Information report for ZmGa2F
Gene Details
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Functional Descriptions
- Cloning of the tightly linked male determinant ZmGa2P and female determinant ZmGa2F that govern pollen-silk compatibility among different maize genotypes.
- Demonstrate the feasibility of Ga2 as a reproductive barrier in commercial breeding programs and stacking Ga2 with Ga1 could strengthen the UCI market potentials.
- Male determinant ZmGa2P and female determinant ZmGa2F that govern pollen-silk compatibility among different maize genotypes.
- ZmGa2P and ZmGa2F revealed that both were predicted to encode putative PMEs that have been reported to play critical roles in regulating pollen tube growth.
- Both ZmGa2F and ZmGa2P encode group I pectin methylase.
- ZmGa2F candidate gene of the male determinant of Ga2.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 103627040
- UniProt accessions: B6TF29
- EMBL: CM000780 , EU963594
- EnsemblPlants: Zm00001eb175950_T001
- Gramene: Zm00001eb175950_T001
- KEGG: zma:100283148
- OMA: ANACEGY
- ExpressionAtlas: Zm00001eb175950
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050295
- PANTHER: PTHR47991
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: B6TF29
- SMR: B6TF29
Homologs
- Arabidopsis thaliana: AT3G13610, AT3G11180, AT3G12900, AT1G03410
- Brassica napus: BnaTT18.C01, BnaTT18.A01, BnaTT18.C07, BnaTT18.A03
- Citrus sinensis: orange1.1g018369m.g
- Lactuca sativa: gene-LSAT_9X53021
- Musa acuminata: Ma02_g01570, Ma08_g15080, Ma00_g04460
- Oryza sativa: SLC1, SLC2, OsSAH3;OsS5H1, OsF3H04g;OsSAH2, OsF3H03g;OsS5H2, OsHSL1, FLS, HIS1
Sequences
cDNA Sequence
- >Zm00001eb175950_T001
ACCACACGAATTGCACATCTCCACAGCTCACGATTCCAACACTAGCTACATATATATGTAGCTTTCTAGGCTACTATATACACTCACCACCAAGTGTGAAGTGTGTATATATAGTGACAGCTACTGCAATATATACATACGCGTCACCTATATATTAGCCAAGCTAGCTATATGAGCTTGGTTGCGGCGCCAATGGCGATCGTCGACGTGGCCAACGCCCAGCTGCAGCAAGCAGCAGCAGCAGCTGCCAAGAAAGACGAGGACGGCCATGAGCAGCAGGAGTCGTCCTACGACTACGGCGCGCTGATGAAAGGCGTGAGGCACCTGTCGGACAGCGGCATTACCAGGCTGCCCGACAGGTACGTCCTGCCCGCGTCCGACCGCCCCGGCGTCCTTGCCGTCTCGTCGTCCGTGGCGGGCAGCGGCAGGGTCAAGCTCCCTGTCGTCAACCTCGCCGGCCTCCGCGACCCCTGCCAGCGCGCCGCCGTGCTGGCCACGCTCGACGCCGCGTGCCGGGAGTACGGCTTCTTTCAGGTGGTAAACCACGGGTTCGGGAGCGACGTGAGCGGCGGGATGCTGGACGTGGCGCAGCGCTTCTTCGAGCTGCCGCTGGCCGAGCGAGCGCGGCACATGTCGGCGGACGTGCGGGCGCCGGTGCGCTACGGCACCAGCTTCAACCAGGCCAAGGACGACGTGCTCTGCTGGCGCGACTTCCTCAAGCTCGTCTGCCAGCCGCTGCAGGCGGTGCTCCCGTACTGGCCCCAGCAGCCGGCGGACCTCAGGGACGTGGCCACCAGGTACGCCACGGCGAGCCACCGGCTGTTCATGGAGGTCATGGAGGCGGCGCTGGAGGCCCTGGGCATCCCCACGGCCGGCGGCGTGCTCGGGGAGCTGGCAGCGTCGTCGTCGCACATGATGACGGTGAACTGCTACCCGGCGTGCCCGCAGCCTGAGCTCACGCTGGGGATGCCCTCGCACTCGGACTACGGCCTCTTCACGTTCGTCCTGCAGGACCACGTCGAGGGCCTCCAGGTCATGCACGACGGCCGCTGGCTCACCATCGACCCCATCCCGGGATCGTTCGTCGTCAACGTCGGCGACCACCTAGAGATCTACAGCAACGGGCGGTACAAGAGCGCGCTGCACCGGGTGCACGTGAACTCCACGCGGCCGCGCATCTCGGTGGCGTCGTTCCACAGCCTGCCGGCGGAGCGAGTGATCGGGCCGGCGCCGGAGCTGGTGGACGACGAGGCCGGCAACCCGCGGCGGTACATGGACACCGACTTCGCTACCTTCCTCGCCTACCTCGCATCCGCGGACGGCAAGAACAAGACCTTCCTCCAGTCAAGGAAGCTGCCTGCTGCTGCTCCTCCATGCCTCTAGCTAACTAGATAGCTGCTTATTAATCTGACAGAATAAAATTAATCAGTTCAGCGCACAATTCCACAAGCGAAAACAAACCTGGATTTGTTTTAATTAGCTCTGCCCTTCATTATTACATTCAAGCTAGCTCTTGGTCAACGCATGCACACAAGCTTGAGCATTGACTGGTCCCTTTTCAATCGGTTGCATTGTACTCC
CDS Sequence
- >Zm00001eb175950_T001
ATGAGCTTGGTTGCGGCGCCAATGGCGATCGTCGACGTGGCCAACGCCCAGCTGCAGCAAGCAGCAGCAGCAGCTGCCAAGAAAGACGAGGACGGCCATGAGCAGCAGGAGTCGTCCTACGACTACGGCGCGCTGATGAAAGGCGTGAGGCACCTGTCGGACAGCGGCATTACCAGGCTGCCCGACAGGTACGTCCTGCCCGCGTCCGACCGCCCCGGCGTCCTTGCCGTCTCGTCGTCCGTGGCGGGCAGCGGCAGGGTCAAGCTCCCTGTCGTCAACCTCGCCGGCCTCCGCGACCCCTGCCAGCGCGCCGCCGTGCTGGCCACGCTCGACGCCGCGTGCCGGGAGTACGGCTTCTTTCAGGTGGTAAACCACGGGTTCGGGAGCGACGTGAGCGGCGGGATGCTGGACGTGGCGCAGCGCTTCTTCGAGCTGCCGCTGGCCGAGCGAGCGCGGCACATGTCGGCGGACGTGCGGGCGCCGGTGCGCTACGGCACCAGCTTCAACCAGGCCAAGGACGACGTGCTCTGCTGGCGCGACTTCCTCAAGCTCGTCTGCCAGCCGCTGCAGGCGGTGCTCCCGTACTGGCCCCAGCAGCCGGCGGACCTCAGGGACGTGGCCACCAGGTACGCCACGGCGAGCCACCGGCTGTTCATGGAGGTCATGGAGGCGGCGCTGGAGGCCCTGGGCATCCCCACGGCCGGCGGCGTGCTCGGGGAGCTGGCAGCGTCGTCGTCGCACATGATGACGGTGAACTGCTACCCGGCGTGCCCGCAGCCTGAGCTCACGCTGGGGATGCCCTCGCACTCGGACTACGGCCTCTTCACGTTCGTCCTGCAGGACCACGTCGAGGGCCTCCAGGTCATGCACGACGGCCGCTGGCTCACCATCGACCCCATCCCGGGATCGTTCGTCGTCAACGTCGGCGACCACCTAGAGATCTACAGCAACGGGCGGTACAAGAGCGCGCTGCACCGGGTGCACGTGAACTCCACGCGGCCGCGCATCTCGGTGGCGTCGTTCCACAGCCTGCCGGCGGAGCGAGTGATCGGGCCGGCGCCGGAGCTGGTGGACGACGAGGCCGGCAACCCGCGGCGGTACATGGACACCGACTTCGCTACCTTCCTCGCCTACCTCGCATCCGCGGACGGCAAGAACAAGACCTTCCTCCAGTCAAGGAAGCTGCCTGCTGCTGCTCCTCCATGCCTCTAG
Protein Sequence
- >Zm00001eb175950_P001
MSLVAAPMAIVDVANAQLQQAAAAAAKKDEDGHEQQESSYDYGALMKGVRHLSDSGITRLPDRYVLPASDRPGVLAVSSSVAGSGRVKLPVVNLAGLRDPCQRAAVLATLDAACREYGFFQVVNHGFGSDVSGGMLDVAQRFFELPLAERARHMSADVRAPVRYGTSFNQAKDDVLCWRDFLKLVCQPLQAVLPYWPQQPADLRDVATRYATASHRLFMEVMEAALEALGIPTAGGVLGELAASSSHMMTVNCYPACPQPELTLGMPSHSDYGLFTFVLQDHVEGLQVMHDGRWLTIDPIPGSFVVNVGDHLEIYSNGRYKSALHRVHVNSTRPRISVASFHSLPAERVIGPAPELVDDEAGNPRRYMDTDFATFLAYLASADGKNKTFLQSRKLPAAAPPCL