Information report for DCAR_006074
Gene Details
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Functional Annotation
- Refseq: XP_017232756.1 — PREDICTED: uncharacterized protein LOC108206849 isoform X1
- TrEMBL: A0A161Y726 — A0A161Y726_DAUCS; Uncharacterized protein
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla005102
- Cucumis melo: MELO3C004928P1, MELO3C004928P3, MELO3C004928P2
- Cucumis sativus: Cucsa.131250.1, Cucsa.131250.5, Cucsa.131250.2
- Juglans regia: WALNUT_00008981-RA
- Manihot esculenta: Manes.11G148600.2.p, Manes.11G148600.1.p
- Prunus avium: Pav_sc0002474.1_g360.1.br
- Solanum lycopersicum: Solyc11g069850.1.1
- Solanum melongena: Sme2.5_01375.1_g00010.1
- Solanum tuberosum: PGSC0003DMP400014160, PGSC0003DMP400014159
- Vitis vinifera: GSVIVT01025226001
- Ziziphus jujuba: XP_015866617.1, XP_015866616.1, XP_015866618.1, XP_015866619.1
Sequences
CDS Sequence:
- >DCAR_006074|Daucus_carota|MYB_related|DCAR_006074
ATGTCAGGACCAGCATTTAAGAAAGTGTTGGAGAACAGGCAAGAAGAATGCAGTTCCGGGACTCTGGTGACTGCTCCAAACAGAATGGGAACTTTGAAGGAGAGCTCCGAAGTAATTGTCAGAGGGCTTCATCAAGTAAGTGGAGGTGGCTTTTACAATCTAGGCTCGGAAGATGAAGCAGTTGAACATCTACTAACCGAACTGGTACCTGAATACATTGATGCGGTTAGGAATGTCCTACAATTTGACGCATTTGGTCTGTATAATTGCTTTGGTTCTGGACCGTTACCACTACCTGACAATAGGCATCCAGAATCTGCTGCAGATAAACCGAATATCAGTAATATGCTGCATGAGAAGGCGACACAAAAACAAAAGACTACACAGCTTTCTATTGTGAAGTCAGAAGGCAACAGTGAAGGTCACCACACCATGTCTTCTACAACAAATGATCTTCCTGATACATATGAAGACTACCTCTTGGATGCTGAATACCTGGAGTGTGGTACTGACATGAACCCTGTCCCGAGCAGAGGACATTCCACAGAAAACTTACATTTAGATCAGCAGTGTAAAGATTCAAGTCTAAGCCACTGTAATGTCATGTATGAGGGATGGTGTACATCAAGCAAGTTAGTGTCCGAAGCTAATGAAAACTCATTTTCGCCTAACAAGATGACAGTTGATGAAAGGATATCAGTTTCATCAGAAGAGGATATGATTTTGACAAGTGCATCCAATCCTCTAACTGGAGTGTTTAATTTCAGAACTAAGCCAAGGAGTCGACACATGAGGAGGTACAGGCATACTAATTCTAACTATTTGAAAACATTTTCTGTGGAGGATACCTGTTTTTCGTCTAGTGTACCTGACATGAAAGAGAAGGTGATTGTGAATGTCGTCAGAGGGAAATATAAGCCAGCGCAGCAGAGATACACTAGTCGATCAATAGCTAAGAGTTCAAGATTTTCGAGTAGAACATGTGAATATTCTGCAGTTTCAAAGGATATGATTCGGCCTAAAAAATCTGTTAGACAATGTCCTCGAGAAGGATTAAGGCCAAGAGTGTTAATACATGGTTCAGGGAAGAAAAATTCTGAAGCTGCTTCGACTGGGGTGCTATCTGGTGTACCGCTTGAGCAAAGGTCGATGGAAAAGGGAAATGAGTTTGAAGATTCTGCAGATAGCGTATCGGCGGGCTCAGATGTGGACTTCAATATAGGACTGTGTTCTGTAGAATCTCAGGAGACCAGTTCTGAGGGAAGCTTTCTTTCAGCAGCTAAGACTCACAAGAGTAATAATAGTAAGAGACAGCGCCATATACCATGGTCTCATGAAGAGGTGCTACAGCTGGTTAATGGCGTTTCTAAACATGGAGTTGGAAAATGGACTGATATAAAGAAGGTGTCTTTTCCATTATCTCCACACCGCTCAGCGGTTGATCTCAAGGACAAATGGCGAAATCTTGTGAGAGCTAGCTGCAGATTTTCTGAGAGGAAGAAAAGGGTTGGAAAAGGAAAATATTGGGAGACGCAATATCTACCAGACGACATTCTGCATCGAGTTAAGGAGCTGTCATGTATATATCCATACCCCAGGGAGCGCAATTTCAAGGTTTCTCAGAATCCATCAGGCCCATGCAAACCCGCGGGCACACTCACTTGCGGGAAGAAAAAACGCACCACCTACACCACCTATAGCTGCTCCCCGCCAATCACCGCCTCCACGCCAGCTGTTCTGACGCTGAATGACTTCAGAAAAGGCGGTGACGGGGGAGCAGAGTCTAGCTGCGACAATAAGTTCCATGAAAATTGGGAACTTATTGTCGCATTATCGACCGGATGGTTCGATAATAGTTCGAGATGTTTCAAGAAAATCAGGATTAGGGCGAGTAATGGGAGGAGCGTGGAGGCGAAGGTGGTGGATGAGTGTGATTCTATGCATGGTTGCGACAAAGAGCATTCGTATCAACGACCGTGTGACAATAACATTGTGGATGGTTCGTCTGCGGTGTGGAATGCGTTAGGGCTCAACAAGGACTTGGGCAGGGTCAATATTAATTGGTCCATGGTTTAA
Protein Sequence:
- >DCAR_006074|Daucus_carota|MYB_related|DCAR_006074
MSGPAFKKVLENRQEECSSGTLVTAPNRMGTLKESSEVIVRGLHQVSGGGFYNLGSEDEAVEHLLTELVPEYIDAVRNVLQFDAFGLYNCFGSGPLPLPDNRHPESAADKPNISNMLHEKATQKQKTTQLSIVKSEGNSEGHHTMSSTTNDLPDTYEDYLLDAEYLECGTDMNPVPSRGHSTENLHLDQQCKDSSLSHCNVMYEGWCTSSKLVSEANENSFSPNKMTVDERISVSSEEDMILTSASNPLTGVFNFRTKPRSRHMRRYRHTNSNYLKTFSVEDTCFSSSVPDMKEKVIVNVVRGKYKPAQQRYTSRSIAKSSRFSSRTCEYSAVSKDMIRPKKSVRQCPREGLRPRVLIHGSGKKNSEAASTGVLSGVPLEQRSMEKGNEFEDSADSVSAGSDVDFNIGLCSVESQETSSEGSFLSAAKTHKSNNSKRQRHIPWSHEEVLQLVNGVSKHGVGKWTDIKKVSFPLSPHRSAVDLKDKWRNLVRASCRFSERKKRVGKGKYWETQYLPDDILHRVKELSCIYPYPRERNFKVSQNPSGPCKPAGTLTCGKKKRTTYTTYSCSPPITASTPAVLTLNDFRKGGDGGAESSCDNKFHENWELIVALSTGWFDNSSRCFKKIRIRASNGRSVEAKVVDECDSMHGCDKEHSYQRPCDNNIVDGSSAVWNALGLNKDLGRVNINWSMV*