Information report for Gh_A13G2022
Gene Details
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Functional Annotation
- Refseq: XP_016716237.1 — PREDICTED: transcription termination factor 1-like
- TrEMBL: A0A1U8LNU7 — A0A1U8LNU7_GOSHI; transcription termination factor 1-like
- STRING: Gorai.013G268300.1 — (Gossypium raimondii)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv6_147180_trfu.t1, Bv1_022230_yyxp.t1
- Capsicum annuum: CA00g94850
- Citrullus lanatus: Cla021275
- Citrus sinensis: orange1.1g014781m
- Fragaria vesca: mrna21456.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_10508_BGI-A2_v1.0
- Populus trichocarpa: Potri.015G095000.4, Potri.015G095000.2, Potri.015G095000.3, Potri.015G095000.1, Potri.003G168900.2, Potri.003G168900.1
Sequences
CDS Sequence:
- >Gh_A13G2022|Gossypium_hirsutum|MYB_related|Gh_A13G2022
ATGGGTAAGAAGATGCGTGAAAAGGATGGGCATAAGAGTGAGAACAAACAGACTGAAGAGGTTAACTCCATTGAAAAGGAAATTGATGTTTTGAATGGTGTTCCCAAATCAAGTAACAGAGATGATGACAAGAATAAGATAAAGGATCGAACAAAAAAGAGGAAAACAGAGTTTGATACAGATAAAAAGGAATCTAAGAACACTCATAAAAAGCATAAGACAAATAAAGATGCAGTTGAAGAGATTCCAATAGAAACTTGTTTGGGTGGAAAAGAGAATGCAGAACAAGAAAGTCGCAAGGTGATGAACTTGGAGAACAATGGGGAAGCAAAAAGGGTTAAGAAAGACAAACATAAGAAGAACAGGGACGAGACCGATGCAGTTGCTACTGTGACTGAAACCCTCAAACATAGTAAAAAGGAATCTGAGAAGGCTCATAAAAAGCACGAGAAAAGTAAAGATGAGGTTAAAGAGATTTCAGTAGAAAATTGTTTAGGTGGAAAAAAGAACACAGAACAAGAAAGTAGCAAGGCGATGAACTTGGAGAACAAAGGGGAAGCAAAAAGGGTCGGGAAAGATAAACACAAGAAGGACGACAAGGATGGGATTAATGCAGTTGGTACTGTGACCGGAACCCTTGAACATAGTAAAAAGGAATCTCCAAAGGCGCGTAAGAAAAAAAAAGATGTAGTTGAAGAGATTTCAATGGAAACTTGTTTAGGTGGAAAAGAGAATGCAGAAAAAGAAAGTAGCAAGGTGGTGAATTTGGGGAACAATGGGGAAGCAGAAAAGGTTGGGGAAGATAAACACAAGAGGAAGAATAAGGTTGGAATTGATGCAGTTGCGACTGTGACTGAAACCATTGAACATAGTAAAATGCAAGAGCCTGTTGAAACTGATGTGTGCAAGAAGCAGAAGAAGAAACAAAAGCTGGAGAAAGTGAATGGTAATGTTGCTGATGATATTGCAGCACCGAGCAGTACAACTGATAAAAAGGGTACTGGTAGAGAGAATTCATCTGGCAATGAGCTAGAACGCAAAAAGTTGCGAGATATTGGTGGTGATGATGAAGAAGGAAATAAACGCAAGAAGAAGAAATCAAAATCAGTGGAAAATGATACCGATCAGGTCGAAAATGCTACACTCAAAGATAACTCTAAGAAAGTGAGTTTCAGTGATCAGGTTGAGGTTTTTCCTTCTATGGATGATGCAAAGAAGGACAAACAAGGCTTAGTGAAAGGTAAGCGTTTCTCAAAAGAAGAAGATGAGATTGTTATGAACGCTGTTGCTGAATACATTGAGTCTCATAATCTAGGTGATGAAGGTTTAAACATGGTTCTAAACTGTGGATCTCACAAAGAAGTGAGAAGGTGTTGGAACGAAATTCAAGCAGCCATTCCTTGGAGGCCAGTTGAGAGCGTGTACAATCGAGCTCATGTTCTTTTCGAAAGGGACGAGAAGCGTCCATGGACTCCTGAAGAGTACGAGATAGTCAAGAAGTTTGTTGAACAACATGGACGCAATTGGAGATTGTTGGGTGATACACTTGGCAAGCATAGGCATCACGTAAAAGATACGTGGCGTAGAATAAGTGCCAATGCTAAGAAAGGTCAATGGTCTCAAGATGAGTACCAGAAATTGTTCGACTTAGTGAACTTGGATTTATGTATGAAAGCTACCCAAGAAAGAAAATCAAAGTATGGAATGTTGCGAGACAATATCTGTTGGACTGCAATTGGCAACAAGATGGAAACCAGGGCCTTTGTCTCGTGTTGCAGCAAATGGTATCGAAACTTAACGTCTCCTATGGTAGCAGAAGGCTTATGGGCAGATGTTGATGATTATCGCATGTTGGATGCTCTTTCTAGCTTGGATGCTTGTTGCATGGAAGATGTCAACTGGGACAATATTCTCGAGCACAGGTCTGGAGATTTATGTCGAAAACGGTGGAGCCAGATGGTTCAACGTTTAGGTTCAAACAAAAACTTGTCTTTTGCTGAACAAGTTGATATTCTTGCTGAACGGTATCGTCCAGACATGATTGAGGCAAGGGAGACCTTTGATAGCAAACAACCGGTTGATCTGCCTTAG
Protein Sequence:
- >Gh_A13G2022|Gossypium_hirsutum|MYB_related|Gh_A13G2022
MGKKMREKDGHKSENKQTEEVNSIEKEIDVLNGVPKSSNRDDDKNKIKDRTKKRKTEFDTDKKESKNTHKKHKTNKDAVEEIPIETCLGGKENAEQESRKVMNLENNGEAKRVKKDKHKKNRDETDAVATVTETLKHSKKESEKAHKKHEKSKDEVKEISVENCLGGKKNTEQESSKAMNLENKGEAKRVGKDKHKKDDKDGINAVGTVTGTLEHSKKESPKARKKKKDVVEEISMETCLGGKENAEKESSKVVNLGNNGEAEKVGEDKHKRKNKVGIDAVATVTETIEHSKMQEPVETDVCKKQKKKQKLEKVNGNVADDIAAPSSTTDKKGTGRENSSGNELERKKLRDIGGDDEEGNKRKKKKSKSVENDTDQVENATLKDNSKKVSFSDQVEVFPSMDDAKKDKQGLVKGKRFSKEEDEIVMNAVAEYIESHNLGDEGLNMVLNCGSHKEVRRCWNEIQAAIPWRPVESVYNRAHVLFERDEKRPWTPEEYEIVKKFVEQHGRNWRLLGDTLGKHRHHVKDTWRRISANAKKGQWSQDEYQKLFDLVNLDLCMKATQERKSKYGMLRDNICWTAIGNKMETRAFVSCCSKWYRNLTSPMVAEGLWADVDDYRMLDALSSLDACCMEDVNWDNILEHRSGDLCRKRWSQMVQRLGSNKNLSFAEQVDILAERYRPDMIEARETFDSKQPVDLP