTTCCAAGTCATGTCTCAAGCCTTTCTCCTTAACGATAACCGGGAAATTGAACTCAACCCTTTCTCATTAACGATAACCGGGAATCTAGATCGTATTGGTTTGGTTCAAGAGAGTTTTTAAAACCCTCTGGCTCGCTCTGAAGGTTTAGGAAGTGGATTATTATTATTATTCTTATCCAGTGATCCACCGTCGTCGATCTATAAACCGAAAGGAGAAGTCCACTGTCTCTCCGGCGGCGAGGATGCTACAGCATCAGATCGCTCAATCTCCGGCGAGATTAGGCTTAACAACAGGCCCTGGCTCTCCCTCCGTACAAAATCTCACGCCTTCTCGCCATGGCCATCCAACCTCTTCCTCATCCTCCCAATCTCACCACCAACAGATCCTGACGCACCTTCGAAGCCGTTACGGAGCTTCAAGAGATCCTCGATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAGATCCTCGATCTCCAAGACGCAAAGCAGAAGGTCGCGCGTGAGGTCAAATCCAAAGATTCGTCTCTTCTCTCCTTCGCCAACAAACTCAAGGAAGCAGAACGCGTTCTCGCTCTTCGTCCTCTGTTACCACCACAGTTTCTTCTCAGCTCAAGCTGAAGGACATCTTAGCCTACGCTCACAAGATTAGCTACACAACGTTTGCTCCTCCGGAGTTCGGTGCAGGGCAAGCACCTCTCCGCGGCGCGTTGCCGCCAGCGTAGCTTCTCAGCTCTACACCTTCGCTGATCTTGACATCGGTCTACCCAAAACAGTTGAAAACATTGAGAAGAAGGTTGAAGCACTCATCGAGCCGCCGCCACCAGAGAGTATGATGAACCTTTCTGCGATTCAGAACCTGCTTCCACCGAATATCGAGGTTCCATCAGGATGGAAACCAGGAATGCCAGTGGAGTTGCCTAAAGATTGGCCAATGCCACCTCCTGGATGGAAACCAGGAGACCCTGTGGTGATACCGCCTGCACCTAGAGCCCAGGAGCAGCAACAGATGCTGCGGCCTCCTCCTGGACTTCACAGACCGCCTGACGTCATACAGGTCCGAGCTGTTCAGCTCGACATTTTGGAGAGTGATGATAGCAGTGATTACAGCAGCGATGATGCCAGCTCAGATGACGGGGAGTAA
CDS Sequence
- >A03p000960.1_BraROA
ATGACCTCGTCTCTTTCAAGCAATCCGGTGGTTTCTGAAGAAAGACCGGCGGAAACGTCCACAGATCTTACAGAGACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCTTACACGATCTCCAAGTCCAGACAGAGTTGGACTGAAGGAGAGCACGATAAGTTTCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTCGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAGTACTTTCTGAAGGTAGAGAAAAACGGGACCTTTGCGCACGTGCCACCTCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCAGCTAAGAGTGCTCAAATGTCGCTTCACGTTTCCATGTCATTTCCTCCAGAAATAAGTAACTTGTCAGGATATGGTTCATGGGATGATGATACCTCTGCATTGCTTAGCATAGCCGTAAGCGAGGTTATACTACCAAAAGATGAGATTGACACTCTTTTTGTTATTGAATTGAATGGCTCAACAAGTGCGGTTAGTCCTTCAGCATCTGGTATAGGAAGCTCAAGCAGAACTCTACCAGATTCAGAGGGTTTAACACCGGTGAATCAAGCTCCCTCAATGCAGGGTCTTCCTGATTTTGCTGAAGTTTATAACTTCATTGGGAGTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGTTAAAAGAGATGGATCCTATTAATTTCGAAACTGTACTGCTATTGATGAGAAACCTCACAGTGAATATGTCAAATCCTGACTTCGAACCTTCTTCTGATGCTGCAGAGGAAGGCATTAGCTTCCAAGTCATGTCTCAAGCCTTTCTCCTTAACGATAACCGGGAAATTGAACTCAACCCTTTCTCATTAACGATAACCGGGAATCTAGATCGTATTGTGATCCACCGTCGTCGATCTATAAACCGAAAGGAGAAGTCCACTGTCTCTCCGGCGGCGAGGATGCTACAGCATCAGATCGCTCAATCTCCGGCGAGATTAGGCTTAACAACAGGCCCTGGCTCTCCCTCCGTACAAAATCTCACGCCTTCTCGCCATGGCCATCCAACCTCTTCCTCATCCTCCCAATCTCACCACCAACAGATCCTGACGCACCTTCGAAGCCGTTACGGAGCTTCAAGAGATCCTCGATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAGATCCTCGATCTCCAAGACGCAAAGCAGAAGGTCGCGCGTGAGGTCAAATCCAAAGATTCGTCTCTTCTCTCCTTCGCCAACAAACTCAAGGAAGCAGAACGCGTTCTCGCTCTTCGTCCTCTGGCAAGCACCTCTCCGCGGCGCGTTGCCGCCAGCGTAGCTTCTCAGCTCTACACCTTCGCTGATCTTGACATCGGTCTACCCAAAACAGTTGAAAACATTGAGAAGAAGGTTGAAGCACTCATCGAGCCGCCGCCACCAGAGAGTATGATGAACCTTTCTGCGATTCAGAACCTGCTTCCACCGAATATCGAGGTTCCATCAGGATGGAAACCAGGAATGCCAGTGGAGTTGCCTAAAGATTGGCCAATGCCACCTCCTGGATGGAAACCAGGAGACCCTGTGGTGATACCGCCTGCACCTAGAGCCCAGGAGCAGCAACAGATGCTGCGGCCTCCTCCTGGACTTCACAGACCGCCTGACGTCATACAGGTCCGAGCTGTTCAGCTCGACATTTTGGAGAGTGATGATAGCAGTGATTACAGCAGCGATGATGCCAGCTCAGATGACGGGGAGTAA
Protein Sequence
- >A03p000960.1_BraROA
MTSSLSSNPVVSEERPAETSTDLTETTTEAPEKKVRKAYTISKSRQSWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVEKNGTFAHVPPPRPKRKAAHPYPQKAAKSAQMSLHVSMSFPPEISNLSGYGSWDDDTSALLSIAVSEVILPKDEIDTLFVIELNGSTSAVSPSASGIGSSSRTLPDSEGLTPVNQAPSMQGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNMSNPDFEPSSDAAEEGISFQVMSQAFLLNDNREIELNPFSLTITGNLDRIVIHRRRSINRKEKSTVSPAARMLQHQIAQSPARLGLTTGPGSPSVQNLTPSRHGHPTSSSSSQSHHQQILTHLRSRYGASRDPRSQKKKKKKKKRKEILDLQDAKQKVAREVKSKDSSLLSFANKLKEAERVLALRPLASTSPRRVAASVASQLYTFADLDIGLPKTVENIEKKVEALIEPPPPESMMNLSAIQNLLPPNIEVPSGWKPGMPVELPKDWPMPPPGWKPGDPVVIPPAPRAQEQQQMLRPPPGLHRPPDVIQVRAVQLDILESDDSSDYSSDDASSDDGE