Information report for ZmPLA1;MATRILINEAL
Gene Details
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Functional Descriptions
- The 4-bp (CGAG) insertion may cause a weak or loss-of-function allele of ZmPLA1, leading to the HI phenotype.
- ZmPLA1 (GRMZM2G471240) Mutation Causes Haploid Induction in Maize.
- A 4-bp Insertion at ZmPLA1 Encoding a Putative Phospholipase A Generates Haploid Induction in Maize.
- ZmPLA1/MTL-mediated HI may facilitate to enhance breeding efficiency not only in maize but also in other important crops.
- ZmPLA1 encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate.
Literature and News
Gene Resources
- NCBI ID: LOC103635924
- UniProt accessions: A0A1D6K4Z0 , A0A1P8YYK6 , A0A317YLS2
- EMBL: NCVQ01000001
- AlphaFoldDB: A0A317YLS2
- InterPro: IPR002641 , IPR016035
- PANTHER: PTHR32176 , PTHR32176:SF5
- SUPFAM: SSF52151
- PROSITE: PS51635
- Gene3D: 3.40.1090.10
- CDD: cd07214
Sequences
cDNA Sequence
- >Zm00001eb019170_T002
GTTCATCACTAATCACACTTATTGTGCCCTCGACGAGTATCTATAGCTAGCTCATTAATCGATTCGGGGGTGTGTTGTCGAAGGCGGCAATGGCGAGCTACTCGTCGCGGCGTCCATGCAATACCTGTAGCACGAAGGCGATGGCCGGGAGCGTGGTCGGCGAGCCCGTCGTGCTGGGGCAGAGGGTGACGGTGCTGACGGTGGACGGCGGCGGCGTCCGGGGTCTCATCCCGGGAACCATCCTCGCCTTCCTGGAGGCCAGGCTGCAGGAGCTGGACGGACCGGAGGCGAGGCTGGCGGACTACTTCGACTACATCGCCGGAACCAGCACCGGCGGTCTCATCACCGCCATGCTCACCGCGCCCGGCAAGGACAAGCGGCCTCTCTACGCTGCCAAGGACATCAACCACTTTTACATGCAGAACTGCCCGCGCATCTTTCCTCAGAAGAGCAGGCTTGCGGCCGCCATGTCCGCGCTGAGGAAGCCAAAGTACAACGGCAAGTGCATGCGCAGCCTGATTAGGAGCATCCTCGGCGAGACGAGGGTAAGCGAGACGCTGACCAACGTCATCATCCCTGCCTTCGACATCAGGCTGCTGCAGCCTATCATCTTCTCTACCTACGACGCCAAGAGCACGCCTCTGAAGAACGCTCTGCTCTCGGACGTGTGCATTGGCACGTCCGCCGCGCCGACCTACCTCCCGGCGCACTACTTCCAGACTGAAGACGCCAACGGCAAGGAGCGCGAATACAACCTCATCGACGGCGGTGTGGCGGCCAACAACCCGACGATGGTTGCGATGACGCAGATCACCAAAAAGATGCTTGCCAGCAAGGACAAGGCCGAGGAGCTGTACCCAGTGAAGCCGTCGAACTGCCGCAGGTTCCTGGTGCTGTCCATCGGGACGGGGTCGACGTCCGAGCAGGGCCTCTACACGGCGCGGCAGTGCTCCCGGTGGGGTATCTGCCGGTGGCTCCGCAACAACGGCATGGCCCCCATCATCGACATCTTCATGGCGGCCAGCTCGGACCTGGTGGACATCCACGTCGCCGCGATGTTCCAGTCGCTCCACAGCGACGGCGACTACCTGCGCATCCAGGACAACTCGCTCCGTGGCGCCGCGGCCACCGTGGACGCGGCGACGCCGGAGAACATGCGGACGCTCGTCGGGATCGGGGAGCGGATGCTGGCACAGAGGGTGTCCAGGGTCAACGTGGAGACAGGGAGGTACGAACCGGTGACTGGCGAAGGAAGCAATGCCGATGCCCTCGGTGGGCTCGCTAGGCAGCTCTCCGAGGAGAGGAGAACAAGGCTCGCGCGCCGCGTCTCTGCCATCAACCCAAGAGGCTCTAGATGTGCGTCGTACGATATCTAAGACAAGTGGCTTTACTGTCAGTCACATGCTTGTAAATAAGTAGACTTTATTTTAATAAAACATAAAAATATATATATGTTCTTGAATATAAAATTGATAACCAAATTAAAATTCGAACCATCACTTATACATAATTTTACTTTATTTTTTATAAAAC - >Zm00001eb019170_T001
GTTCATCACTAATCACACTTATTGTGCCCTCGACGAGTATCTATAGCTAGCTCATTAATCGATTCGGGGGTGTGTTGTCGAAGGCGGCAATGGCGAGCTACTCGTCGCGGCGTCCATGCAATACCTGTAGCACGAAGGCGATGGCCGGGAGCGTGGTCGGCGAGCCCGTCGTGCTGGGGCAGAGGGTGACGGTGCTGACGGTGGACGGCGGCGGCGTCCGGGGTCTCATCCCGGGAACCATCCTCGCCTTCCTGGAGGCCAGGCTGCAGGAGCTGGACGGACCGGAGGCGAGGCTGGCGGACTACTTCGACTACATCGCCGGAACCAGCACCGGCGGTCTCATCACCGCCATGCTCACCGCGCCCGGCAAGGACAAGCGGCCTCTCTACGCTGCCAAGGACATCAACCACTTTTACATGCAGAACTGCCCGCGCATCTTTCCTCAGAAGAGCAGGCTTGCGGCCGCCATGTCCGCGCTGAGGAAGCCAAAGTACAACGGCAAGTGCATGCGCAGCCTGATTAGGAGCATCCTCGGCGAGACGAGGGTAAGCGAGACGCTGACCAACGTCATCATCCCTGCCTTCGACATCAGGCTGCTGCAGCCTATCATCTTCTCTACCTACGACGCCAAGAGCACGCCTCTGAAGAACGCTCTGCTCTCGGACGTGTGCATTGGCACGTCCGCCGCGCCGACCTACCTCCCGGCGCACTACTTCCAGACTGAAGACGCCAACGGCAAGGAGCGCGAATACAACCTCATCGACGGCGGTGTGGCGGCCAACAACCCGACGATGGTTGCGATGACGCAGATCACCAAAAAGATGCTTGCCAGCAAGGACAAGGCCGAGGAGCTGTACCCAGTGAAGCCGTCGAACTGCCGCAGGTTCCTGGTGCTGTCCATCGGGACGGGGTCGACGTCCGAGCAGGGCCTCTACACGGCGCGGCAGTGCTCCCGGTGGGGTATCTGCCGGTGGCTCCGCAACAACGGCATGGCCCCCATCATCGACATCTTCATGGCGGCCAGCTCGGACCTGGTGGACATCCACGTCGCCGCGATGTTCCAGTCGCTCCACAGCGACGGCGACTACCTGCGCATCCAGGACAACTCGCTCCGTGGCGCCGCGGCCACCGTGGACGCGGCGACGCCGGAGAACATGCGGACGCTCGTCGGGATCGGGGAGCGGATGCTGGCACAGAGGGTGTCCAGGGTCAACGTGGAGACAGGGAGGTACGAACCGGTGACTGGCGAAGGAAGCAATGCCGATGCCCTCGGTGGGCTCGCTAGGCAGCTCTCCGAGGAGAGGAGAACAAGGCTCGCGCGCCGCGTCTCTGCCATCAACCCAAGAGGCTCTAGATGTGCGTCGTACGATATCTAAGACAAGTGGCTTTACTGTCAGTCACATGCTTGTAAATAAGTAGACTTTATTTTAATAAAACATAAAAATATATATATGTTCTTGAATATAAAATTGATAACCAAATTAAAATTCGAACCATCACTTATACATAATTTTACTTTATTTTTTATAAAAC
CDS Sequence
- >Zm00001eb019170_T002
ATGGCGAGCTACTCGTCGCGGCGTCCATGCAATACCTGTAGCACGAAGGCGATGGCCGGGAGCGTGGTCGGCGAGCCCGTCGTGCTGGGGCAGAGGGTGACGGTGCTGACGGTGGACGGCGGCGGCGTCCGGGGTCTCATCCCGGGAACCATCCTCGCCTTCCTGGAGGCCAGGCTGCAGGAGCTGGACGGACCGGAGGCGAGGCTGGCGGACTACTTCGACTACATCGCCGGAACCAGCACCGGCGGTCTCATCACCGCCATGCTCACCGCGCCCGGCAAGGACAAGCGGCCTCTCTACGCTGCCAAGGACATCAACCACTTTTACATGCAGAACTGCCCGCGCATCTTTCCTCAGAAGAGCAGGCTTGCGGCCGCCATGTCCGCGCTGAGGAAGCCAAAGTACAACGGCAAGTGCATGCGCAGCCTGATTAGGAGCATCCTCGGCGAGACGAGGGTAAGCGAGACGCTGACCAACGTCATCATCCCTGCCTTCGACATCAGGCTGCTGCAGCCTATCATCTTCTCTACCTACGACGCCAAGAGCACGCCTCTGAAGAACGCTCTGCTCTCGGACGTGTGCATTGGCACGTCCGCCGCGCCGACCTACCTCCCGGCGCACTACTTCCAGACTGAAGACGCCAACGGCAAGGAGCGCGAATACAACCTCATCGACGGCGGTGTGGCGGCCAACAACCCGACGATGGTTGCGATGACGCAGATCACCAAAAAGATGCTTGCCAGCAAGGACAAGGCCGAGGAGCTGTACCCAGTGAAGCCGTCGAACTGCCGCAGGTTCCTGGTGCTGTCCATCGGGACGGGGTCGACGTCCGAGCAGGGCCTCTACACGGCGCGGCAGTGCTCCCGGTGGGGTATCTGCCGGTGGCTCCGCAACAACGGCATGGCCCCCATCATCGACATCTTCATGGCGGCCAGCTCGGACCTGGTGGACATCCACGTCGCCGCGATGTTCCAGTCGCTCCACAGCGACGGCGACTACCTGCGCATCCAGGACAACTCGCTCCGTGGCGCCGCGGCCACCGTGGACGCGGCGACGCCGGAGAACATGCGGACGCTCGTCGGGATCGGGGAGCGGATGCTGGCACAGAGGGTGTCCAGGGTCAACGTGGAGACAGGGAGGTACGAACCGGTGACTGGCGAAGGAAGCAATGCCGATGCCCTCGGTGGGCTCGCTAGGCAGCTCTCCGAGGAGAGGAGAACAAGGCTCGCGCGCCGCGTCTCTGCCATCAACCCAAGAGGCTCTAGATGTGCGTCGTACGATATCTAA - >Zm00001eb019170_T001
ATGGCGAGCTACTCGTCGCGGCGTCCATGCAATACCTGTAGCACGAAGGCGATGGCCGGGAGCGTGGTCGGCGAGCCCGTCGTGCTGGGGCAGAGGGTGACGGTGCTGACGGTGGACGGCGGCGGCGTCCGGGGTCTCATCCCGGGAACCATCCTCGCCTTCCTGGAGGCCAGGCTGCAGGAGCTGGACGGACCGGAGGCGAGGCTGGCGGACTACTTCGACTACATCGCCGGAACCAGCACCGGCGGTCTCATCACCGCCATGCTCACCGCGCCCGGCAAGGACAAGCGGCCTCTCTACGCTGCCAAGGACATCAACCACTTTTACATGCAGAACTGCCCGCGCATCTTTCCTCAGAAGAGCAGGCTTGCGGCCGCCATGTCCGCGCTGAGGAAGCCAAAGTACAACGGCAAGTGCATGCGCAGCCTGATTAGGAGCATCCTCGGCGAGACGAGGGTAAGCGAGACGCTGACCAACGTCATCATCCCTGCCTTCGACATCAGGCTGCTGCAGCCTATCATCTTCTCTACCTACGACGCCAAGAGCACGCCTCTGAAGAACGCTCTGCTCTCGGACGTGTGCATTGGCACGTCCGCCGCGCCGACCTACCTCCCGGCGCACTACTTCCAGACTGAAGACGCCAACGGCAAGGAGCGCGAATACAACCTCATCGACGGCGGTGTGGCGGCCAACAACCCGACGATGGTTGCGATGACGCAGATCACCAAAAAGATGCTTGCCAGCAAGGACAAGGCCGAGGAGCTGTACCCAGTGAAGCCGTCGAACTGCCGCAGGTTCCTGGTGCTGTCCATCGGGACGGGGTCGACGTCCGAGCAGGGCCTCTACACGGCGCGGCAGTGCTCCCGGTGGGGTATCTGCCGGTGGCTCCGCAACAACGGCATGGCCCCCATCATCGACATCTTCATGGCGGCCAGCTCGGACCTGGTGGACATCCACGTCGCCGCGATGTTCCAGTCGCTCCACAGCGACGGCGACTACCTGCGCATCCAGGACAACTCGCTCCGTGGCGCCGCGGCCACCGTGGACGCGGCGACGCCGGAGAACATGCGGACGCTCGTCGGGATCGGGGAGCGGATGCTGGCACAGAGGGTGTCCAGGGTCAACGTGGAGACAGGGAGGTACGAACCGGTGACTGGCGAAGGAAGCAATGCCGATGCCCTCGGTGGGCTCGCTAGGCAGCTCTCCGAGGAGAGGAGAACAAGGCTCGCGCGCCGCGTCTCTGCCATCAACCCAAGAGGCTCTAGATGTGCGTCGTACGATATCTAA
Protein Sequence
- >Zm00001eb019170_P002
MASYSSRRPCNTCSTKAMAGSVVGEPVVLGQRVTVLTVDGGGVRGLIPGTILAFLEARLQELDGPEARLADYFDYIAGTSTGGLITAMLTAPGKDKRPLYAAKDINHFYMQNCPRIFPQKSRLAAAMSALRKPKYNGKCMRSLIRSILGETRVSETLTNVIIPAFDIRLLQPIIFSTYDAKSTPLKNALLSDVCIGTSAAPTYLPAHYFQTEDANGKEREYNLIDGGVAANNPTMVAMTQITKKMLASKDKAEELYPVKPSNCRRFLVLSIGTGSTSEQGLYTARQCSRWGICRWLRNNGMAPIIDIFMAASSDLVDIHVAAMFQSLHSDGDYLRIQDNSLRGAAATVDAATPENMRTLVGIGERMLAQRVSRVNVETGRYEPVTGEGSNADALGGLARQLSEERRTRLARRVSAINPRGSRCASYDI - >Zm00001eb019170_P001
MASYSSRRPCNTCSTKAMAGSVVGEPVVLGQRVTVLTVDGGGVRGLIPGTILAFLEARLQELDGPEARLADYFDYIAGTSTGGLITAMLTAPGKDKRPLYAAKDINHFYMQNCPRIFPQKSRLAAAMSALRKPKYNGKCMRSLIRSILGETRVSETLTNVIIPAFDIRLLQPIIFSTYDAKSTPLKNALLSDVCIGTSAAPTYLPAHYFQTEDANGKEREYNLIDGGVAANNPTMVAMTQITKKMLASKDKAEELYPVKPSNCRRFLVLSIGTGSTSEQGLYTARQCSRWGICRWLRNNGMAPIIDIFMAASSDLVDIHVAAMFQSLHSDGDYLRIQDNSLRGAAATVDAATPENMRTLVGIGERMLAQRVSRVNVETGRYEPVTGEGSNADALGGLARQLSEERRTRLARRVSAINPRGSRCASYDI