Information report for OsEXPB2
Gene Details
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Functional Descriptions
- A clear difference was observed between RNA interference (RNAi) lines and wild-type in root system architecture and plant height, and the suppression of OsEXPB2 resulted in a visible alteration of the width of the leaf blade.
- The OsEXPB2 promoter contains conserved root hair-specific elements.
- Analysis of spatial and temporal expression patterns demonstrated that OsEXPB2 was predominantly expressed in root of rice.
- All these results suggest that OsEXPB2 is a root-predominant gene with a key role in root-hair formation and has the potential to be utilized in transgenic root breeding to improve abiotic stress tolerance.
- OsEXPB2 expression levels were up-regulated by abiotic stresses, such as phosphate or iron deficiency, and also suppressed by abscisic acid.
- Subcellular localization assay revealed that OsEXPB2 was localized in the cell wall.
Functional Keywords
- leaf , root , tolerance , abiotic-stress , stress , architecture , cell-wall , breeding , plant-height , iron , biotic-stress , abscisic-acid , stress-tolerance , phosphate , root-hair , root-system-architecture
Literature and News
Gene Resources
- UniProt: O24230
- EMBL: AC037426, AK061068, AK104128
- AlphaFoldDB: O24230
- EnsemblPlants: Os10t0555700-02
- Gramene: Os10t0555700-02
- KEGG: dosa:Os10g0555700
- Orthologous matrix: VELRGMT
- InterPro: IPR005795, IPR007112, IPR007117
- PANTHER: PTHR31692, PTHR31692:SF19
- SUPFAM: SSF49590, SSF50685
- PROSITE: PS50842, PS50843
- Gene3D: 2.40.40.10, 2.60.40.760
- OrthoDB: O24230
- SWISS-MODEL: O24230
- Conserved Domain Database: cd22275
- eggNOG: ENOG502QRTE
Homologs
Sequences
cDNA Sequence
- >LOC_Os10g40710.1
AAAACACAAAGCAGACAAGGTAGTAGTACAGGCTTTTGTACGTACGTAGCAGAGGGAGTTCCCAAGATGGCTGGGGCCTCTGCCAAGGTCGTCGCGATGCTGCTCTCCGTGCTCGCCACGTACGGCTTCGCCGCCGGCGTCGTCTACACCAACGACTGGCTCCCGGCCAAGGCCACCTGGTACGGCCAGCCCAACGGCGCCGGACCCGACGACAACGGCGGTGCGTGCGGGTTCAAGAACACCAACCAGTACCCGTTCATGTCCATGACCTCCTGCGGCAACGAGCCTCTGTTCCAGGACGGCAAGGGCTGTGGCGCCTGCTACCAGATACGGTGCACCAACAACCCGTCGTGCTCCGGGCAGCCCAGGACGGTGATCATCACGGACATGAACTACTACCCCGTGGCCAGGTACCACTTCGACCTGAGCGGCACGGCGTTCGGCGCCATGGCGAGGCCGGGGCTGAACGACCAGCTCCGCCACGCCGGCATCATCGACATCCAGTTCAGGCGCGTCCCGTGCTACCACCGCGGCCTCTACGTGAACTTCCACGTCGAGGCCGGGTCCAACCCGGTGTACCTCGCCGTGCTGGTGGAGTTCGCCAACAAGGACGGCACGGTGGTGCAGCTCGACGTCATGGAGTCGCTCCCCAGCGGCAAGCCGACGCGGGTCTGGACGCCCATGCGCCGCTCCTGGGGATCCATCTGGCGCCTCGACGCCAACCACCGCCTCCAGGGCCCCTTCTCCCTCCGCATGGTCAGCGAGTCCGGCCAGACCGTCATCGCCCACCAGGTCATCCCGGCCAACTGGAGGGCCAACACCAACTACGGCTCCAAAGTCCAGTTCCGTTGATCCATCGATCGATCTACCTATGTGCATGCAATGCCTTCGTCGTCTTGTGTCGCCGGTCAAGAACGAATTTTGATTCTACCGATCGGCAGTTCGGCACTAGTACTGTACTACGATTCTGTGTGTGTGTGTGTGTGTGTGTGATTGCAATGCAAATTGCGAACGGATCAATTAAGAGCGTTTTTTTCTCTCTCTCTTTTTAATTTGTAGTTGTGTGTGTCAGCGAGATGTGTGGGAAATGGAACAGGGGCAGGGCACGCAGTATCCATGTGCTTGCTCTGAACCGCCCACATTGACAAATGACCCAATGCCAATATGCCATATATATATACCGGATTGGCAGACTTATTGTATTGTGACCAAAACCAAGTTTGTAATTGAACTGAATTAATACGGTGTGTTTGCTTATCAGA
CDS Sequence
- >LOC_Os10g40710.1
ATGGCTGGGGCCTCTGCCAAGGTCGTCGCGATGCTGCTCTCCGTGCTCGCCACGTACGGCTTCGCCGCCGGCGTCGTCTACACCAACGACTGGCTCCCGGCCAAGGCCACCTGGTACGGCCAGCCCAACGGCGCCGGACCCGACGACAACGGCGGTGCGTGCGGGTTCAAGAACACCAACCAGTACCCGTTCATGTCCATGACCTCCTGCGGCAACGAGCCTCTGTTCCAGGACGGCAAGGGCTGTGGCGCCTGCTACCAGATACGGTGCACCAACAACCCGTCGTGCTCCGGGCAGCCCAGGACGGTGATCATCACGGACATGAACTACTACCCCGTGGCCAGGTACCACTTCGACCTGAGCGGCACGGCGTTCGGCGCCATGGCGAGGCCGGGGCTGAACGACCAGCTCCGCCACGCCGGCATCATCGACATCCAGTTCAGGCGCGTCCCGTGCTACCACCGCGGCCTCTACGTGAACTTCCACGTCGAGGCCGGGTCCAACCCGGTGTACCTCGCCGTGCTGGTGGAGTTCGCCAACAAGGACGGCACGGTGGTGCAGCTCGACGTCATGGAGTCGCTCCCCAGCGGCAAGCCGACGCGGGTCTGGACGCCCATGCGCCGCTCCTGGGGATCCATCTGGCGCCTCGACGCCAACCACCGCCTCCAGGGCCCCTTCTCCCTCCGCATGGTCAGCGAGTCCGGCCAGACCGTCATCGCCCACCAGGTCATCCCGGCCAACTGGAGGGCCAACACCAACTACGGCTCCAAAGTCCAGTTCCGTTGA
Protein Sequence
- >LOC_Os10g40710.1
MAGASAKVVAMLLSVLATYGFAAGVVYTNDWLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQGPFSLRMVSESGQTVIAHQVIPANWRANTNYGSKVQFR*