Gene Details:
- MSU gene ID: LOC_Os02g58730
- RAPdb gene ID: Os02g0834000
- Gene Symbol: OsRacD OsRac5
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Evidence from RT-PCR study indicates that OsRacD gene is related to photoperiod fertility conversion of photoperiod sensitive genic male sterility (PSGMS) rice.
- OsRac5 belongs to the rice Rho of plants family, and acts as the molecular switch in the signal pathway which is pivotally involved in the rice fertility control.
- Our results suggest that OsMY1 is an important target of OsRac5 and that these two genes are involved in the same biological processes in rice growth and development.
- Real-time PCR shows that OsMY1 and OsRac5 are coordinately expressed in rice leaves and panicles with similar expression patterns.
- The OsRacD gene correlated with fertility transformation in the photoperiod sensitive genic male sterile rice (PGMR), Nongken 58S, encoded a rice (Oryza sativa L.
- By screening cDNA library of the rice Nongken 58N panicle using the newly obtained fragment RDP-8 as probe, we further found the full-length cDNA of OsRacD gene that encodes a rice small GTP-binding protein.
Function-related keywords:
Literature:
- Structural analysis and identification of cis-elements of rice osRACD gene . DOI: 10.1093/abbs/36.3.191 ; PMID: 15202503
- Isolation ofosRACD gene encoding a small GTP-binding protein from rice . DOI: 10.1007/BF03183306
- Isolation and characterization of OsMY1, a putative partner of OsRac5 from Oryza sativa L . DOI: 10.1007/s11033-014-3032-x ; PMID: 24464125
Related News:
Gene Resources:
- NCBI ID: AF329814
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g58730.1
GGTTCGCCTTCCTAGTTCCTACCCCCACCAGCAAGCAGCAGCTGAGGTGAGGTCCGTGGCGTTGGAGTGAGGACTGAGGAGGAAGAAGAGGGCGGGATCTAGGGTACCGGATGCGCTGGCTGTGCTGAGTGAGAGTAGAGATGAGCGCGTCTCGGTTCATCAAGTGCGTCACCGTGGGGGACGGCGCCGTGGGCAAGACCTGCATGCTCATCTCCTACACCTCCAACACCTTCCCCACGGACTATGTTCCAACTGTTTTTGATAACTTCAGTGCAAATGTTGTGGTCGATGGGAGCACTGTGAACTTGGGGTTGTGGGATACAGCAGGACAAGAGGACTACAATAGGCTACGCCCGTTGAGCTATCGTGGCGCTGATGTTTTCCTGCTGGCCTTTTCTCTGATCAGCAAAGCAAGCTATGAGAATGTTTCTAAAAAGTGGATACCTGAATTAAGGCATTATGCTCCTGGTGTGCCAATAATTCTCGTTGGAACAAAGCTTGATCTGCGGGATGATAAGCAATTTTTCGTAGATCACCCTGGTGCTGTACCTATTTCCACTGCTCAGGGCGAAGAGCTGAGGAAACTCATTGGTGCAGCGGCATACATTGAATGCAGTTCAAAAACACAGCAAAACATCAAGGCAGTTTTCGATGCTGCGATTAAGGTGGTTCTCCAGCCTCCAAAGCAAAAGAAGAAGAAGAAAAAGGCGCAGAAAGGATGTGCCATCTTGTAATTAAATGGTAGACAGTGCAGTGCAGATCGATGTATCCCTTCATTTGTAGCCTCTGGCTTCAATCGTCGCTTGTTTGTATAATTACGCTAGATGCCACCGGCAGAAGATATAATATAGTCCTCCTGCCTTTGTGGTGTTGGTCTCTAAGGTCGTCCAGACTCCAGAGTCCAGACGCATTTGGTTTCTTTTGTTCTATCTATAATCAATCTATCTATATCTGCTAGTGTTGTGCTTCTGCTAGTTATGCGGATGAGAAAGGGAATTTACCTTCCCTGTTTCTGGGCTTCTGGCTTGCACGGGAAAGGTCGGTTTGTTTGCAATATACTACTACCACTCCAGCTTGCTAGGTTGATTAAAATAAGCTACCAGTAAGAATCGATATGACGTATCAGCATTTTATTAAATCAGTGATTAATTTTATC - >LOC_Os02g58730.2
GGTTCGCCTTCCTAGTTCCTACCCCCACCAGCAAGCAGCAGCTGAGGTGAGGTCCGTGGCGTTGGAGTGAGGACTGAGGAGGAAGAAGAGGGCGGGATCTAGGGTACCGGATGCGCTGGCTGTGCTGAGTGAGAGTAGAGATGAGCGCGTCTCGGTTCATCAAGTGCGTCACCGTGGGGGACGGCGCCGTGGGCAAGACCTGCATGCTCATCTCCTACACCTCCAACACCTTCCCCACGGACTATGTTCCAACTGTTTTTGATAACTTCAGTGCAAATGTTGTGGTCGATGGGAGCACTGTGAACTTGGGGTTGTGGGATACAGCAGGACAAGAGGACTACAATAGGCTACGCCCGTTGAGCTATCGTGGCGCTGATGTTTTCCTGCTGGCCTTTTCTCTGATCAGCAAAGCAAGCTATGAGAATGTTTCTAAAAAGTGGATACCTGAATTAAGGCATTATGCTCCTGGTGTGCCAATAATTCTCGTTGGAACAAAGCTTGATCTGCGGGATGATAAGCAATTTTTCGTAGATCACCCTGGTGCTGTACCTATTTCCACTGCTCAGGGCGAAGAGCTGAGGAAACTCATTGGTGCAGCGGCATACATTGAATGCAGTTCAAAAACACAGCAAAACATCAAGGCAGTTTTCGATGCTGCGATTAAGGTGGTTCTCCAGCCTCCAAAGCAAAAGAAGAAGAAGAAAAAGGCGCAGAAAGGATGTGCCATCTTGTAATTAAATGGTAGACAGTGCAGTGCAGATCGATGTATCCCTTCATTTGTAGCCTCTGGCTTCAATCGTCGCTTGTTTGTATAATTACGCTAGATGCCACCGGCAGAAGATATAATATAGTCCTCCTGCCTTTGTGGTGTTGGTCTCTAAGGTCGTCCAGACTCCAGAGTCCAGACGCATTTGGTTTCTTTTGTTCTATCTATAATCAATCTATCTATATCTGCTAGTGTTGTGCTTCTGCTAGTTATGCGGATGAGAAAGGGAATTTACCTTCCCTGTTTCTGGGCTTCTGGCTTGCACGGGAAAGGTCGGTTTGTTTGCAATATACTACTACCACTCCAGCTTGCTAGGTTGATTAAAATAAGCTACCAGTAAGAATCGATATGACGTATCAGCATTTTATTAAATCAGTGATTAATTTTATC
CDS Sequence
- >LOC_Os02g58730.1
ATGAGCGCGTCTCGGTTCATCAAGTGCGTCACCGTGGGGGACGGCGCCGTGGGCAAGACCTGCATGCTCATCTCCTACACCTCCAACACCTTCCCCACGGACTATGTTCCAACTGTTTTTGATAACTTCAGTGCAAATGTTGTGGTCGATGGGAGCACTGTGAACTTGGGGTTGTGGGATACAGCAGGACAAGAGGACTACAATAGGCTACGCCCGTTGAGCTATCGTGGCGCTGATGTTTTCCTGCTGGCCTTTTCTCTGATCAGCAAAGCAAGCTATGAGAATGTTTCTAAAAAGTGGATACCTGAATTAAGGCATTATGCTCCTGGTGTGCCAATAATTCTCGTTGGAACAAAGCTTGATCTGCGGGATGATAAGCAATTTTTCGTAGATCACCCTGGTGCTGTACCTATTTCCACTGCTCAGGGCGAAGAGCTGAGGAAACTCATTGGTGCAGCGGCATACATTGAATGCAGTTCAAAAACACAGCAAAACATCAAGGCAGTTTTCGATGCTGCGATTAAGGTGGTTCTCCAGCCTCCAAAGCAAAAGAAGAAGAAGAAAAAGGCGCAGAAAGGATGTGCCATCTTGTAA - >LOC_Os02g58730.2
ATGAGCGCGTCTCGGTTCATCAAGTGCGTCACCGTGGGGGACGGCGCCGTGGGCAAGACCTGCATGCTCATCTCCTACACCTCCAACACCTTCCCCACGGACTATGTTCCAACTGTTTTTGATAACTTCAGTGCAAATGTTGTGGTCGATGGGAGCACTGTGAACTTGGGGTTGTGGGATACAGCAGGACAAGAGGACTACAATAGGCTACGCCCGTTGAGCTATCGTGGCGCTGATGTTTTCCTGCTGGCCTTTTCTCTGATCAGCAAAGCAAGCTATGAGAATGTTTCTAAAAAGTGGATACCTGAATTAAGGCATTATGCTCCTGGTGTGCCAATAATTCTCGTTGGAACAAAGCTTGATCTGCGGGATGATAAGCAATTTTTCGTAGATCACCCTGGTGCTGTACCTATTTCCACTGCTCAGGGCGAAGAGCTGAGGAAACTCATTGGTGCAGCGGCATACATTGAATGCAGTTCAAAAACACAGCAAAACATCAAGGCAGTTTTCGATGCTGCGATTAAGGTGGTTCTCCAGCCTCCAAAGCAAAAGAAGAAGAAGAAAAAGGCGCAGAAAGGATGTGCCATCTTGTAA
Protein Sequence
- >LOC_Os02g58730.1
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQPPKQKKKKKKAQKGCAIL* - >LOC_Os02g58730.2
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQPPKQKKKKKKAQKGCAIL*