Information report for Bo3g002070
Gene Details
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Functional Annotation
- CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Arabidopsis thaliana: AT5G02840.3, AT5G02840.2, AT5G02840.1
- Brassica napus: GSBRNA2T00134235001, BnaC03G0011800ZS, BnaA10G0294200ZS, GSBRNA2T00136500001, GSBRNA2T00049249001
- Brassica rapa: XP_009130740.1, XP_009130741.1, XP_009130739.1, Bra005751, XP_009122749.1, XP_009122748.1, Bra009562
Gene Resources
- Pfam: PF00249
- UniProt: A0A0D3AZH2
- AlphaFoldDB: A0A0D3AZH2
- OMA: PNDEIDT
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF119
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 109376.A0A0D3AZH2
- HOGENOM: CLU_052430_0_0_1
Sequences
gDNA Sequence
- >Bo3g002070
TGACCTCGTCTCTTTCAAGCAATCCGGTGGTTGCTGAAGAAAGACCGGCGGAAACATCCACAGATCTTACAGATACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCTTACACGATATCCAAGTCCAGACAGAGTTGGACTGAAGGAGAGCACGATAAGTTTCTCGAAGCTCTTCAACTGTAATATAGCTGAAAAGTTGCTATCTTTCTTCTTAGTATGTGACTTAATTATACACTTTGTTGCTGATACTACTTACACTGTTGTCTTGCGTCTTTAGGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTCGGCTCAAAGACAGTTATTCAGGTTTTGAGATCAACTGCTTTGTGTTTTGGTTTATATAATTATATACATTGGCACTCAACTTGATTGGCTACAGATCAGGAGCCATGCCCAAAAGTACTTTTTGAAGGTCCAGAAAAACGGAACCTTTGCGCACGTGCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCTAAGAATGGTTAGTTTTATTACAAGAAGAGTTTACTTTGGGTGGACAGATGAAGTTTGTTCAATCTGAACTTGCAGCTCAAATGTCGCTTCACGTTTCCATGTCATTTCCTCCAGAAATAAGTAACGTGTCCGGATATGGTTCATGGGATGATGATACCTCTGCATTGCTTAGCATAGCCGTTAGCGAGGTTATACTACCAAATGATGAGATTGACACTCTTTGTGGAGGAGAAGGCATGCATTCTCATCTCTACTCAATTTTTTTTTTTAATTTTGTTTGGCAGTTGAGTTACTCCATGTGAAGAAGGTTCATATGCTAAACGCAGCTTGAAAATGTTATTGGTTTCAGTTGTTATTGAATCGAATGGCTCAGCAAGTGCGGTTAGTCCTTCAGCATCTGGTATAGGAAGCTCAAGCAGAACTCTATCAGGTTCAGAGGGTTTAAGACCGGTGAATCAAGCTCCCTCACTGAAGGGTAATTATCTCCCGGACTGTTTCTGAGTTTTCGTTTTATGGTGGAGGTCACTGTTCTAATGGTTGTTTTCTGGCAGGTCTTCCTGATTTTGCTGAAGTTTATAACTTCATTGGGAGTGTCTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTGAGTTACAACATGCTTGTTTGCCTTTAGGCTGTACGATGTGTGGGACTTTGATACATCCATCATTTAGACGACTTTTATCTTTATAGTACGCCTGTCACATAGCTGAATCTAATAGTAAAGGCTGCATTCTGTAGATTTTGTTTCATAAACAAAGTTTGCTTGGTAGTATGGTACCATGATTCTGTGGAGATGTTGGCCAAATAAACAACCTTGGTTCAGTGTTTTCTTTTTTAAGTTTCCTGGTGCATATACGTAGCTGCCAGTTGATTGTTCTTGATATAGTACCCTTGACTAATCGCTGTATGCATGGCAGGTACTGCTATTGATGAGAAACCTCACAGTGAATATGTCAAATCCTGACTTCGAACCTTCTGTAAGTGTTAAAACTTATCATAACTTCCATGCTTGTTACATAAGTCTCTTTCGCTCTTGATGTGTGTTACTTCTTTAAACATTCCAATGATTAAAATGAGGACTGTTGTGCTTTCTGAGACGTATATTACACACTTTGAAACAGATGTAATCTAACCTTGATATAGTCTGATGCTGCAGAGGAAGGTTCAGAACACTTAA
CDS Sequence
- >Bo3g002070
ATGACCTCGTCTCTTTCAAGCAATCCGGTGGTTGCTGAAGAAAGACCGGCGGAAACATCCACAGATCTTACAGATACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCTTACACGATATCCAAGTCCAGACAGAGTTGGACTGAAGGAGAGCACGATAAGTTTCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTCGGCTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAGTACTTTTTGAAGGTCCAGAAAAACGGAACCTTTGCGCACGTGCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCTAAGAATGAAATAAGTAACGTGTCCGGATATGGTTCATGGGATGATGATACCTCTGCATTGCTTAGCATAGCCGTTAGCGAGGTTATACTACCAAATGATGAGATTGACACTCTTTGTGGAGGAGAAGTTGTTATTGAATCGAATGGCTCAGCAAGTGCGGTTAGTCCTTCAGCATCTGGTATAGGAAGCTCAAGCAGAACTCTATCAGGTTCAGAGGGTTTAAGACCGGTGAATCAAGCTCCCTCACTGAAGGGTCTTCCTGATTTTGCTGAAGTTTATAACTTCATTGGGAGTGTCTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTACTGCTATTGATGAGAAACCTCACAGTGAATATGTCAAATCCTGACTTCGAACCTTCTAGGAAGGTTCAGAACACTTAA
Protein Sequence
- >Bo3g002070
MTSSLSSNPVVAEERPAETSTDLTDTTTEAPEKKVRKAYTISKSRQSWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTFAHVPPPRPKRKAAHPYPQKASKNEISNVSGYGSWDDDTSALLSIAVSEVILPNDEIDTLCGGEVVIESNGSASAVSPSASGIGSSSRTLSGSEGLRPVNQAPSLKGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNMSNPDFEPSRKVQNT