Information report for Bra009562
Gene Details
Functional Annotation
- CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Arabidopsis thaliana: AT5G02840.3, AT5G02840.2, AT5G02840.1
- Brassica napus: GSBRNA2T00136500001, BnaA10G0294200ZS, GSBRNA2T00032337001, GSBRNA2T00049249001
- Brassica oleracea: XP_013610517.1, XP_013610518.1, XP_013625291.1, XP_013625292.1
Gene Resources
- Pfam: PF00249
Sequences
gDNA Sequence
- >Bra009562
TACTTGATAGCTGATAGACAGTTGTTGTGAGCAAGAAGTTCCCCAAGAAGATATATCACTTGTTTGGTTCTTGACCAGGGGTCCCGCACTGCCCTGCTAAGAGCTTAATTGTTCAGGACCTTCCCCTGCAGCATCAGAGTATTCAGACTATTTCAAGGTTAAATTACATTTGTTGCAATAATCCAGAAGTCAGTAGTTCATGTGCCTAACGAGCATGAACACAAACCAAGATAGAAATAGACTTATTTCCAACGAGCATGGAAGTTATGATCAACGTAACACTTACAGCAGGTTCGAAGTCAGGGTTTGACAAGTTCACTGTGAGGTTTCTCATCAATAGCAGAACCTGCAAGGCATACTGCGATTAGTGAAGGGTACTCAAGGAGAACGCAGAGTTCAAGACACGCTTAAATGATGAATATATTACTGTCACACACATGATTTTACTTAAAAAGGCAATCAAGCAGGTTCTAACTCACAGTTTCGAAATTAATAGGATCCATTTCCTTGAGTTTTTTCATGCGGCCTTTGCTGTCAGGATCGAACACACTCCCAATGAAGTTATAAACTTCAGCAAAATCAGGAAGACCTGCAAAAACTACCAATTAGAACAATGTCTACCATAAAATAAAAGCTCAAGAAGTAGTTTCCACAATTGTTTGAATAATCACCGTGCATTGAGGGAGCTTGATTCGCCGTTTTGGAATCAGATAGTGTTCTGCTTGAGCTTCCTATACCAGATGCTGAAGGACTACCCCCACTTGTTGACCCATTCGATTCAATAACATCTGAAACAAATAACATATTTAGCATATGAACCTTCATCATGTGGAGAAACTCAAATGCCAAGCAAAATACAAAAAAAAAAAAAAAGAGTACAAATGAGAAAGCATGCCTTCTCCTCCTCCACAAAGAGTAGTAAGTTCATCTTTTGGTAGAATAACCTCGCTTACGGCTATGTTAAGCAATGCAGAGGTATCATCATCCCATGAAGTGAATCCAGGCACGTTATTTATTTGAGTAGGAAAGGACATTGAAACATGAAGCGACATTTGAGCTGCAAACAATTGAGTTTTTAGTTCAGATCCGACTCAATGTAATTTCTAATCATAATAGAACTAACCATTCTTCGATGCCTTTTGAGGATAAGGATGAGCAGCTTTGCGTTTAGGCCTAGGAGGTGGCACGTGTGCTAAAGTCCCGTTTTTCTGGACCTTCAAAAAGTATTTTTGCGCATGGCTCCTGATCTGTTGTAAATCAAGTAGGCACATTAAGACTGTGTGGAGAAACACGCCAATGTATTTTATTACTAAAACCAAAATCGAAAGCAGCTGGATCTCAAACCTGAATAACTGTCTTTGAACCAACAAAATCTTCAATCTTTTTCCAGTCACGATCAAACCTAAGAACCGCAAGAGAATTGTCAGATACCAGTAAGTAGTATCAGCAACAAAGTGTCTGAATAAAAGACATAGGCTTTTGCAATAAAAATTCATTAATTAAGGAAAACCACTTGCTAAATCCTCTACTGAAACATGTTGACAACGTAAGATGACAAAGTAGCTTCTGCAAAATCCCAATTAACATTCATCTGACACGCAAAAATCTAGATGATCTACTACATAACCAGACCAAAAATACAAACTTTTGTCTGATTAGTGTATTAAGCACAGACTAAGAAGAAATGAAGCAAATTTAAGCAGATTCAACTACAATTAGAGCTCAGGACGACACGAATTCAGCAAACCAAATCCAAAGGTAGAAGAAGAGAGAAAGAGATTTTTACAATTGAAGAGCTTCGAGGAACTTATCGTGCTCTCCTTCCGTCCAACTCTCTCTGGACTTAGTGATCGTGTAGGCTTTCCTCACCTTCTTCTCCGGAGCTTCCGTCGTCGTTGTCTCTATAAGATCTGTTGACGTTTCCATCGGTCTTTCTTCTTCAGCGACCATCGGATTGCTTGAAAGCGACGAAGTCAT
CDS Sequence
- >Bra009562
ATGACTTCGTCGCTTTCAAGCAATCCGATGGTCGCTGAAGAAGAAAGACCGATGGAAACGTCAACAGATCTTATAGAGACAACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCCTACACGATCACTAAGTCCAGAGAGAGTTGGACGGAAGGAGAGCACGATAAGTTCCTCGAAGCTCTTCAATTGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTTGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCGCAAAAATACTTTTTGAAGGTCCAGAAAAACGGGACTTTAGCACACGTGCCACCTCCTAGGCCTAAACGCAAAGCTGCTCATCCTTATCCTCAAAAGGCATCGAAGAATGCTCAAATGTCGCTTCATGTTTCAATGTCCTTTCCTACTCAAATAAATAACGTGCCTGGATTCACTTCATGGGATGATGATACCTCTGCATTGCTTAACATAGCCGTAAGCGAGGTTATTCTACCAAAAGATGAACTTACTACTCTTTATGTTATTGAATCGAATGGGTCAACAAGTGGGGGTAGTCCTTCAGCATCTGGTATAGGAAGCTCAAGCAGAACACTATCTGATTCCAAAACGGCGAATCAAGCTCCCTCAATGCACGGTCTTCCTGATTTTGCTGAAGTTTATAACTTCATTGGGAGTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAACTCAAGGAAATGGATCCTATTAATTTCGAAACTGTTCTGCTATTGATGAGAAACCTCACAGTGAACTTGTCAAACCCTGACTTCGAACCTGCTGCACATGAACTACTGACTTCTGGATTATTGCAACAAATGGCAGTGCGGGACCCCTGGTCAAGAACCAAACAAGTGATATATCTTCTTGGGGAACTTCTTGCTCACAACAACTGTCTATCAGCTATCAAGTAA
Protein Sequence
- >Bra009562
MTSSLSSNPMVAEEERPMETSTDLIETTTTEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNVPGFTSWDDDTSALLNIAVSEVILPKDELTTLYVIESNGSTSGGSPSASGIGSSSRTLSDSKTANQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEPAAHELLTSGLLQQMAVRDPWSRTKQVIYLLGELLAHNNCLSAIK