Information report for AT3G29030
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- SALK_043239C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:ND.
Functional Keywords
Literature and News
- Molecular cloning and sequence analysis of expansins–a highly conserved, multigene family of proteins that mediate cell wall extension in plants. DOI: 10.1073/pnas.92.20.9245 ; PMID: 7568110
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- Gene expression phenotypes of Arabidopsis associated with sensitivity to low temperatures. DOI: 10.1104/pp.103.021261 ; PMID: 12805619
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue. DOI: 10.1104/pp.105.070763 ; PMID: 16299171
- Systemic signalling of environmental cues in Arabidopsis leaves. DOI: 10.1093/jxb/erj033 ; PMID: 16330523
- Characterization of a novel putative zinc finger gene MIF1: involvement in multiple hormonal regulation of Arabidopsis development. DOI: 10.1111/j.1365-313X.2005.02626.x ; PMID: 16412086
- Expansins are involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02856.x ; PMID: 16942607
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Arabidopsis thaliana plants acclimated to low dose rates of ultraviolet B radiation show specific changes in morphology and gene expression in the absence of stress symptoms. DOI: 10.1111/j.1469-8137.2007.02092.x ; PMID: 17587374
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The extracellular EXO protein mediates cell expansion in Arabidopsis leaves. DOI: 10.1186/1471-2229-9-20 ; PMID: 19216774
- Brassinosteroids control AtEXPA5 gene expression in Arabidopsis thaliana. DOI: 10.1016/j.phytochem.2009.11.003 ; PMID: 20035956
- HDG11 upregulates cell-wall-loosening protein genes to promote root elongation in Arabidopsis. DOI: 10.1093/jxb/eru202 ; PMID: 24821957
- Antagonistic relationship between AtRALF1 and brassinosteroid regulates cell expansion-related genes. DOI: 10.4161/15592324.2014.976146 ; PMID: 25482784
- Overexpression of the carbohydrate binding module of strawberry expansin2 in Arabidopsis thaliana modifies plant growth and cell wall metabolism. DOI: 10.1007/s11103-015-0311-4 ; PMID: 25837738
- A maize ADP-ribosylation factor ZmArf2 increases organ and seed size by promoting cell expansion in Arabidopsis. DOI: 10.1111/ppl.12359 ; PMID: 26096810
- Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes. DOI: 10.1016/j.gdata.2017.05.002 ; PMID: 28529882
- Molecular cloning and sequence analysis of expansins–a highly conserved, multigene family of proteins that mediate cell wall extension in plants. DOI: 10.1073/pnas.92.20.9245 ; PMID: 7568110
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
Gene Resources
- UniProt: Q1ECM3
- EMBL: BT025711
- AlphaFoldDB: Q1ECM3
- EnsemblPlants: AT3G29030.1
- Gramene: AT3G29030.1
- KEGG: ath:AT3G29030
- Orthologous matrix: QLMCVNA
- ExpressionAtlas: AT3G29030
Homologs
Sequences
cDNA Sequence
- >AT3G29030.1
TATCTGATACGCATTTATTTCAATTTCTTGAGTGACCTTTACGATAGATTCCAACTCATTTTGACAATTTTTCTTTGGTCCAACTCTTACATATTAACATTCACCTTCCTTTTTGATTTTCGTCGGTTCTACATGTTAAACCCTTCAAAAATTAAATTATAATAAGTATAGTGAAGACCAATAAGCAGTTGCATGGACCCTGATTGATTCATTACCGCTAAAACTTTGTCTGAATCCTTCTTCCTATTTATACCACTCTCTTCTTCTTCTCCAGTTTCATCACACCAAACTTCTCACATCTCCTCATTCTGTATTTTGACAAAAAAAAAACACCCTTTGTTTTTTCTCTCCTTTGCATGTTGTGATTGTTTTTGCTTCACAACATGGGAGTTTTAGTAATCTCGCTTCTCGTGGTTCATCTCCTAGCTTTTTCCGTCTGCGTTCAGGGCGGCTACCGTCGTGGCGGACACCATCCCGGCGGTCACATGGGACCTTGGATCAACGCTCATGCCACTTTTTACGGCGGCGGTGATGCTTCCGGCACTATGGGTGGAGCATGCGGGTACGGCAATCTGTATAGCCAAGGTTATGGACTGGAGACGGCAGCGCTGAGCACAGCGTTATTCGACCAAGGACTTAGTTGTGGCGCATGTTTTGAGCTGATGTGTGTCAACGATCCTCAATGGTGCATAAAAGGCCGATCCATTGTGGTCACTGCCACTAACTTTTGTCCTCCTGGTGGTGCATGCGACCCTCCCAACCACCATTTCGATCTTTCTCAGCCGATCTACGAGAAAATTGCTCTCTACAAATCCGGTATCATTCCCGTTATGTATAGAAGGGTTCGGTGCAAGAGAAGTGGTGGGATAAGGTTCACGATCAACGGCCACTCATACTTTAACTTGGTGTTGGTCACAAACGTGGGTGGAGCCGGGGACGTACACTCGGTCTCAATGAAAGGGTCGAGGACAAAATGGCAATTAATGTCGAGAAATTGGGGGCAAAATTGGCAAAGCAACTCTTATCTCAATGGTCAAAGTCTGTCGTTTGTTGTTACCACAAGTGATCGTCGAAGTGTCGTCTCTTTTAATGTTGCACCACCCACTTGGTCCTTTGGCCAGACCTACACCGGAGGGCAGTTTCGGTATTAATTATATATAATCGGTTCGGTTTGTTATTGTGCTTTTTTTTTTTTTTTCGGTTCCAAGTTGGGGACTCTTTTTTGGTAACCAATTGAGATTGGGACTGATAGTGATATGTAGCGAATATATGTGTGGGAACGAGAAAAAGAGAAGTTTTATTAATTCTCGTTTTATAATATAAGAAAATGAAAGTGATGTTATGTATTTTGCTTTTTAATTAATTTGAGTACTAAGTGGTGAAAATTCTCATGTTATGGAAGCATGAAATTTGTTTTTTCTGCCAAA
CDS Sequence
- >AT3G29030.1
ATGGGAGTTTTAGTAATCTCGCTTCTCGTGGTTCATCTCCTAGCTTTTTCCGTCTGCGTTCAGGGCGGCTACCGTCGTGGCGGACACCATCCCGGCGGTCACATGGGACCTTGGATCAACGCTCATGCCACTTTTTACGGCGGCGGTGATGCTTCCGGCACTATGGGTGGAGCATGCGGGTACGGCAATCTGTATAGCCAAGGTTATGGACTGGAGACGGCAGCGCTGAGCACAGCGTTATTCGACCAAGGACTTAGTTGTGGCGCATGTTTTGAGCTGATGTGTGTCAACGATCCTCAATGGTGCATAAAAGGCCGATCCATTGTGGTCACTGCCACTAACTTTTGTCCTCCTGGTGGTGCATGCGACCCTCCCAACCACCATTTCGATCTTTCTCAGCCGATCTACGAGAAAATTGCTCTCTACAAATCCGGTATCATTCCCGTTATGTATAGAAGGGTTCGGTGCAAGAGAAGTGGTGGGATAAGGTTCACGATCAACGGCCACTCATACTTTAACTTGGTGTTGGTCACAAACGTGGGTGGAGCCGGGGACGTACACTCGGTCTCAATGAAAGGGTCGAGGACAAAATGGCAATTAATGTCGAGAAATTGGGGGCAAAATTGGCAAAGCAACTCTTATCTCAATGGTCAAAGTCTGTCGTTTGTTGTTACCACAAGTGATCGTCGAAGTGTCGTCTCTTTTAATGTTGCACCACCCACTTGGTCCTTTGGCCAGACCTACACCGGAGGGCAGTTTCGGTATTAA
Protein Sequence
- >AT3G29030.1
MGVLVISLLVVHLLAFSVCVQGGYRRGGHHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFRY