Information report for GSMUA_Achr4P29130_001
Gene Details
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Functional Annotation
- Refseq: XP_009398860.1 — PREDICTED: trihelix transcription factor GTL1-like
- TrEMBL: M0ST25 — M0ST25_MUSAM; Uncharacterized protein
- STRING: GSMUA_Achr4P29130_001 — (Musa acuminata)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Brachypodium distachyon: Bradi3g30457.3.p
- Fragaria vesca: mrna01828.1-v1.0-hybrid
- Juglans regia: WALNUT_00025256-RA
- Panicum virgatum: Pavir.9NG788800.1.p, Pavir.9KG561300.2.p, Pavir.9KG561300.1.p
- Salvia miltiorrhiza: SMil_00007552-RA_Salv
- Sesamum indicum: XP_011081350.1, XP_011081349.1
- Vitis vinifera: GSVIVT01019722001
- Zea mays: GRMZM2G414159_P01
Sequences
CDS Sequence:
- >GSMUA_Achr4P29130_001|Musa_acuminata|Trihelix|GSMUA_Achr4P29130_001
ATGAGAGGATCTTTTAGTTTGATGTATCACGAACTTCAACAAGTAAATTATACAGGAAGAGAAACAAATACCATCTTAGTTGCAGAGAAGGAGAAGGCAAAGAAAGACATGCAGCTGCAGCGAGGAGGGGCGCAGTACGGGGTGCCGCTGCCCGAAATTCCAGGTCGCGAGGCGGAGGCAGCGTCGCCCATTAGCGGCCGGCCGCCAGCGGGCGCCCCGCTTGCGAATTTTGACAAAGTCGGTCCCGCCGCAGCAGGCAACTCTCCGGACGACGAGGTTCTTGCCACAGGTGAGGAGGCCGAGAGGGGCGGTGGTGGCGTCACCGGGAACCGGTGGCCGCTGCAGGAGACGCTCACCCTGTTGAAGATCCGGTCCGAGATGGACGCCGCCTTCCGGGACGCCACACTCAAGGCTCCTCTTTGGGAGGAGGTCTCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATTCTCGTTTCCTTTGAGTAGCTCGAGAGACAGCCAAGTAACTATCTGGCGTCAAGTTCGTACCACGGACTCCTTGCTGCAGCAATGGTTGCAGCAGCTGAGCTACTTTTCTGGGGAAAGAAACGAAAAGCTAGCAGAGCTCGGTTACAAGAGGACCGCCAAGAAGTGCAAGGAGAAGTTCGAGAACGTGAACAAGTACTACAAGCGCACCAAAGAAGGCCGCGCCGGCCGCCAGGACGGCAAGGGCTACCGCTTCTTCAGCCAGCTCGAAGCCCTCCGTAGTGGCAGCAGCGCCGCCGTTACACCCGCCGCTCCTGTCCCTTCCACCCTCGTCGCCACCTCGTCCGCCTTCAGCGCCAGCTTGCTGACCCCTCCCGGTGGCGCGCAGAGAATCTCCAGTTCCGCTGCCGTCGCCGTCTCCGCCGCTGCCGCCGGCATCGGCTTCTCGTCGAATTCTTCATCTTCTGAATGGTTCGAGTCCGATGACGAGGAGACTGACGGCGAGAGCCAGGAAGGGAGGAAGCGGAAGAGCAACGGCGGGGGCTCGGGACCTAGCAGGAAGATGATGCCTTTCTTCCATCGGCTGATGAAGCAGGTGATGGAGCGGCAGGAGGCCATGCAGCAGAGGTTCTTGGATGCCATGGAGAAGAGGGAGCAGGACAGGATGATCCGGGACGAGGCTTGGCGGCGGCAGGAGATGACGCGGCTCAACCGTGAGCAGGAGCTCTTAGAGCAGGAGTGGGCGATGGCCTCGTCCAGAGACACCGCCATTATCTCCTATCTTCAGAAGTTAACCGGCCGGACCATCCCCATGCCCACAATGTCTGCTATTCCTCTCTCCATCTCGCCATTCCCGCAGCAGCAGTCGCATACTCCGCCGCCACAACCAGCCGCTCCTCAGCTGCCCTCGGAGCCCATGTCGTCATCCTCGCGATGGCCAAAGGCGGAGGTGCATGCGTTGATCAAGCTCCGCAGCGAGCTTGAGTCGAAGTACCAGGAGACCGGGCCGAAGGGGCCACTGTGGGAGGAGATTTCAGCCGGAATGCAGCGGCTTGGCTACAAACGTAGCGCCAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTAAAGGAGAGCAACAAGAAGCGGCCCGAGGACTCCAAGACCTGCTCTTACTTCCACCAATTGGACGCCCTCTACCGCAACAAGCTCCTCGGCACCGGCAACACCATGGGAAGTCCCGCTTCCAATCAACGGCAGAGTGACACACCAAGGAACATGTCGCAACAGCAAGCACCACCACCACCTCCACCGCCGCCTCAACCTGCCGCAGAGCCCGAAAGCAAGAATGCTACACGAACACAAACTACCAATGGATCACTTCATATGATCTTTTCTGACCAAGGATTGGAAAAGGTAAGCACTGTGATCAACGACTACGACAAGTTGGACCAAACTGACAGCGACAACATGAACCAAGACGACGACGACGACGAAGGGAAACTGCACTACAAGATACAATTCCAGAGAAAGAGCATGAGCGCCGGCGGCGGAGGGAATCCATCGACGGCGGCCTCAGCAACCGCGAGAGGGGAACAAGAAAAGCCGGTACAGAGAGGGAGACTAAATACTAAATGA
Protein Sequence:
- >GSMUA_Achr4P29130_001|Musa_acuminata|Trihelix|GSMUA_Achr4P29130_001
MRGSFSLMYHELQQVNYTGRETNTILVAEKEKAKKDMQLQRGGAQYGVPLPEIPGREAEAASPISGRPPAGAPLANFDKVGPAAAGNSPDDEVLATGEEAERGGGGVTGNRWPLQETLTLLKIRSEMDAAFRDATLKAPLWEEVSREREREREREIFSFPLSSSRDSQVTIWRQVRTTDSLLQQWLQQLSYFSGERNEKLAELGYKRTAKKCKEKFENVNKYYKRTKEGRAGRQDGKGYRFFSQLEALRSGSSAAVTPAAPVPSTLVATSSAFSASLLTPPGGAQRISSSAAVAVSAAAAGIGFSSNSSSSEWFESDDEETDGESQEGRKRKSNGGGSGPSRKMMPFFHRLMKQVMERQEAMQQRFLDAMEKREQDRMIRDEAWRRQEMTRLNREQELLEQEWAMASSRDTAIISYLQKLTGRTIPMPTMSAIPLSISPFPQQQSHTPPPQPAAPQLPSEPMSSSSRWPKAEVHALIKLRSELESKYQETGPKGPLWEEISAGMQRLGYKRSAKRCKEKWENINKYFKKVKESNKKRPEDSKTCSYFHQLDALYRNKLLGTGNTMGSPASNQRQSDTPRNMSQQQAPPPPPPPPQPAAEPESKNATRTQTTNGSLHMIFSDQGLEKVSTVINDYDKLDQTDSDNMNQDDDDDEGKLHYKIQFQRKSMSAGGGGNPSTAASATARGEQEKPVQRGRLNTK