Information report for AT3G45960
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
Literature and News
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth. DOI: 10.1105/tpc.106.045658 ; PMID: 17220200
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Gene Resources
- UniProt: B9DH60
- EMBL: AK317407
- AlphaFoldDB: B9DH60
- EnsemblPlants: AT3G45960.2
- Gramene: AT3G45960.2
- KEGG: ath:AT3G45960
- Orthologous matrix: RIPCEYS
- ExpressionAtlas: AT3G45960
- InterPro: IPR007112, IPR007117, IPR007118
- PANTHER: PTHR31692, PTHR31692:SF4
- SUPFAM: SSF49590, SSF50685
- PROSITE: PS50842, PS50843
- Gene3D: 2.40.40.10, 2.60.40.760
- SWISS-MODEL: B9DH60
- Conserved Domain Database: cd22276
Homologs
Sequences
cDNA Sequence
- >AT3G45960.2
TCATCATTCATCATACTATATTATATAATCCATTCTTTGTCCTCTCTTCTCTTTACATGTAAATTCACATATCTCTCTAATTTGCTCACTAGATATTATTTCTTTCCTCTTGAAAAGTCCAAAAATGAGAAGCTTTCTCTACCTCATCGTAGTCATCTTCCTCTTCTCTTCATCCGTTAACGCTTGTGATCGATGTCTACACCGTTCTAAAGCATCTTATTTCTCCTCTGCTTCTGCTCTCTCTTCCGGGGCTTGTGCCTATGGCCCTATGGCTACGAGCTTCTTTGCCGGCCACATTGCGGCCGCTATACCTTCCATTTACAAAGATGGTGCTGGCTGTGGAGCTTGCTTTCAAGTCAGATGCAAGAACCCCAAGTTGTGTAACAGTAAAGGAACCATTGTGATGGTCACAGACTTGAACACGAGCAACCAAACTGATCTTGTCCTTAGTAGTAGAGCTTTTAGGGCTATGGCTAAGCCTGTTGTTGGTGTTGACAAATACCTTCTCAAACAAGGCATCGTCGACGTTGAATACCAAAGAGTTCCTTGCAATTACGGTAAAAGGAATTTGAACGTGAGAGTGGAAGAAGCAAGCAAAAAGCCAAATTACTTGGCGATAAAGCTATTGTACCAAGGAGGTCAAACCGAAGTGGTAGGTATCGACATTGCTCCAGTAGGTTCGTCACAATGGAGTTACATGAGTAGAAGCCACGGAGCCGTTTGGGCGACCGATAAAGTACCAACGGGAGCTCTACAGTTCAAGTTCACGGTGACAGGCGGCTACGATGGCAAAACGGTTTGGTCAAAGAGGGTTCTTCCGGCGAATTGGAACTCTGGGAGGATTTATGATGCCGGCGTTCAGATCACCGACATTGCTCAAGAAGGTTGTGATACATGCGGTCACATATGGAACTGACTCATTACAATTCTCCTTATTTAGGCAAACAACAAACAAACACCCTTTATAGGATATATACATGTATGTGTAACAGAGTTCATTATTTAATGAGTTGAAGAATTCACAACAGGAGTGGCTTATATAATCTGGATTAAACAAAAGAACTAGAGAGTAAAGGTCATGCTAAAAGCTAGAGTCCATGTCACCAAAAAAAACAAGAAAAACAAAAAATGTCACTTATCATTGCAAGCAAGAATCCGACAAGAAAAAAAAAACATATCTTAGAGATGTCTAACAATTGGAAAACAATAATGTATGGAAAGGTTTAAGATAGGTCAAAGAAGAAACTGTTGTGTCTTTATATAAATTAGTAAGGAAACAT - >AT3G45960.1
TCATCATTCATCATACTATATTATATAATCCATTCTTTGTCCTCTCTTCTCTTTACATGTAAATTCACATATCTCTCTAATTTGCTCACTAGATATTATTTCTTTCCTCTTGAAAAGTCCAAAAATGAGAAGCTTTCTCTACCTCATCGTAGTCATCTTCCTCTTCTCTTCATCCGTTAACGCTTGTGATCGATGTCTACACCGTTCTAAAGCATCTTATTTCTCCTCTGCTTCTGCTCTCTCTTCCGGGGCTTGTGCCTATGGCCCTATGGCTACGAGCTTCTTTGCCGGCCACATTGCGGCCGCTATACCTTCCATTTACAAAGATGGTGCTGGCTGTGGAGCTTGCTTTCAAGTCAGATGCAAGAACCCCAAGTTGTGTAACAGTAAAGGAACCATTGTGATGGTCACAGACTTGAACACGAGCAACCAAACTGATCTTGTCCTTAGTAGTAGAGCTTTTAGGGCTATGGCTAAGCCTGTTGTTGGTGTTGACAAATACCTTCTCAAACAAGGCATCGTCGACGTTGAATACCAAAGAGTTCCTTGCAATTACGGTAAAAGGAATTTGAACGTGAGAGTGGAAGAAGCAAGCAAAAAGCCAAATTACTTGGCGATAAAGCTATTGTACCAAGGAGGTCAAACCGAAGTGGTAGGTATCGACATTGCTCCAGTAGGTTCGTCACAATGGAGTTACATGAGTAGAAGCCACGGAGCCGTTTGGGCGACCGATAAAGTACCAACGGGAGCTCTACAGTTCAAGTTCACGGTGACAGGCGGCTACGATGGCAAAACGGTTTGGTCAAAGAGGGTTCTTCCGGCGAATTGGAACTCTGGGAGGATTTATGATGCCGGCGTTCAGATCACCGACATTGCTCAAGAAGGTTGTGATACATGCGGTCACATATGGAACTGACTCATTACAATTCTCCTTATTTAGGCAAACAACAAACAAACACCCTTTATAGGATATATACATGTATGTGTAACAGAGTTCATTATTTAATGAGTTGAAGAATTCACAACAGGAGTGGCTTATATAATCTGGATTAAACAAAAGAACTAGAGAGTAAAGGTCATGCTAAAAGCTAGAGTCCATGTCACCAAAAAAAACAAGAAAAACAAAAAATGTCACTTATCATTGCAAGCAAGAATCCGACAAGAAAAAAAAAACATATCTTAGAGATGTCTAACAATTGGAAAACAATAATGTATGGAAAGGTTTAAGATAGGTCAAAGAAGAAACTGTTGTGTCTTTATATAAATTAGTAAGGAAACAT
CDS Sequence
- >AT3G45960.2
ATGAGAAGCTTTCTCTACCTCATCGTAGTCATCTTCCTCTTCTCTTCATCCGTTAACGCTTGTGATCGATGTCTACACCGTTCTAAAGCATCTTATTTCTCCTCTGCTTCTGCTCTCTCTTCCGGGGCTTGTGCCTATGGCCCTATGGCTACGAGCTTCTTTGCCGGCCACATTGCGGCCGCTATACCTTCCATTTACAAAGATGGTGCTGGCTGTGGAGCTTGCTTTCAAGTCAGATGCAAGAACCCCAAGTTGTGTAACAGTAAAGGAACCATTGTGATGGTCACAGACTTGAACACGAGCAACCAAACTGATCTTGTCCTTAGTAGTAGAGCTTTTAGGGCTATGGCTAAGCCTGTTGTTGGTGTTGACAAATACCTTCTCAAACAAGGCATCGTCGACGTTGAATACCAAAGAGTTCCTTGCAATTACGGTAAAAGGAATTTGAACGTGAGAGTGGAAGAAGCAAGCAAAAAGCCAAATTACTTGGCGATAAAGCTATTGTACCAAGGAGGTCAAACCGAAGTGGTAGGTATCGACATTGCTCCAGTAGGTTCGTCACAATGGAGTTACATGAGTAGAAGCCACGGAGCCGTTTGGGCGACCGATAAAGTACCAACGGGAGCTCTACAGTTCAAGTTCACGGTGACAGGCGGCTACGATGGCAAAACGGTTTGGTCAAAGAGGGTTCTTCCGGCGAATTGGAACTCTGGGAGGATTTATGATGCCGGCGTTCAGATCACCGACATTGCTCAAGAAGGTTGTGATACATGCGGTCACATATGGAACTGA - >AT3G45960.1
ATGAGAAGCTTTCTCTACCTCATCGTAGTCATCTTCCTCTTCTCTTCATCCGTTAACGCTTGTGATCGATGTCTACACCGTTCTAAAGCATCTTATTTCTCCTCTGCTTCTGCTCTCTCTTCCGGGGCTTGTGCCTATGGCCCTATGGCTACGAGCTTCTTTGCCGGCCACATTGCGGCCGCTATACCTTCCATTTACAAAGATGGTGCTGGCTGTGGAGCTTGCTTTCAAGTCAGATGCAAGAACCCCAAGTTGTGTAACAGTAAAGGAACCATTGTGATGGTCACAGACTTGAACACGAGCAACCAAACTGATCTTGTCCTTAGTAGTAGAGCTTTTAGGGCTATGGCTAAGCCTGTTGTTGGTGTTGACAAATACCTTCTCAAACAAGGCATCGTCGACGTTGAATACCAAAGAGTTCCTTGCAATTACGGTAAAAGGAATTTGAACGTGAGAGTGGAAGAAGCAAGCAAAAAGCCAAATTACTTGGCGATAAAGCTATTGTACCAAGGAGGTCAAACCGAAGTGGTAGGTATCGACATTGCTCCAGTAGGTTCGTCACAATGGAGTTACATGAGTAGAAGCCACGGAGCCGTTTGGGCGACCGATAAAGTACCAACGGGAGCTCTACAGTTCAAGTTCACGGTGACAGGCGGCTACGATGGCAAAACGGTTTGGTCAAAGAGGGTTCTTCCGGCGAATTGGAACTCTGGGAGGATTTATGATGCCGGCGTTCAGATCACCGACATTGCTCAAGAAGGTTGTGATACATGCGGTCACATATGGAACTGA
Protein Sequence
- >AT3G45960.2
MRSFLYLIVVIFLFSSSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIAQEGCDTCGHIWN - >AT3G45960.1
MRSFLYLIVVIFLFSSSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIAQEGCDTCGHIWN