Information report for AT1G06400
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- Involvement of the xyloglucan endotransglycosylase/hydrolases encoded by celery XTH1 and Arabidopsis XTH33 in the phloem response to aphids. DOI: 10.1111/j.1365-3040.2006.01618.x ; PMID: 17238910
- Wall-modifying genes regulated by the Arabidopsis homolog of trithorax, ATX1: repression of the XTH33 gene as a test case. DOI: 10.1111/j.1365-313X.2009.03798.x ; PMID: 19154201
- Light quality-mediated petiole elongation in Arabidopsis during shade avoidance involves cell wall modification by xyloglucan endotransglucosylase/hydrolases. DOI: 10.1104/pp.110.162057 ; PMID: 20688978
- Cell wall hemicellulose contributes significantly to aluminum adsorption and root growth in Arabidopsis. DOI: 10.1104/pp.111.172221 ; PMID: 21285327
- Group III-A XTH genes of Arabidopsis encode predominant xyloglucan endohydrolases that are dispensable for normal growth. DOI: 10.1104/pp.112.207308 ; PMID: 23104861
- Function of xyloglucan endotransglucosylase/hydrolases in rice. DOI: 10.1093/aob/mct292 ; PMID: 24363334
- Xyloglucan Endotransglucosylase-Hydrolase17 Interacts with Xyloglucan Endotransglucosylase-Hydrolase31 to Confer Xyloglucan Endotransglucosylase Action and Affect Aluminum Sensitivity in Arabidopsis. DOI: 10.1104/pp.114.243790 ; PMID: 24948835
- Xyloglucan endotransglucosylase/hydrolases (XTHs) are inactivated by binding to glass and cellulosic surfaces, and released in active form by a heat-stable polymer from cauliflower florets. DOI: 10.1016/j.jplph.2017.07.022 ; PMID: 28822306
Gene Resources
- UniProt: A0A178W910
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178W910
- EnsemblPlants: AT1G06400.1
- Gramene: AT1G06400.1
- KEGG: ath:AT1G06400
- Orthologous matrix: GMERFRC
- ExpressionAtlas: AT1G06400
- InterPro: IPR001806, IPR005225, IPR027417
- PANTHER: PTHR47979
- SUPFAM: SSF52540
- PROSITE: PS51419, PS51420, PS51421
- Gene3D: 3.40.50.300
- OrthoDB: A0A178W910
- SWISS-MODEL: A0A178W910
- Conserved Domain Database: cd01868
Homologs
- Actinidia chinensis Achn273391
- Daucus carota DCAR_019583
- Fragaria vesca mrna29786.1-v1.0-hybrid
- Gossypium hirsutum Gh_A09G1177
- Lupinus albus Lalb_Chr04g0259661
- Malus domestica MDP0000180376
- Oryza sativa OsRab11, OsRab11C1, RGP1, OsPRA2
- Raphanus raphanistrum RrC3821_p1
- Sesamum indicum SIN_1023555
- Solanum lycopersicum Solyc04g012180.3
Sequences
cDNA Sequence
- >AT1G06400.1
ATCATCTTTTTAAAAATTTAAACTTTTTCTGTTCAAAAACAAAAAGAAGAAGAAAAAAGGGTGATTTAGAGCCAACCCGACAAAAGCTTTCATCGTCATCATCTGAATCATTAATTCATTATCATCAAATAATACAGCAGCAAGCAACACAGTAAAACCCAATTCCCTAATCCCAAAATTCGATCTCTCATCTGATGGCTGGTTACAGAGCCGATGAAGAGTACGATTACCTCTTCAAGCTCGTGTTGATCGGCGACTCTGGTGTCGGCAAATCGAATCTGCTCTCTCGGTTCACCAAGAACGAGTTCAATCTCGAATCCAAGTCTACTATTGGTGTTGAGTTCGCTACCAAAACCACTAAAGTCGAAGGCAAAGTCGTCAAAGCTCAGATTTGGGATACTGCTGGTCAAGAGAGATACCGAGCAATCACAAGCGCTTATTACAGAGGAGCTGTTGGTGCTTTGCTTATTTACGACGTGACAAGGCACGCAACATTTGAGAATGCAGCAAGATGGCTAAGGGAACTAAGAGGACACACAGACCCAAACATAGTGGTGATGCTTATAGGGAACAAGTGCGATCTGCGTCACTTGGTGGCAGTCAAAACAGAAGAGGCTAAAGCCTTTGCTGAGAGAGAATCCCTCTATTTCATGGAGACTTCAGCTCTAGACGCAACCAATGTTGAAAACGCATTCACGGAAGTGCTCACTCAGATCCACAAGATAGTGAGCAAAAGAAGTGTTGATGGAGGAGGAGAGTCGGCTGATTTACCGGGAAAAGGAGAGACGATAAACGTTAAAGAAGACGGATCGGTTCTTAAGAGAATGGGTTGCTGCTCTAACTAGAGTGGGGGGATTGTAGATTTGGCTTGATTTGGTTAGGGTGAGACAACAAATGATAATCTCTTTGGGTCTTGCAATCAAAAAAGAAATAAGAAACGATTACTTTTAAGATCATGTGTATGCTTTGGTAACTTTGGCCTGTAAGGTCCTTTAAAATTTAAGTACATGATTGGTAATTTGTTTTCAACACTCCCACCACTTGTAATTTGTAAACTTGTAATAAACTGAAGAAATGCAAATCATCACCTACGTAACATTTCGAAAATAGATCTAGCGACTTTTAATTTAAGAGGATGATTATTTATCCCTCTAGTCTTTTGTGTTGAGAGAAGAAAACAAAAAAACATCTGTAGCTAATCTTTTGGACATGACATGGTTTAATATTATCACCTCGTTTTTCTTTTGTCTCTACGTATCTGTCAGAATTGTTTTACAGACAAAAACATATACAAAAATACACGAGGAACAGTGTCTCTCTCCACTCTCCAGGCTACGG
CDS Sequence
- >AT1G06400.1
ATGGCTGGTTACAGAGCCGATGAAGAGTACGATTACCTCTTCAAGCTCGTGTTGATCGGCGACTCTGGTGTCGGCAAATCGAATCTGCTCTCTCGGTTCACCAAGAACGAGTTCAATCTCGAATCCAAGTCTACTATTGGTGTTGAGTTCGCTACCAAAACCACTAAAGTCGAAGGCAAAGTCGTCAAAGCTCAGATTTGGGATACTGCTGGTCAAGAGAGATACCGAGCAATCACAAGCGCTTATTACAGAGGAGCTGTTGGTGCTTTGCTTATTTACGACGTGACAAGGCACGCAACATTTGAGAATGCAGCAAGATGGCTAAGGGAACTAAGAGGACACACAGACCCAAACATAGTGGTGATGCTTATAGGGAACAAGTGCGATCTGCGTCACTTGGTGGCAGTCAAAACAGAAGAGGCTAAAGCCTTTGCTGAGAGAGAATCCCTCTATTTCATGGAGACTTCAGCTCTAGACGCAACCAATGTTGAAAACGCATTCACGGAAGTGCTCACTCAGATCCACAAGATAGTGAGCAAAAGAAGTGTTGATGGAGGAGGAGAGTCGGCTGATTTACCGGGAAAAGGAGAGACGATAAACGTTAAAGAAGACGGATCGGTTCTTAAGAGAATGGGTTGCTGCTCTAACTAG
Protein Sequence
- >AT1G06400.1
MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCSN