Information report for AT2G40610
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
Functional Keywords
Literature and News
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- A crucial role for the putative Arabidopsis topoisomerase VI in plant growth and development. DOI: 10.1073/pnas.152337599 ; PMID: 12119417
- Global and hormone-induced gene expression changes during shoot development in Arabidopsis. DOI: 10.1105/tpc.006668 ; PMID: 12417700
- BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. DOI: 10.1016/s0092-8674(02)00721-3 ; PMID: 12007405
- Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(03)01194-3 ; PMID: 14623097
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Expression profiling of the response of Arabidopsis thaliana to methanol stimulation. DOI: 10.1016/j.phytochem.2004.07.006 ; PMID: 15381001
- Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02288.x ; PMID: 15634197
- Isolation and characterization of flower-specific transcripts in Acacia mangium. DOI: 10.1093/treephys/25.2.167 ; PMID: 15574398
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Leucine-rich repeat receptor-like kinase1 is a key membrane-bound regulator of abscisic acid early signaling in Arabidopsis. DOI: 10.1105/tpc.104.027474 ; PMID: 15772289
- Genome-wide identification of genes expressed in Arabidopsis pistils specifically along the path of pollen tube growth. DOI: 10.1104/pp.105.060558 ; PMID: 15894741
- Stress responses to polycyclic aromatic hydrocarbons in Arabidopsis include growth inhibition and hypersensitive response-like symptoms. DOI: 10.1093/jxb/eri295 ; PMID: 16207747
- Dynamic histone acetylation of late embryonic genes during seed germination. DOI: 10.1007/s11103-005-2081-x ; PMID: 16307366
- Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue. DOI: 10.1104/pp.105.070763 ; PMID: 16299171
- A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth. DOI: 10.1104/pp.105.069690 ; PMID: 16377748
- A gradient of auxin and auxin-dependent transcription precedes tropic growth responses. DOI: 10.1073/pnas.0507127103 ; PMID: 16371470
- Characterization of a novel putative zinc finger gene MIF1: involvement in multiple hormonal regulation of Arabidopsis development. DOI: 10.1111/j.1365-313X.2005.02626.x ; PMID: 16412086
- Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. DOI: 10.1104/pp.106.081240 ; PMID: 16648215
- Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis. DOI: 10.1111/j.1365-313X.2006.02782.x ; PMID: 16792696
- Expansins are involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02856.x ; PMID: 16942607
- The Populus homeobox gene ARBORKNOX1 reveals overlapping mechanisms regulating the shoot apical meristem and the vascular cambium. DOI: 10.1007/s11103-006-0059-y ; PMID: 16927204
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. DOI: 10.1016/j.cell.2006.05.050 ; PMID: 16901781
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- ATR and ATM play both distinct and additive roles in response to ionizing radiation. DOI: 10.1111/j.1365-313X.2006.02931.x ; PMID: 17227549
- Impact of AtNHX1, a vacuolar Na+/H+ antiporter, upon gene expression during and long-term salt stress in Arabidopsis thaliana. DOI: 10.1186/1471-2229-7-18 ; PMID: 17411438
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance. DOI: 10.1104/pp.107.098293 ; PMID: 17478635
- Control of plant organ size by KLUH/CYP78A5-dependent intercellular signaling. DOI: 10.1016/j.devcel.2007.10.001 ; PMID: 18061566
- Redox state of plastoquinone pool regulates expression of Arabidopsis thaliana genes in response to elevated irradiance. DOI: 20081565 ; PMID: 18231654
- Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. DOI: 10.1104/pp.107.110908 ; PMID: 18192438
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-91 ; PMID: 18783601
- Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes. DOI: 10.1186/1471-2229-9-6 ; PMID: 19149885
- Expanding nematode-induced syncytia: the role of expansins. DOI: 10.4161/psb.1.5.3426 ; PMID: 19704662
- Gibberellin indirectly promotes chloroplast biogenesis as a means to maintain the chloroplast population of expanded cells. DOI: 10.1111/j.1365-313X.2012.05118.x ; PMID: 23020316
- Overexpression of the carbohydrate binding module of strawberry expansin2 in Arabidopsis thaliana modifies plant growth and cell wall metabolism. DOI: 10.1007/s11103-015-0311-4 ; PMID: 25837738
- Efficient use of artificial micro-RNA to downregulate the expression of genes at the post-transcriptional level in Arabidopsis thaliana. DOI: 10.4238/gmr.15027439 ; PMID: 27173203
- The targeting of starch binding domains from starch synthase III to the cell wall alters cell wall composition and properties. DOI: 10.1007/s11103-016-0551-y ; PMID: 27770231
- The Energy-Signaling Hub SnRK1 Is Important for Sucrose-Induced Hypocotyl Elongation. DOI: 10.1104/pp.17.01395 ; PMID: 29114081
- The Circadian Clock Influences the Long-Term Water Use Efficiency of Arabidopsis. DOI: 10.1104/pp.20.00030 ; PMID: 32179629
- Arabidopsis NF-YCs play dual roles in repressing brassinosteroid biosynthesis and signaling during light-regulated hypocotyl elongation. DOI: 10.1093/plcell/koab112 ; PMID: 33871651
- Overexpression of HLH4 Inhibits Cell Elongation and Anthocyanin Biosynthesis in Arabidopsis thaliana. DOI: 10.3390/cells11071087 ; PMID: 35406652
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: Q0WQK9
- EMBL: AK228685
- AlphaFoldDB: Q0WQK9
- EnsemblPlants: AT2G40610.1
- Gramene: AT2G40610.1
- KEGG: ath:AT2G40610
- Orthologous matrix: DNAGASC
- ExpressionAtlas: AT2G40610
Homologs
Sequences
cDNA Sequence
- >AT2G40610.1
AAATAAATCAACTAAATACCCAAAAAGGTGAAAGAATTAGAGACACCCCAATGTACTTCATATAGTAAACATTTAAATATGATTATCGCTTGGCACAATTATTCACTCGAGTACCCCTATATATACCCATTCCTTCCATTTGTAGATTCCATATTATTCACGATTCTCATCAAATCATCTCCGATACTCACAACCGAAATAACTAACCCCTCCTCAACAAAAAACAACAAAACATGTACACTCCATCATACTTAAAATATTCAATAATCTCAATTATATCCGTATTATTCCTCCAAGGAACTCATGGAGACGACGGAGGTTGGCAAGGTGGTCACGCCACGTTTTACGGCGGCGAAGATGCTTCCGGCACCATGGGCGGAGCTTGTGGCTATGGAAATTTGTATGGCCAAGGTTACGGGACGAACACGGCGGCTTTAAGTACGGCTCTATTCAACAACGGACTCACGTGTGGCGCGTGCTATGAGATGAAGTGTAACGATGACCCGAGGTGGTGTCTCGGGTCAACCATCACCGTCACAGCTACAAACTTTTGCCCACCTAACCCTGGCCTCTCCAACGATAATGGAGGTTGGTGCAATCCTCCTCTTCAGCATTTCGACCTCGCCGAGCCAGCTTTTCTTCAGATCGCTCAGTATCGTGCCGGCATTGTTCCTGTCTCTTTCCGAAGAGTACCATGTATGAAGAAAGGAGGAATAAGGTTTACGATCAACGGACACTCATACTTCAACCTCGTTCTGATCTCCAACGTAGGAGGAGCAGGAGACGTACACGCCGTCTCAATCAAAGGCTCAAAAACACAGTCGTGGCAAGCGATGTCTAGAAACTGGGGACAAAACTGGCAGAGCAATTCATACATGAACGACCAAAGCCTTTCCTTCCAGGTAACGACCAGCGATGGTCGCACACTCGTTAGCAACGACGTGGCTCCTTCTAATTGGCAGTTCGGACAAACCTACCAAGGTGGTCAGTTCTGATCCAAACCATCATCCACATCTCTCTGTTTTGGGTGCTGACGTGGCTGCATATTGCTGAGGTGGCTCGTAAGCACCCGCTTAATTAGCTTAGCCTTTTTTTTCTCTTATTTACGAATTATTGCTTCAATGGTTGTATTTTCATTGTGCCTACAAAAAAGCAAGGTTTTTTTACATGTTTATTGGATTTTTTTCTTCTCTTTATAAGCCAATATCGACGCCCAAAAGAATGAAATTACACATGAATTGATTTAATAATTTCGAATTTTATTTAATCAACTACAAAGGTTTTTTTTTTTTTCCTTACACAAAGTGTTTATATACACGATTATA
CDS Sequence
- >AT2G40610.1
ATGTACACTCCATCATACTTAAAATATTCAATAATCTCAATTATATCCGTATTATTCCTCCAAGGAACTCATGGAGACGACGGAGGTTGGCAAGGTGGTCACGCCACGTTTTACGGCGGCGAAGATGCTTCCGGCACCATGGGCGGAGCTTGTGGCTATGGAAATTTGTATGGCCAAGGTTACGGGACGAACACGGCGGCTTTAAGTACGGCTCTATTCAACAACGGACTCACGTGTGGCGCGTGCTATGAGATGAAGTGTAACGATGACCCGAGGTGGTGTCTCGGGTCAACCATCACCGTCACAGCTACAAACTTTTGCCCACCTAACCCTGGCCTCTCCAACGATAATGGAGGTTGGTGCAATCCTCCTCTTCAGCATTTCGACCTCGCCGAGCCAGCTTTTCTTCAGATCGCTCAGTATCGTGCCGGCATTGTTCCTGTCTCTTTCCGAAGAGTACCATGTATGAAGAAAGGAGGAATAAGGTTTACGATCAACGGACACTCATACTTCAACCTCGTTCTGATCTCCAACGTAGGAGGAGCAGGAGACGTACACGCCGTCTCAATCAAAGGCTCAAAAACACAGTCGTGGCAAGCGATGTCTAGAAACTGGGGACAAAACTGGCAGAGCAATTCATACATGAACGACCAAAGCCTTTCCTTCCAGGTAACGACCAGCGATGGTCGCACACTCGTTAGCAACGACGTGGCTCCTTCTAATTGGCAGTTCGGACAAACCTACCAAGGTGGTCAGTTCTGA
Protein Sequence
- >AT2G40610.1
MYTPSYLKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF