Information report for Cc06_g16670
Gene Details
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Functional Annotation
- Refseq: XP_027173316.1 — uncharacterized protein LOC113772998 isoform X1
- Refseq: XP_027173317.1 — uncharacterized protein LOC113772998 isoform X1
- TrEMBL: A0A068UNF0 — A0A068UNF0_COFCA; Uncharacterized protein
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Capsicum annuum: CA10g19550
- Cicer arietinum: XP_012567479.1, XP_004516067.1
- Daucus carota: DCAR_020474, DCAR_009054
- Juglans regia: WALNUT_00021724-RA
- Manihot esculenta: Manes.09G026400.1.p
- Populus trichocarpa: Potri.016G053300.2, Potri.016G053300.1
- Ricinus communis: 27810.m000638
- Solanum tuberosum: PGSC0003DMP400041042, PGSC0003DMP400041041
- Ziziphus jujuba: XP_015899006.1
Sequences
CDS Sequence:
- >Cc06_g16670|Coffea_canephora|MYB_related|Cc06_g16670
ATGGCTTCCGAGATTCCTGTACCGTCAACCGTGGCTTGGAGTTGGGTTATTGAAGCGCTATCCAGATCCAAGCAAGCAGATACGTCCCTTTTAATAGATATAATTAAAAAGGCTCCAGAGGTTTCTGATGATGAACTGGGGAAGAATTGCAGAGAAGTCGTGTCGCTGAAAATCTTAGAGAGTTTGATTGTTAAGGGGAATCAAAACAAGAACAAGGATGCTGCTACAGTTGGTCAAAAACTTGAATTGGATCCGTCAAACAATTGTGAAGATGTTCTTCGACAAATATCAGAGATGTCTGCGATGGATCTCACTGCAGTTGCACCAGAGATGTTGAATGGGGATGTTCAGTCCTTTATTGTGCACAAAAGAGCTTCTTTACCCAAGCCTGCTTTGCAAAAGCTTAAGGATGCCATTCTTGAAGGCAGCCATTCTATTCTTTCATCCTTAAAGGAAAGAAGTGGATTAACAGTTACAACTCAGTGTAATGATGATATACCGGTAAATGGTGGCAACTCCAATGTCCTTGCACAGAGACTTGAAGATTGCAGCATAAATAACAAAGTCACTTTGCCATATGGAAACGCGGGTTCTCCCACTCATGATAACATGGATGACGAATCACAAGAAAACTTGCCTGATACAAATCTTTTACCTGCTAAGAGGAAAACAGCTGCTATGAGAAGTGAAATTGTGGAGATACAAACCGATGGGGACCAAACCACATTGGATGATTGTTGTACTTCCCATGTGCAAGCCACCAAGAAATTTAAGCAGAAAGCCAATTTCACTGATGACACTGTAGTCCAGAATGCAATAGCTCCAACCACCCATGGACCTTCAACAACTTTATCTGAAGGAGTTGTTAGATATATTGAAAAAGAAGGTTGTAATTCGAAAAAAGAAGTCCAATGTGGGTCTTCCACCCCTCAAAATGTGGATGATGATTTAGAAGGAAATTTTCCTGAGAGTAATTCATTACCAGCTAAGAGGAATAGGACAGCAATTGCTGCTGAAAATTCAGAAGGGAAAACCTTGAAAGACCAAATCCCATTAGGTGATGGTTGTGATATCCGTGGGGAAGTTGTTAAGAAGTTTAAGGAGGATGGGAATTCTATGATGGACGACATTGATGAGGATACTGTAGCTTCACCCGTGCATGGGCTAATGAAATTTTCATCTGAAGGAACTGTCAAACACATTGAAAAAGAAGGTTGCAATTTGGAAACAGAAGTTCAAGTTGGAGGCATTGAGTCAAATGGATCTCCTCATGGTGATGATGATCAGCATTATCAATTAAAAAGGATTGCACAGAGTAGTCATGCATTTCATCAAGATCATTCAGTTTGTGATCTGCAGGTTCCTCATGATGATGCTAAAGTGGCTGAATTGCATGCAGAGTTAGATGGCCAAAACAATAGTGTTGACGAAACCGATGGACACGATCAAGGTTTTGAGCTGCAGACAGAAAATGCTACATCTTTGGCCATGGGAGTAATGGAGAAAAATAATAGCCCAGAGAATCCTGTGCAGAAATTTGAGGGTAATTTTCAGCTAAGTTTCGGTGGTTCTGGATCCAAGGATGATATGCAGCACAATCCTGATTTTGATATGACTAGTGACAGTGATGACTATCGTGACGAGAGGATGGATATTGCCTTGAAAAAGGATGCTCTCTTGAGCTCTCAGTGCACATATAGTCAAGATTCCTTTGCAACACAGGCAAAGTATTGTGTGAAGTGTAACAAAGAAGGGCAATTACTGGTTTGTAGCTCCGACACCTGCCAGTTAGCAGTTCATTCCAGCTGCTTGCCTTCTGCTGCCCATTTTGATGGAAATGGAAAATTCTACTGCCCTTTTTGTGCATATTCTCGTGCAATCTCGGAGTACATGCAAGTTAAGAGGAAGGCCTCATTTGCAAGGAAAGACTTAGCTTCCTTTATTGGGGTGCAAACTGTATGTCAACAAAAGAAGGCCACCATGAAATTGGGGAGAGAAAGTCGAAATGAGTTGCAAAAGAATGAAGGTAATAACAGTGAAGACTTTGTGAACAAGGTTTCTGATTCTCACTGTGGGGTTAAAATGGGTAACAAGCATCAATCAGAGCCTCCATTGTCATGTTCTAGTGATCATTCTCATTCTGGAGAAAAGGTGGTGTCTCCAAGTGATGGAATGCCCAATACCTTGGTGAGCGGAAACTTGGAGCCACAGTGCCAATTGCTTGGAGTGCAAGTTGAGCAGCCAGTTGTTGCTCATCCTGTACATGGATCTGATGTTGATTGCAAAGAAGCTCACATGGCTGATAGGAATGAGGGGAATGCTGGAGCCGAAGGCAAGAAAGTTTCAGAAATTCCAGAGTCAGCTTTACCTCAGGAACCTGTCTGTGGACCAATTAGTGAAAGCTCTGAAGAAGACAATGAGAAATCTGTGAGAAGTTACTCCATAAGATTGCGAAGGCCCATCAAGAACTATACTTATCCAGCGATTCCTCAACTCAGGCGGAAAATTCTCCCATGGACAAAAGCAGAAGAAGAGAAGTTAAAGGAGGGGGTGCAGAGGCTTTCTAGTCCGCACGATCGAAGTATTCCATGGAAGCAGATTTTGGAATTTGGAGGTGATGTTTTCCAGAGAGGTCGCACCACAATCGACCTCAAGGATAAGTGGAGAAATATTTGTAAGGGAGGTCCAAGATGA
Protein Sequence:
- >Cc06_g16670|Coffea_canephora|MYB_related|Cc06_g16670
MASEIPVPSTVAWSWVIEALSRSKQADTSLLIDIIKKAPEVSDDELGKNCREVVSLKILESLIVKGNQNKNKDAATVGQKLELDPSNNCEDVLRQISEMSAMDLTAVAPEMLNGDVQSFIVHKRASLPKPALQKLKDAILEGSHSILSSLKERSGLTVTTQCNDDIPVNGGNSNVLAQRLEDCSINNKVTLPYGNAGSPTHDNMDDESQENLPDTNLLPAKRKTAAMRSEIVEIQTDGDQTTLDDCCTSHVQATKKFKQKANFTDDTVVQNAIAPTTHGPSTTLSEGVVRYIEKEGCNSKKEVQCGSSTPQNVDDDLEGNFPESNSLPAKRNRTAIAAENSEGKTLKDQIPLGDGCDIRGEVVKKFKEDGNSMMDDIDEDTVASPVHGLMKFSSEGTVKHIEKEGCNLETEVQVGGIESNGSPHGDDDQHYQLKRIAQSSHAFHQDHSVCDLQVPHDDAKVAELHAELDGQNNSVDETDGHDQGFELQTENATSLAMGVMEKNNSPENPVQKFEGNFQLSFGGSGSKDDMQHNPDFDMTSDSDDYRDERMDIALKKDALLSSQCTYSQDSFATQAKYCVKCNKEGQLLVCSSDTCQLAVHSSCLPSAAHFDGNGKFYCPFCAYSRAISEYMQVKRKASFARKDLASFIGVQTVCQQKKATMKLGRESRNELQKNEGNNSEDFVNKVSDSHCGVKMGNKHQSEPPLSCSSDHSHSGEKVVSPSDGMPNTLVSGNLEPQCQLLGVQVEQPVVAHPVHGSDVDCKEAHMADRNEGNAGAEGKKVSEIPESALPQEPVCGPISESSEEDNEKSVRSYSIRLRRPIKNYTYPAIPQLRRKILPWTKAEEEKLKEGVQRLSSPHDRSIPWKQILEFGGDVFQRGRTTIDLKDKWRNICKGGPR*