Information report for AT2G28950
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Molecular cloning and sequence analysis of expansins–a highly conserved, multigene family of proteins that mediate cell wall extension in plants. DOI: 10.1073/pnas.92.20.9245 ; PMID: 7568110
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Apoplastic glycosidases active against xyloglucan oligosaccharides of Arabidopsis thaliana. DOI: 10.1093/pcp/pci223 ; PMID: 16267099
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Expansins are involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02856.x ; PMID: 16942607
- Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress. DOI: 10.1007/s11103-006-9080-4 ; PMID: 16972165
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- A quantitative trait loci analysis of zinc hyperaccumulation in Arabidopsis halleri. DOI: 10.1111/j.1469-8137.2007.02036.x ; PMID: 17447913
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Phosphatidylinositol 4-kinase activation is an early response to salicylic acid in Arabidopsis suspension cells. DOI: 10.1104/pp.107.100842 ; PMID: 17496105
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Expanding nematode-induced syncytia: the role of expansins. DOI: 10.4161/psb.1.5.3426 ; PMID: 19704662
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
Gene Resources
- UniProt: A0A178VZL6
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VZL6
- EnsemblPlants: AT2G28950.1
- Gramene: AT2G28950.1
- KEGG: ath:AT2G28950
- Orthologous matrix: GTHTSWM
- ExpressionAtlas: AT2G28950
- InterPro: IPR002963, IPR007112, IPR007117
- PANTHER: PTHR31867
- SUPFAM: SSF49590, SSF50685
- PROSITE: PS50842, PS50843
- Gene3D: 2.40.40.10, 2.60.40.760
- OrthoDB: A0A178VZL6
- SWISS-MODEL: A0A178VZL6
- Conserved Domain Database: cd22274
Homologs
Sequences
cDNA Sequence
- >AT2G28950.1
TGGATTTGTACGCATGACTTTTTTTACACATACAAATAATTGTAAAACTTTTGTCAAAAACCCAAATCGTGTTTAGTAATCTCTATTCATAAGCTAGAGAACTATGACCCCTAGAGGTTAAACTTTTGTAATGATAAAGAAAGAGAATAATACAAAGCAAGAGAAATAAATAAATGCTTAAGTCCCAATTTATATATAGTCACCTCTCTATACCCTTCCCTACACACATGGAGACACTCCAATAAACTCTTCTTCTGCCTCCTCTGCCCATTTCTCCCAATCTCTCTCTATTTTCTCAGTCTCTCTCTCAGATAATGGCAATGTTGGGCTTGGTTTTATCTGTTCTTACTACAATTCTTGCATTGTCTGAAGCAAGAATCCCAGGAGTTTACAATGGTGGTGGTTGGGAAACTGCTCACGCCACTTTCTACGGTGGCTCTGATGCTTCTGGAACAATGGGAGGAGCTTGTGGTTATGGTAACTTATACAGCCAAGGCTATGGTGTGAACACGGCGGCTTTAAGCACGGCTCTGTTCAACAATGGTTTTAGCTGTGGTGCTTGTTTTGAGCTCAAATGTGCTAGTGATCCAAAATGGTGCCATTCTGGTAGTCCTTCAATCTTCATCACTGCGACTAATTTCTGTCCTCCGAACTTTGCTCAGCCTAGTGACAATGGTGGTTGGTGTAACCCTCCTAGACCTCACTTTGATCTTGCTATGCCTATGTTTCTCAAGATCGCTGAGTATCGTGCCGGAATCGTCCCCGTCTCTTTCCGCCGAGTGCCATGCCGGAAGAGAGGAGGAATAAGGTTCACAATCAACGGTTTCCGTTATTTTAACTTGGTTCTAGTCACTAACGTCGCTGGCGCCGGAAACATAGTGCGGCTAGGTGTGAAAGGAACACATACTTCGTGGATGACCATGAGTCGTAACTGGGGACAAAACTGGCAATCTAACTCAGTTTTGGTTGGTCAGTCACTTTCTTTTAGAGTCACAAGCAGTGACCGTAGAAGCTCGACGTCGTGGAACATTGCTCCGGCGAATTGGAAGTTTGGTCAGACTTTCATGGGAAAGAACTTCAGAGTCTGAGGGCATTATCGGAAACTCATCTATCAATATTAGTATTTTCATTATTACTATTAAAATTTCCAGCCGAAGGCATTAGTAATTTGAGAAATTTTAATATATATATTTATGTTTTTTAAGAGACCACTAAAATTCCAAATTTTCTTACCTCTCATGGGTTTGTGTTTTTTTACTGATGTGTTCGTTGGAGAGTGTGAAACGTGGGACAGTGGTGTCTTTTTTTAGTTCTTCAATGTTAAATGTGTAATCTTTAGGGGTGAAATTAGAAGTTTGTTTAAAGTAGAAGGAGCTGTGAAGCAGATGTGAAGAGTACTTCTGGTTTCAGCGTATTATAGTAAAAGAAGCAGTAATAGTTGTGTTTGTAATGCTTCTTGTAGAACTCCATATTGTAATTTATATATAAATGTGTGTATGTTTATGGTTTATTATCTTCTTTTTTTCTGAAAAGTAAACATCATTTTGTTACAAACCAAATTTTGATATTAAATGGAAAAAACTTCTGAAA
CDS Sequence
- >AT2G28950.1
ATGGCAATGTTGGGCTTGGTTTTATCTGTTCTTACTACAATTCTTGCATTGTCTGAAGCAAGAATCCCAGGAGTTTACAATGGTGGTGGTTGGGAAACTGCTCACGCCACTTTCTACGGTGGCTCTGATGCTTCTGGAACAATGGGAGGAGCTTGTGGTTATGGTAACTTATACAGCCAAGGCTATGGTGTGAACACGGCGGCTTTAAGCACGGCTCTGTTCAACAATGGTTTTAGCTGTGGTGCTTGTTTTGAGCTCAAATGTGCTAGTGATCCAAAATGGTGCCATTCTGGTAGTCCTTCAATCTTCATCACTGCGACTAATTTCTGTCCTCCGAACTTTGCTCAGCCTAGTGACAATGGTGGTTGGTGTAACCCTCCTAGACCTCACTTTGATCTTGCTATGCCTATGTTTCTCAAGATCGCTGAGTATCGTGCCGGAATCGTCCCCGTCTCTTTCCGCCGAGTGCCATGCCGGAAGAGAGGAGGAATAAGGTTCACAATCAACGGTTTCCGTTATTTTAACTTGGTTCTAGTCACTAACGTCGCTGGCGCCGGAAACATAGTGCGGCTAGGTGTGAAAGGAACACATACTTCGTGGATGACCATGAGTCGTAACTGGGGACAAAACTGGCAATCTAACTCAGTTTTGGTTGGTCAGTCACTTTCTTTTAGAGTCACAAGCAGTGACCGTAGAAGCTCGACGTCGTGGAACATTGCTCCGGCGAATTGGAAGTTTGGTCAGACTTTCATGGGAAAGAACTTCAGAGTCTGA
Protein Sequence
- >AT2G28950.1
MAMLGLVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV