Information report for GSVIVT01025226001
Gene Details
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Functional Annotation
- Refseq: XP_010651205.1 — PREDICTED: uncharacterized protein LOC100853565 isoform X3
- TrEMBL: F6GU26 — F6GU26_VITVI; Uncharacterized protein
- STRING: VIT_06s0004g02520.t01 — (Vitis vinifera)
- GO:0031627 — Biological Process — telomeric loop formation
- GO:0000783 — Cellular Component — nuclear telomere cap complex
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Juglans regia: WALNUT_00008981-RA
- Manihot esculenta: Manes.11G148600.2.p, Manes.11G148600.1.p
- Prunus mume: XP_008226089.1, XP_008226097.1, XP_008226083.1
- Prunus persica: Prupe.6G106200.17.p, Prupe.6G106200.16.p, Prupe.6G106200.25.p, Prupe.6G106200.24.p, Prupe.6G106200.23.p, Prupe.6G106200.20.p, Prupe.6G106200.1.p, Prupe.6G106200.14.p, Prupe.6G106200.5.p, Prupe.6G106200.21.p, Prupe.6G106200.2.p, Prupe.6G106200.3.p, Prupe.6G106200.22.p, Prupe.6G106200.15.p, Prupe.6G106200.8.p
- Ziziphus jujuba: XP_015866617.1, XP_015866616.1, XP_015866618.1, XP_015866619.1
Sequences
CDS Sequence:
- >GSVIVT01025226001|Vitis_vinifera|MYB_related|GSVIVT01025226001
ATGTTCTGTGGTGGTAATAGAACCTCAGCTGAGGGCAATGGATCCTTGTTTACTTACCCAGAGGATGAAGGCATTGGAGTGGAGTATTTACTAGCGGAACCTAAGTGTAACAATTTGGTTGATGATGTTTTAGGTTTTGAGACATTGAATCCTCAGAAATTCTTCAGTGTTGGAGATTTTTCACACGCTGTTGAGAATGACCAAAGAAAAATTGATGGTGATGCACAGGATTCTAATTTCACTCGAGAAGAAGAGCATGCAAGCCTAGAATTTCTTGATGGAATGCTGGAAGGAACTGAAGGAGTTCTTCAAGGGATGAATAAAGTACCATGTTCTTGTGAAGATTTTCTTTTGGATACCAAACTTGCTGATCCAGTTCCAAATTTGGAGCATGGTCCATGTGGAGGCTCCTCTTTTGGAAACTTGGGTTTGGAGAGCCCCTCTTCAAGTTTCAATGGAAGAGATTCTGGTGTTAAATATACTTATAATCAGAATTCTTCTTTGCATGACAACATGACAATTCATGGATTACATGAGGACTTTAAGAACATATTTGGAGGAGGAACATCAATTAAGGACAAGCAGTGGCTAAAACTCCATATTTCATTTGGTTTGCAGAACCTTGTAGAGTTGGACAACGGTTTGAACCTCTTGAAACAGGGTGTAACTTTCAATGAGAATGAAGCCAAATCAAACTTCTCATCTAGGAATGAGTTCTGCAGCAGTGCATTCATCTCCTTCTCAAGTGTGGTCAATGATAAAACAGTGTCAGGACGCCAACAAGTGAAAAATGATTCTTTGCAGACATTATCTTCTGATGATAACAGAGTTGGATTTTGTATTCTAGATTCAGGAGAAAAAGATTTGCTTGTTACACAAAAAAGATTGCGTAAGCCCACTCGGAGGTACATTGAAGAACCTTCAGAGCAGAAAGGAAAATATCATAGTAGAAAATGTGGAATTTCTTATAAAAGGTCGAGGGATAAATTTCCACATGTTGGATCTCATGAGCAGCATCGCCAAGCTGGATTTGGAGCATCATCATTGGATTGTCAACAGGAATTCTTTGAAGGAGCCTGTATCCAAGTACCATTTGGTCTTCCTGTACAGGAAGGGTGCTCAAAGAGAAATACATCAATTTTGGGGTGCCAGGAATCCGAGGATTGCAAGGACAGTGGAAGCTTGGTTCCAAATGAAATTTCTGAAATGGAGCCTTTTCCAGCTGAATCTCAAGATGATATGTCTGAAGACGATTGTATCACGATTATAAATACTCAAAAAGGTAGAAGTCGTAGAAAACACCATATGTTGTGGACACTTTCTGAGGTGATGAAGTTGATTGAAGGTGTTTCTCAGTATGGTGTTGGAAGGTGGACTGAAATAAAGCGGCTACTTTTTTCATCATCTACTCATCGCACATCTGTAGATCTTAAGGACAAATGGCGTAATCTTCTAAGAGCTAGCTGCACAAGGTTGCATAATAAGAGAGAGGTCGAGCAAGGACGCAAGCATGCATCCCACCAAATTCCGCAGTCTGTTCTGGGCCGTGTGAGAGAGCTGGCCCTCATTTATCCATACCCAAGAGGACGCAAGTCCAAGGATACGTGTACCCCTGTTGTGTCTCCCATCCCTTCCTCCACGGGTAAACTGGTTCCCATGTCGACTGCTGTAAAAGGTGCTAAACGTGTCACCTTCTCCGCAACCTCAACCGGAAAGGAGTCCTTCAGCCTCTTGTCCACCCACCTCCTCAATCTCCCATCTTTACCATCGGTATCGTCGATTGCTGCTCTTGCAGTGTCGATCACCGACGTTCGTCTGAATTCGCCGGTCGTTTTATCGAACTTGTATTTCAATGGCTCTTCGCCAGACAAGAGTTCCAGGATCACAACTCCGAACGCGTACACATCTGATTGCTGCGTCGCCACTCCGGTGGATTGGAATTCCGGCGACATGTATCCTCTGACACCTTCGAATTGCATCGCTCTGCTATTCCTGATTCTCGTCGGTTTCGCCGCACAATTGGGCCGTTCCAAAATGGCATATCTTGGCGTTGTGCAAACTTATGCTCAATCCAGTATTGTTGTGGATGTAATCGAGACCATCAGCGAGATCCGCGGCGATCTGCATTCTCGAAATCCAAGTCGACAACACAGTGAAGTCAGGGTTCCTCTGTGCAGGGTCTGTTTGATCTTTCCGTTCGTTCACTTTTTATCACCTGCTGACCAATGGATCTTAGTCTTGTGCAACTTTGCTTCTTCTAGCTTTTAG
Protein Sequence:
- >GSVIVT01025226001|Vitis_vinifera|MYB_related|GSVIVT01025226001
MFCGGNRTSAEGNGSLFTYPEDEGIGVEYLLAEPKCNNLVDDVLGFETLNPQKFFSVGDFSHAVENDQRKIDGDAQDSNFTREEEHASLEFLDGMLEGTEGVLQGMNKVPCSCEDFLLDTKLADPVPNLEHGPCGGSSFGNLGLESPSSSFNGRDSGVKYTYNQNSSLHDNMTIHGLHEDFKNIFGGGTSIKDKQWLKLHISFGLQNLVELDNGLNLLKQGVTFNENEAKSNFSSRNEFCSSAFISFSSVVNDKTVSGRQQVKNDSLQTLSSDDNRVGFCILDSGEKDLLVTQKRLRKPTRRYIEEPSEQKGKYHSRKCGISYKRSRDKFPHVGSHEQHRQAGFGASSLDCQQEFFEGACIQVPFGLPVQEGCSKRNTSILGCQESEDCKDSGSLVPNEISEMEPFPAESQDDMSEDDCITIINTQKGRSRRKHHMLWTLSEVMKLIEGVSQYGVGRWTEIKRLLFSSSTHRTSVDLKDKWRNLLRASCTRLHNKREVEQGRKHASHQIPQSVLGRVRELALIYPYPRGRKSKDTCTPVVSPIPSSTGKLVPMSTAVKGAKRVTFSATSTGKESFSLLSTHLLNLPSLPSVSSIAALAVSITDVRLNSPVVLSNLYFNGSSPDKSSRITTPNAYTSDCCVATPVDWNSGDMYPLTPSNCIALLFLILVGFAAQLGRSKMAYLGVVQTYAQSSIVVDVIETISEIRGDLHSRNPSRQHSEVRVPLCRVCLIFPFVHFLSPADQWILVLCNFASSSF*