Information report for Thecc1EG042118t3
Gene Details
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Functional Annotation
- Refseq: XP_017983247.1 — PREDICTED: RNA polymerase I termination factor
- Refseq: XP_017983248.1 — PREDICTED: RNA polymerase I termination factor
- TrEMBL: A0A061H0A4 — A0A061H0A4_THECC; Cyclin-D-binding Myb-like transcription factor 1 isoform 1
- STRING: EOY34439 — (Theobroma cacao)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn003861, Achn003881
- Beta vulgaris: Bv6_147180_trfu.t1, Bv1_022230_yyxp.t1
- Citrullus lanatus: Cla021275
- Citrus sinensis: orange1.1g014781m
- Gossypium arboreum: Cotton_A_10508_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A13G2022, Gh_D13G2423
- Populus trichocarpa: Potri.015G095000.2, Potri.015G095000.3, Potri.015G095000.4, Potri.015G095000.1, Potri.003G168900.2, Potri.003G168900.1
Sequences
CDS Sequence:
- >Thecc1EG042118t3|Theobroma_cacao|MYB_related|Thecc1EG042118t3
ATGGGTAAGAAGATGCATGAAAAGGATGGGCATAAAAGGGTCAATAACCAGGTTGAAGAAGGCAATGCTGTTGAAAAGGAAAGTGATTTTTTGGATGTGTCAGCTGGGAATATGAATGATGTTTCCAAATTAATCAATAGAGATCATGATAAGAATAAGAGAAAACAGGATAACTGTGAAAAGAAGAAGGATCGGATGAAAAAGAGGAAATCAGAGTTTGATACAGATAAAAAGGAATCTCAGAAGGCTCCAAAGAAGCATAAGAAAAGTAAAGATGGAGTTGGTGAAGTTAAAGAGGCTTCAATGGAAATTTGTAGAGCTGGAAAAGAGAATATAAAAAACGAAAGTAGTAAGGCAATGTATTTGGGGAACAATTTTGAGTTGGAAGCAAAAAGGGCTTGGAAAGATAAACACAAGAACAAGATTAGAGATGGGATTGATGCAGTCACTACTGCAACTGAAACCCTTGAACATGGTAAAATGCAAGAGACAGTTGAGGTACTAAAAAGCTGCAGCACTGAAGACATTAACAAGATGGTGCATGGAAAAGAACGTGAATATGAGAAGCGAAAGAAGAAGAAACACAACTTGGAGAAGGTGACTGGTAATGTTGATGGTCATATTGCAGTAATGAGCAGCATAACTGATGGAAATGAAACTGACAAGAAGAAAGACCGAGAAGATGGGAATGTCATTAAAAAGGTTGAGGACTCTAGGAATGGGAAGAAGAGAAAGAAGAAAAGCATTAATTATGGTTTGGATGTTGATAAACCGAGGAAGACGAGCACTGGGATTGAAAATCATGAGTTTCTCTACAGCAATGTTGAGTTAAATGGTAATGCAGTAGAATGCAGAAAGTTAGGCATTGCTGTTGATAATGATGAAGATGGCAATAGGGACAAGAAGAAGAAGAAGAAGAAGAAATCCAAATCTCTGAAAACTGGTTCAGATGGTAAAGAGCATCAATCTTTTAAGGGATATAAAGATCGTGAGGTTGACAGCAATGATAAAGAGGATCCAGCTGACAATGAGGTAGAATGCACAGAATTAGGAGGTGGTGTTGATAATACTGAAGATGGTAACAGAGGCAGGAAGAAGAAATCTAAATCAGTGAAGAGTGATTCGGAGGGTAAACATCATAAAGGAGATGCAAGAACCAGAAAAAGTGTCAACACTACCAATCAATCTGAAGATGCTGCACCTAAAGATATATCTAAGAAAGTGAGTTTCTCTGATCATGTTGAGGTTTTCCCTTGTGCGGATGGTATAGTTGATGAAAACATGGATGGCAAAGAAGGCTTAGTGTATGGTAAGCGTTACTCAAAAGAAGAAGATGCTATCGTTATGGATGCTGTTGCCAATTACATTGAGTCTAATAATTTAGGTGAGGAGGGTCTAGATATGGTTCTGAACTGTAGAGCTTACCCCCAAGTCAGAAACTGTTGGAAGGAAATTCAAGCAGCCATTCCTTGGAGGCCATGTGATAGTGTGTACCGTCGAGCTCATGTTCTTTTCGAAAGGGATGAGAAGCGTCCATGGACCCCTGAAGAGTATGAATTGATCCAAAAGTTTGTTGAAAAACATGGACCGAGGTGGAAATTGTTGGCCGACACACTTGGCAAGCATAGGCACCATGTAAAAGATACATGGCGTAGAATAAAATTGACCAATGCAAAGAGAGGGAATTGGTCTCAAGAGGAGTACCAGAATTTATTTGACTTAGTAAACTTGGATTTATCTATGAAAGCTTTTGAGGAAAAGAAATCCAAGCATGGAATGTTGCGAGACAATATTTGTTGGAGTGCGATTAGTGACAAGATGGAAACAAGAGGTTTTGCACTTTGTTGCAAAAAATGGTATTACAGCTTAGCGTCTCCTATGGTAGCAGAAGGCATATGGGCTGATGCTGATGACTATCGCATGCTAGATGCTCTTTCTAGCTTGGATGCTTGCTGCATGGAAGATGTGGACTGGGACAACCTTATTGAGCATAGGTCTGGAGATTTATGTCGAAAACGGTGGAACCAAATGGTTCAACATATAGGTCCACATGGGGTCAAGTCTTTTGCTGAACAAGTTGAAGTTCTTGCTAATCGATATCGTCCAGATATGCTTGATGCAAGAGAGGCCTATGATAGCAAATGTCCTGTTGATCTGCCATAG
Protein Sequence:
- >Thecc1EG042118t3|Theobroma_cacao|MYB_related|Thecc1EG042118t3
MGKKMHEKDGHKRVNNQVEEGNAVEKESDFLDVSAGNMNDVSKLINRDHDKNKRKQDNCEKKKDRMKKRKSEFDTDKKESQKAPKKHKKSKDGVGEVKEASMEICRAGKENIKNESSKAMYLGNNFELEAKRAWKDKHKNKIRDGIDAVTTATETLEHGKMQETVEVLKSCSTEDINKMVHGKEREYEKRKKKKHNLEKVTGNVDGHIAVMSSITDGNETDKKKDREDGNVIKKVEDSRNGKKRKKKSINYGLDVDKPRKTSTGIENHEFLYSNVELNGNAVECRKLGIAVDNDEDGNRDKKKKKKKKSKSLKTGSDGKEHQSFKGYKDREVDSNDKEDPADNEVECTELGGGVDNTEDGNRGRKKKSKSVKSDSEGKHHKGDARTRKSVNTTNQSEDAAPKDISKKVSFSDHVEVFPCADGIVDENMDGKEGLVYGKRYSKEEDAIVMDAVANYIESNNLGEEGLDMVLNCRAYPQVRNCWKEIQAAIPWRPCDSVYRRAHVLFERDEKRPWTPEEYELIQKFVEKHGPRWKLLADTLGKHRHHVKDTWRRIKLTNAKRGNWSQEEYQNLFDLVNLDLSMKAFEEKKSKHGMLRDNICWSAISDKMETRGFALCCKKWYYSLASPMVAEGIWADADDYRMLDALSSLDACCMEDVDWDNLIEHRSGDLCRKRWNQMVQHIGPHGVKSFAEQVEVLANRYRPDMLDAREAYDSKCPVDLP*