Information report for MDP0000275412
Gene Details
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Functional Annotation
- Refseq: XP_008341347.1 — trihelix transcription factor GT-4-like
- TrEMBL: A0A4D9AJH1 — A0A4D9AJH1_SALSN; Glyceraldehyde 3-phosphate dehydrogenase
- STRING: XP_008341347.1 — (Malus domestica)
- GO:0006006 — Biological Process — glucose metabolic process
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0016620 — Molecular Function — oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
- GO:0050661 — Molecular Function — NADP binding
- GO:0051287 — Molecular Function — NAD binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Actinidia chinensis: Achn020701, Achn089301
- Arabidopsis thaliana: AT3G04120
- Cajanus cajan: C.cajan_02738
- Glycine max: Glyma.18G010000.1.p, Glyma.11G247300.1.p
- Manihot esculenta: Manes.13G014800.1.p
- Oryza sativa: OsGapC2, OsGAPDH1, OsGAPC3
- Prunus mume: XP_008231180.1, XP_008222027.1, XP_008222025.1
- Prunus persica: Prupe.3G300500.1.p, Prupe.1G235200.1.p
- Pyrus bretschneideri: Pbr012489.1, Pbr014466.2
Sequences
CDS Sequence:
- >MDP0000275412|Malus_domestica|Trihelix|MDP0000275412
ATGTACCTCTTGGAGAAGCCCCGCGCCGTTGACTTATACAAGGGAGGAGGACTAGACCAAGAAACGGAGACAGAGATGATGATGGATGTGGCGGCGGTGAATGGGAGAGCGCCACCTCACCACCAAAACCAAAACGAACGAGAGCAGCAGCAGAGCAGCGGTGGCGAGGGGGAGGAGCAGGAATTGTGTGCGGCTGTGAGCAGCAGAGCAGGAGGCGGTCCGGGCGGTGCCGCCGGGCCGAAGAAACGGGCGGAGACGTGGGTCCAGGAGGAGACCCGGAGCTTGATAGGGTTTAGGAGAGAGGTAGACGGGCTTTTCAACACGTCAAAGTCCAACAGGCACCTGTGGGACCAGATCTCGGCGCGGATGAGGGAAAAGGGCTTCGACCGATCGCCCACCATGTGTACGGACAAGTGGCGGAACTTGCTCAAGGAGTTCAAGAAGGCTCGCCACCAAGTTAAAGTCGGTGCTCGCTCTGCCAAGATGTCTTATTACGAGGACCTCCAGGACTTGCTCAGAGATCGCTCCACCAATTCCAACTCCGCCACCGCCAACAGCAACCACAATTCTGTTTCTGCTGCCGCCGCCGCCGTTGCCACTCCTCCCAAGTTAGATTCTTTCGTTCGATTTTCTGATAAAGGTCTTGAGGATTCAACTATTCCATTTGGGCCTATGGAAGCTAATGACCGATCGGCGCTCAATTTGGAGAGGCAGCTGGATCACGACGGCGGTGACCCGCTTGCTATTACTGCCGCGGATGCGGTTGCAGTCAATGGGGTTCCTCCTTGGAACTGGAGGGAGGGTCCTGAAAACGGAGGGGAGGACCACTCTTCTTACTGTGGAAGGATTATAACTGTCAAATTGGGGGAATACACCAGAAGGATTGGAATTGATGGGACTGGTGAAGCAATTAAGGAGGCGATCAAGTCTGCGTTCAGAATAAGAACTAAGCGGGCATTTTGGTTGGAGGACGAAGATCAGGTTGTTCGAAGTCTTGATAGGGATATGCCTTTGGGAAATTACACTCTCCACCTTGACGAAGGAATTACAATCAAACTTTGCCTCTACGATGACTCTGACCGCATAGTTCGAACTGAAGAAATAACATTGTACACTGAGGATGATTTTCGTGATTTTCTTGCACGCCGAGGCTTGATGGGTTTGAGAGAGTTAAGTGGCTACAGACGCATCGATACTTTAGATGATCTTCATTCTGGATTCGGAAGGATTGGCCGCTTGGTGGCCAGGGTTGCTCTGCAGAGAGACGACATTGAGCTTGTCGCTGTCAACGATCCTTTCATCAACATCGAATACATGAGCTACATGTTTAAGTACGACACGGTTCACGGGCAATGGAAGCACCACGAGCTTAAGGTTAAGGATGATAAGACCCTTCTCTTTGGTGACAAGCCAGTCAAAGTGTTCGCTTCTAGGGACCCCGAACAGATCCCGTGGGGGGAGGCCGGAGCGGAATATGTGGTCGAGTCCACCGGAGTTTTCACCGATAAGGAAAAAGCCTCTCTGCACTTAAAGGGTGGTGCAAAGAAGGTTATCATTTCTGCCCCAAGTAAGGACGCCCCAATGTTTGTTGTGGGTGTCAATGAGAAGGAGTACAAGCCAGATCTTGACATTGTCTCCAATGCCAGTTGCACTACCAACTGTCTTGCCCCATTGGCAAAGGTTATTCATGACAAGTTTGGTATTGTGGAGGGTCTTATGACTACCGTCCATTCTATTACTGCCACTCAAAAGACTGTTGACGGACCRTCGATGAAAGAYTGGAGAGGTGGCAGAGCTGCTGCTACCAACATCATTCCCAGCAGTACTGGAGCTGCCAAGGCCGTGGGGAAAGTGCTGCCCGCATTGAACGGGAAGTTGACGGGAATGGCATTCCGTGTTCCCACGGTGGATGTTTCGGTGGTTGATCTCACGGTGAGACTTGAGAAGAAGGCCACTTACGACGAGATCAAAAATGCCATCAAGAAAGAATCAGAGGGCAGCATGAAGGGAATCCTCGGATATACTGACGAAGATGTGGTGTCGACGGACTTTGTGGGCGATAACCGGTCGAGCATTTTCGATGCCAAGGCTGGAATTGCTTTGAACGACAACTTTGTGAAGCTTGTGTCTTGGTATGACAACGAGTGGGGTTATAGGTAA
Protein Sequence:
- >MDP0000275412|Malus_domestica|Trihelix|MDP0000275412
MYLLEKPRAVDLYKGGGLDQETETEMMMDVAAVNGRAPPHHQNQNEREQQQSSGGEGEEQELCAAVSSRAGGGPGGAAGPKKRAETWVQEETRSLIGFRREVDGLFNTSKSNRHLWDQISARMREKGFDRSPTMCTDKWRNLLKEFKKARHQVKVGARSAKMSYYEDLQDLLRDRSTNSNSATANSNHNSVSAAAAAVATPPKLDSFVRFSDKGLEDSTIPFGPMEANDRSALNLERQLDHDGGDPLAITAADAVAVNGVPPWNWREGPENGGEDHSSYCGRIITVKLGEYTRRIGIDGTGEAIKEAIKSAFRIRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGITIKLCLYDDSDRIVRTEEITLYTEDDFRDFLARRGLMGLRELSGYRRIDTLDDLHSGFGRIGRLVARVALQRDDIELVAVNDPFINIEYMSYMFKYDTVHGQWKHHELKVKDDKTLLFGDKPVKVFASRDPEQIPWGEAGAEYVVESTGVFTDKEKASLHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKPDLDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAAATNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKKATYDEIKNAIKKESEGSMKGILGYTDEDVVSTDFVGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYR