Information report for SLC2
Gene Details
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Functional Descriptions
- Down-regulation of SLC1 and SLC2 at the same time in the SLC1-SLC2 RNAi lines resulted in a severe defect in early leaf development.
- Here, we report that two dioxygenase-encoding genes, SLC1 (slender and crinklyleaf 1) and SLC2 (slender and crinklyleaf 2), play essential roles in shoot development and SA production in rice (Oryza sativa).
- Collectively, our data revealed the importance of SLC1 and SLC2 in the shoot development of rice.
- Disruption of SLC1 or SLC2 led to dwarf plants.
- Enhanced SA level in the SLC1-OE plants and decreased SA level in the slc1 and SLC2 mutants were scored.
Functional Keywords
- leaf , leaf-development , shoot , development , dwarf , sa , SA
Literature and News
Gene Resources
- UniProt: Q651B6
- EMBL: AP006162, AP008215, AP014965
- AlphaFoldDB: Q651B6
- EnsemblPlants: Os09t0570800-01
- Gramene: Os09t0570800-01
- KEGG: dosa:Os09g0570800, osa:4347916
- InterPro: IPR005123, IPR026992, IPR027443
Homologs
- Arabidopsis thaliana: AT3G11180, AT3G13610, AT3G12900
- Brassica napus: BnaTT18.C01, BnaTT18.C07
- Daucus carota: DCAR_015874
- Glycine max: GmF3H1
- Lactuca sativa: gene-LSAT_9X53021
- Manihot esculenta: MANES_12G096800
- Musa acuminata: Ma08_g15080
- Rosa chinensis: RchiOBHm_Chr1g0353791, RchiOBHm_Chr1g0353771
Sequences
cDNA Sequence
- >LOC_Os09g39720.1
CTTTTAATCATCTACTCCCACCCTAATTTAATTTAGACGGACCTAGTTAATGGCCATCCTGGAGAGAGCAGAGGAAGCCAACATCGGCGAAGGCTCAGGCTCGTCGGAGTGGGAGCTGGGCGTCCGGCAGCTGTGCGACAGCGGCATCACCACCCTGCCCGCCCGCTACGTCCTCCCGCCCGCCGACCGCCCCGCCCGCTACGTCACACCACCTGCTCTGCTCCCCGTCGTCGACCTTGCCGCCCTCCGTGCTCGAGACCCCTGTCAGCTCGCCGCGCTCCACGCCGCCTGCCGGGACTACGGCTTCTTCCAGCTTCTCAACCACGGCGTGCCCCCCGACGCCATGCTGTACGCCGCTCGCCGCTTCTTCTTCGACCTTCCCCTGCCCGCCCGTAAGCGCTACATGTCCGCCGACATCCGCGCCGCCGTCCGCTACGGCACCAGCTTCAACCAGCTCAACGACGCCGTCCTCTCCTGGCGCGACTTCCTCAAGCTACTCATCCGCGACACGCGCCGCCTCGCCGACGTCCTCCCCTCCTGGCCCGACGCCCCCGACGACCTCAGGCCGGCCGCCGCGGCGTACGCCACGGCGTGCCAGAGGCTGTTCCGGGAGCTCATGGAGGCGGCGCTGGATGCGCTGGGCATCGTGCGGTGCCGCCGCCAGCTGCTGGAGGAGTGCGACGCCGGGTCGCAGATGATGATGGTCAACTGCTTCCCGGCGTGCCCGGAGCCGGAGCTGACGCTGGGCATGCCGCCGCACTCCGACTACGGCCTGCTAACCATCCTCCTGCAGGACGAGGTGAGAGGGCTGGAGGTGAGCTACGGCGACGGCGGCGGGTGGGCGGTGGTGGAGCCGCTTCCCGGCGCGGTGGTGGTGAACGTGGGCGACCACCTGGAGATACTGAGCAACGGGCTGTACCGGAGCGTGCTGCACCGTGTGCGCGTGAACGGTCGGCGGGCGCGCGTGTCGGTGGCGTCGCTGCACAGCCTGGCGGCGGAGCGTGTGATCGGGCCGGCGGCGGAGCTGGTGGACGAGCAGCGGGGCAGGCCGCGGCGGTACATGGACACCGACATGGCCGCGTTCCTTGCCTACCTCGCCTCCGCAGAGGGCAACCACAAGTCCTTCCTCCACTCCCGCAGGATCAACACCATTTCTTCTTCCGGACTGACCCAACCCAGCAACTAAATTAATTAGCTGGACGTACGGACTCTCTATCTAATTACTAGTCGCCAAATTAAGAGTACGTCGTCCCTTCTAGCTAGTTCCTATACAAACATATCCACCCTGGTTGCAACTGTAGTGTTAAGCTAGCACGGAATCCATCACTGTACAAGCATGTGTGTACGTGCAGTGATTTAATTAATTAATTTGCTGAAAAATAATCCAAATTATATATTGTTAGGACGGT
CDS Sequence
- >LOC_Os09g39720.1
ATGGCCATCCTGGAGAGAGCAGAGGAAGCCAACATCGGCGAAGGCTCAGGCTCGTCGGAGTGGGAGCTGGGCGTCCGGCAGCTGTGCGACAGCGGCATCACCACCCTGCCCGCCCGCTACGTCCTCCCGCCCGCCGACCGCCCCGCCCGCTACGTCACACCACCTGCTCTGCTCCCCGTCGTCGACCTTGCCGCCCTCCGTGCTCGAGACCCCTGTCAGCTCGCCGCGCTCCACGCCGCCTGCCGGGACTACGGCTTCTTCCAGCTTCTCAACCACGGCGTGCCCCCCGACGCCATGCTGTACGCCGCTCGCCGCTTCTTCTTCGACCTTCCCCTGCCCGCCCGTAAGCGCTACATGTCCGCCGACATCCGCGCCGCCGTCCGCTACGGCACCAGCTTCAACCAGCTCAACGACGCCGTCCTCTCCTGGCGCGACTTCCTCAAGCTACTCATCCGCGACACGCGCCGCCTCGCCGACGTCCTCCCCTCCTGGCCCGACGCCCCCGACGACCTCAGGCCGGCCGCCGCGGCGTACGCCACGGCGTGCCAGAGGCTGTTCCGGGAGCTCATGGAGGCGGCGCTGGATGCGCTGGGCATCGTGCGGTGCCGCCGCCAGCTGCTGGAGGAGTGCGACGCCGGGTCGCAGATGATGATGGTCAACTGCTTCCCGGCGTGCCCGGAGCCGGAGCTGACGCTGGGCATGCCGCCGCACTCCGACTACGGCCTGCTAACCATCCTCCTGCAGGACGAGGTGAGAGGGCTGGAGGTGAGCTACGGCGACGGCGGCGGGTGGGCGGTGGTGGAGCCGCTTCCCGGCGCGGTGGTGGTGAACGTGGGCGACCACCTGGAGATACTGAGCAACGGGCTGTACCGGAGCGTGCTGCACCGTGTGCGCGTGAACGGTCGGCGGGCGCGCGTGTCGGTGGCGTCGCTGCACAGCCTGGCGGCGGAGCGTGTGATCGGGCCGGCGGCGGAGCTGGTGGACGAGCAGCGGGGCAGGCCGCGGCGGTACATGGACACCGACATGGCCGCGTTCCTTGCCTACCTCGCCTCCGCAGAGGGCAACCACAAGTCCTTCCTCCACTCCCGCAGGATCAACACCATTTCTTCTTCCGGACTGACCCAACCCAGCAACTAA
Protein Sequence
- >LOC_Os09g39720.1
MAILERAEEANIGEGSGSSEWELGVRQLCDSGITTLPARYVLPPADRPARYVTPPALLPVVDLAALRARDPCQLAALHAACRDYGFFQLLNHGVPPDAMLYAARRFFFDLPLPARKRYMSADIRAAVRYGTSFNQLNDAVLSWRDFLKLLIRDTRRLADVLPSWPDAPDDLRPAAAAYATACQRLFRELMEAALDALGIVRCRRQLLEECDAGSQMMMVNCFPACPEPELTLGMPPHSDYGLLTILLQDEVRGLEVSYGDGGGWAVVEPLPGAVVVNVGDHLEILSNGLYRSVLHRVRVNGRRARVSVASLHSLAAERVIGPAAELVDEQRGRPRRYMDTDMAAFLAYLASAEGNHKSFLHSRRINTISSSGLTQPSN*