Information report for TaEXPA1
Gene Details
|
|
Functional Descriptions
- Expansin genes play important roles in the regulation of cell size, as well as organ size. We found that all three TaEXPA1 homoeologs were silenced in seedling roots.
- Chromatin immunoprecipitation assays revealed that the transcriptional silencing of three TaEXPA1 homoeologs in roots was correlated with an increased level of H3K9 dimethylation and decreased levels of H3K4 trimethylation and H3K9 acetylation.
- Reactivation of TaEXPA1-A and TaEXPA1-D expression in leaves was correlated with increased levels of H3K4 trimethylation and H3K9 acetylation, and decreased levels of H3K9 dimethylation in their promoters, respectively.
- We demonstrated that epigenetic modifications contribute to the expression divergence of three TaEXPA1 homoeologs during wheat development.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: AY485121
- UniProt accessions: Q6RZ38
- EMBL: AY485121
- AlphaFoldDB: Q6RZ38
- GO: GO:0005576 , GO:0009664 , GO:0016020
- InterPro: IPR002963 , IPR007112 , IPR007117 , IPR007118
- PANTHER: PTHR31867
- SUPFAM: SSF49590 , SSF50685
- PROSITE: PS50842 , PS50843
- Gene3D: 2.40.40.10 , 2.60.40.760
- CDD: cd22274
Homologs
Sequences
cDNA Sequence
- >AY485121
CCCTCGAAAGCTAAGCTAGCTTGCTGATACAAGGAAGCTCTCTCCCAGCGATGGCGGCTGCCGGTGCTCTCTTTTTCCTATTCTCCTCCTTCTGCCTCCTCGCCCGGCAGGCCGCGGCCGGCGGGTACGGCGGCTGGCAGAGCGCCCATGCCACCTTCTACGACGGCGGCGACGCCTCCGGCACCATGGGCGGGGCATGCGGGTATGGCAACCTGTACAGCACCGGGTACGGCACGAACACGGCGGCGCTGAGCACAGCGCTGTTCAACGACGGCGCGGCGTGCGGGTCGTGCTACGAGCTGCGCTGCGACAACGCCGGCAGCTCGTGCCGGCCGGGGTCCATCCTGGTGACGGCCACCAACTTCTGCCCGCCCAACTACGGCCTCCCCAGCGACGACGGCGGCTGGTGCAACCCGCCCCGACCCCACTTCGACATGGCCGAGCCGGCCTTCCTCCACATCGCGCAGCACCGCGCCGGCATCGTGCCCGTCCCCTACAGAAGGGTGCCGTGCGTGAAGAAGGGGGGCATCCGGTTCACCATCAACGGCCACTCCTACTTCAACCTGGTGCTGGTGACCAACGTGGCCGGCGCCGGCGACGCGCGGTCCGTGTCCATCAAGGGCACGCGCACCGGCTGGCAGGCCATGTCCCGCAACTGGGGCATGAACTGGCAGAGCAACACCTTCCTGGACGGCCAGTGCCTCTCCTTCCGGGTCACCTCCAGCGACGGCCGCACCGTCACCAGCAACGCCGCCGCGCCCGCCGGCTGGCACTTCGGCCAGACCTTCGAGGGCGCCCAGTTCTAGTCTGCTCCCTCCTCTTCTCCTTCTCCACAGGCATAAGCATTGAAGAGAAGAGACGGACGGAGCGTATTCTATTGAAGAATTATTTTGCATTCGCGTGCGTGCAGGAGGAGGAAGAAAGGCCGGCCTCTTCGTTATAGTGAAGGAGGAGGCTCCGGGCTACGCTGAGGCTGCTAATTAGCACCCGCTTAGACGTCTTCCTTCTCTCATCAAAGTCTCAAGTTTATTGAGGACTTGAACAACCATCCATCCATCAAGTACCGTACGGACGTAGTAGCGTGGCGCTCATTGAAGAAGAAGAAGAAGAAAAGAAGTTAATAATTGCATTACTAGTTATGATCAGTAGCAGTACCTTTGGTGGTTTGTACCAGTACTAATTTGTACTACGGGGTGGTGGCCCTTGTGATGAAATAGAAGATTTGCAAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
CDS Sequence
- >AY485121
ATGGCGGCTGCCGGTGCTCTCTTTTTCCTATTCTCCTCCTTCTGCCTCCTCGCCCGGCAGGCCGCGGCCGGCGGGTACGGCGGCTGGCAGAGCGCCCATGCCACCTTCTACGACGGCGGCGACGCCTCCGGCACCATGGGCGGGGCATGCGGGTATGGCAACCTGTACAGCACCGGGTACGGCACGAACACGGCGGCGCTGAGCACAGCGCTGTTCAACGACGGCGCGGCGTGCGGGTCGTGCTACGAGCTGCGCTGCGACAACGCCGGCAGCTCGTGCCGGCCGGGGTCCATCCTGGTGACGGCCACCAACTTCTGCCCGCCCAACTACGGCCTCCCCAGCGACGACGGCGGCTGGTGCAACCCGCCCCGACCCCACTTCGACATGGCCGAGCCGGCCTTCCTCCACATCGCGCAGCACCGCGCCGGCATCGTGCCCGTCCCCTACAGAAGGGTGCCGTGCGTGAAGAAGGGGGGCATCCGGTTCACCATCAACGGCCACTCCTACTTCAACCTGGTGCTGGTGACCAACGTGGCCGGCGCCGGCGACGCGCGGTCCGTGTCCATCAAGGGCACGCGCACCGGCTGGCAGGCCATGTCCCGCAACTGGGGCATGAACTGGCAGAGCAACACCTTCCTGGACGGCCAGTGCCTCTCCTTCCGGGTCACCTCCAGCGACGGCCGCACCGTCACCAGCAACGCCGCCGCGCCCGCCGGCTGGCACTTCGGCCAGACCTTCGAGGGCGCCCAGTTCTAG
Protein Sequence
- >AY485121
MAAAGALFFLFSSFCLLARQAAAGGYGGWQSAHATFYDGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCRPGSILVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQHRAGIVPVPYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWHFGQTFEGAQF