Information report for Zm00001eb220250
Gene Details
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Functional Annotation
- Refseq: NP_001167728.1 — uncharacterized protein LOC100381416
- Refseq: XP_008643913.1 — uncharacterized protein LOC100381416 isoform X1
- TrEMBL: C0HFU9 — C0HFU9_MAIZE; Trihelix transcription factor GT-2
- STRING: Zm00001eb220250 — (Zea mays)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Brachypodium distachyon: Bradi3g30457.2.p, Bradi3g30457.1.p, Bradi3g30457.3.p
- Setaria italica: Seita.9G570100.2.p, Seita.9G570100.1.p
- Triticum aestivum: Traes_1BL_A5A91DE10.1
Sequences
CDS Sequence:
- >Zm00001eb220250|Zea_mays|Trihelix|Zm00001eb220250
ATGCAGCAGCAGCAGCACGGGGGAGGCGGCGGAGCAAGCGGTGGAGGCCCAGCGCAGCAGTTCTGCGCACAGCAGGTGGAGATGCCGCTGCCATTCTCGCCGGTCGGCGGCGCTGGGCAGCGGATCTCGCTGGCGGAGGCACCGTCGCCCATCAGCAGCCGGCCGCCGGCGCCGGCGCCGGCTCAGCAGTATGACGAGCTCGGCCCGTCCGGCGCCGGCGCAGTGGGCTTTGACGCCGAGGGCCTGGCCGCCGCCGCAGCTGGTGAGGATGGCGCCAGCGGCGGCTCGGCGGGCAACCGGTGGCCGCGGCAGGAGACGCTGGAGCTGCTCAAGATCCGGTCGGACATGGACACCGCCTTCCGGGACGCCACCCTCAAGGCCCCCCTCTGGGAGCAGGTCTCCAGGAAGCTGGCTGAGAAAGGGTACAACCGGAGCGCCAAGAAGTGCAAGGAGAAGTTCGAGAACGTGCACAAGTACTACAAGCGCACAAAGGAGAGCCGCGCCGGCCGGAACGACGGCAAGACGTACCGATTCTTCACGCAGCTGGAGGCCCTGCACGGCACCGGAGCGGCTCCCGCGTCGGTGGCGTCGCAGGTGGGCCCGGCAATCTCCGGCGGGGTGTCCGGGGCAGCCCGGCCGTCGTCGGCCGTGCGCGTGCCTGCCGAGCCGCTGCCTGCGGTGTCGGCCGGCGTGGGAATGCCGATGACGACGACGGTGGGCTACCCGAGCATCTCGACGTCCAACACGGAGGACGACTACACGGACGAGGACGACTCCGACGACGAGGGCACGGAGGAGCTGGTGGGCGGCGGCGCGGACGATCAGCGCAGGAAGAGGAAGAGGGTGTCGGACGGCAGCGGGAAGATGATGAGGTTCTTCGAGGGCCTGATGAAGCATGTGATGGACCGTCAGGAGGCGATGCAGCAGAGGTTCTTGGAGGCCATCGAGAAGCGTGAGCAGGACCGCATGATCCGCGAGGAGGCGTGGCGGCGGCAGGAGATGACTCGCCTAGCGCGCGAGCAGGAGATCCTGGCGCAGGAGCGCTCTATGGCAGCCTCACGCGACGCTGCCGTCCTCTCCTTCATACAGAAGATCACCGGGCAGACCATCCCGATGCCATCCATTGCCGCGCCCACCATCAACGCCATGCCACCGCCGTCGCATCCGAAGCCGCCGCCGCCCCCTCAGCCGCACCCCACACCCATTGCCTCCGTGTCGCCAGCCCCGCCGCCACCGCAACCACCAGCTTCGCAGACTCCGCCCCCGCAGCAGCAGAAGTCGCCAATGCCGGCGACGCCACAAACGCCAGCACCGCAACGGCAAAGCACAGACATTGTTATGACACCGGCCGAGACGACGCCGCACGCCGACACCCAGGGGCACGAGGGGTCCGGTGGCGGCGCGACGTCGTCCCGGTGGCCGAAGGCTGAGGTTCACGCGCTGATACAGCTGCGGAGCACCCTTGACACGCGGTACCAGGAGACCGGGCCCAAAGGGCCCCTCTGGGAGGAGATCTCCGCCGGCATGCGGGGCATGGGTTACAACCGGAACGCGAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAAGCGTCCCGAGGACTCCAAGACGTGCCCCTACTTCCACCAGCTCGACGCACTCTACCGCAACAAGGCGGCGATCACCTCATCCTCCGGCGCCGGAGCCATGGTGCACGCTAACGCATCGTCGGCACCGCAGGAGATGGTCACGGTCACGGCCGCGACGCCCATCTCACAGACGCCGCCGCCTCCAACACAGCCTTCCCAGTCCCATCACGCGGCGAAGAACGGCGGCAGCAGCAACTCCGCTGGCACAGGCACTGGGAACGGCAGCTACGCATCAGAGCACGGCTCCAGGGGCATGCAAACGCAGGCGAGCAACGGCAGCGCTGCAGCCAGCATGTTCGTCGGCCTCGGCGGCGGCGCGGCCTCGGCAGCGAAGAAGCCAGAGGAAATCATGAAGGAGATGATAGAGCAGAGGCAGCCGCAGCAGCCGCAGGCGGTGGTAGGCGGCTACAACAGAATGGACGGCGCGGGCAGCAACAATATGGACGACGACGACGACGACGATGAAGACGACTACGATGAGAACGATAACGACGAAGATGACGCCGGCAACAAAATGCAGTACGAGATCCAGTTCCAGCACCACCATCAGCATCCGAACGTTGTCAGGTCGAACGCCGGCGCCGGTGGTGGCAACCCGCCCGGCACCACCGCGCCCAGCACGGCTGCGGCCCCGACAACAACAGCCGGATCTTTCTTGGGCATGGTCCAGTGA
Protein Sequence:
- >Zm00001eb220250|Zea_mays|Trihelix|Zm00001eb220250
MQQQQHGGGGGASGGGPAQQFCAQQVEMPLPFSPVGGAGQRISLAEAPSPISSRPPAPAPAQQYDELGPSGAGAVGFDAEGLAAAAAGEDGASGGSAGNRWPRQETLELLKIRSDMDTAFRDATLKAPLWEQVSRKLAEKGYNRSAKKCKEKFENVHKYYKRTKESRAGRNDGKTYRFFTQLEALHGTGAAPASVASQVGPAISGGVSGAARPSSAVRVPAEPLPAVSAGVGMPMTTTVGYPSISTSNTEDDYTDEDDSDDEGTEELVGGGADDQRRKRKRVSDGSGKMMRFFEGLMKHVMDRQEAMQQRFLEAIEKREQDRMIREEAWRRQEMTRLAREQEILAQERSMAASRDAAVLSFIQKITGQTIPMPSIAAPTINAMPPPSHPKPPPPPQPHPTPIASVSPAPPPPQPPASQTPPPQQQKSPMPATPQTPAPQRQSTDIVMTPAETTPHADTQGHEGSGGGATSSRWPKAEVHALIQLRSTLDTRYQETGPKGPLWEEISAGMRGMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRNKAAITSSSGAGAMVHANASSAPQEMVTVTAATPISQTPPPPTQPSQSHHAAKNGGSSNSAGTGTGNGSYASEHGSRGMQTQASNGSAAASMFVGLGGGAASAAKKPEEIMKEMIEQRQPQQPQAVVGGYNRMDGAGSNNMDDDDDDDEDDYDENDNDEDDAGNKMQYEIQFQHHHQHPNVVRSNAGAGGGNPPGTTAPSTAAAPTTTAGSFLGMVQ