Information report for DCAR_009054
Gene Details
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Functional Annotation
- Refseq: XP_017238175.1 — PREDICTED: uncharacterized protein LOC108211162
- TrEMBL: A0A165ZQD9 — A0A165ZQD9_DAUCS; Uncharacterized protein
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn063461
- Cicer arietinum: XP_012567479.1, XP_004516067.1
- Citrus sinensis: orange1.1g003750m, orange1.1g005228m
- Gossypium hirsutum: Gh_A07G0807
- Populus trichocarpa: Potri.016G053300.1, Potri.016G053300.2
- Prunus mume: XP_008240866.2
- Ricinus communis: 30170.m014226
- Solanum tuberosum: PGSC0003DMP400041042, PGSC0003DMP400041041, PGSC0003DMP400041040
- Vitis vinifera: GSVIVT01033321001
- Ziziphus jujuba: XP_015899006.1, XP_015889182.1
Sequences
CDS Sequence:
- >DCAR_009054|Daucus_carota|MYB_related|DCAR_009054
ATGACGTCATCTCCAAATGCCTCTTCTTGGCTCCCCTGGATATGGGCACTCGAAACTCTCGCTTATAATCACGCAGATTCATCTCTTTTGATTGATTTAATGAAATTGATTCCGGATAATGTGGTGGATAATGGTGGGAATGTTGCAAAGGAATCGGCTTTTTTGAGAATTTTGGAGGGTTTTCCGGGTTCTCGAAAAGGGGAATGCTGTGGTGATTCTTTGAAATTGGATAGTAACGCTGGTGGTTTTGGTTCTTTGAAATTGTTGCGTAAGGAGTGTTCGGGGCGAAATCATGAGTTGAGTGAATCGGAGATGCTGAGGTTGGATGTCGACACGGGCTTGCCTAAATGCACTTTGAGAAAGCTGAAGGATATGATTTTGAAGGACAGCCATTTACTTCCTTCGTACTTGAAGGAAAGGAGTGGTTTGCTTAAATGTTCGGATGGTGTCACAAAGAGACTACCGGAAGGGAGCAACTGTGATGCTGCCGAGAATCCGAAGGTTAGGGACTTGTCTTCTGGGAAGAGGGGCATAAATGACTTGACTACTGCAAATGAAGGGATGGTATCTGCTTGCAGGGAATTGATTGTGTACAATGCTTATCCCGATGTTAAAGCTGCCACAAAACGTAAGTGGGATACCTTTTGTACCCAGCAGGTGATTGAAGGTAATGACTCGGCTTCTTTCCATGAAAATAGACATGTTGAGGATACTTCTGGAGGAATTGTCTTGTATAGTGGAAGAGATGGGTCAAATTTAGATAGCGAACCTTGGGCAAAATCCTTCCACGGTGACATGCCTTCTGAGAATGTTGATGATAATCATCGACGAGAAATTTTAAGTTCTGATGACATCGACCATGATGAAAATGATGACAGCATTGCAAGAGAGGATATACTTTTAGAAACTCAAAATTCAGATAGTCAAGATTCCTTGGCAAATGTTAATGGAACAAAGGAACAACTTTGTATGATGTGTAAGCTAGGTGATCAGCTGTTGGTTTGTAGTTCAGGGTCCTGCCAAAGAGTGGTCCATGAAAGATGCTTGGGGTTTGCACCCACTTTTGATGCAAAAAGGAGGTTTTACTGCCCCTTTTGTGCATATTTCCGAGCAGTTTCTGAGTACTCGGATAGCAAGAAGCAGTACGCCTTGACAAAGAATGCTCTGCTCTCATTTAAAAATCGCCTGAGAAACTCCGATATTTCAGGTAGGGGAGATCGGAATCATGTAAGAGACTCTGAGGTTTCAGATAAATGCACTGAACAAAACAACCTTGAGAATGTCGTGAGCAGAGTGAATCAAGTGCAATCTATGATGCGTATGAGGGAAAAGTCCTCAGTATCATGTGATTTAAGCAGCAGGGTAGGGGAAAGAGATGTGACTTGTGGAGGAAATATGGCTGACAAGCAAAATGCAGAAACGATTGGCAGTTCAGTGTACTGCCAATCCACAAAAGAGCAAGTGCAGAAGGTTCCGGAGCTAGATGTCCAAAACTGTAAAGCTTATAATTCATTGCATGGAGGGAGTAAACAACTTGCTGTAGTTGAAAAGCTTCAGAAAGTTTTACAGCAGCCAAATGGTGTGATCCTAGTTACGAATAATGAAGAACAAAAAATAGCATTAAGAGCTGTAAAGGATAGCAAAGTTCCCGATTCTGACAAATACTTGAAAATTTCCCACCGGAATGATCCACGCACTGGAGCTGATAGGGAGCAAGATGTTTCTAATCAACCCCATGTTTTACCTCGTGAACTTGCAAAGCCGCTGCGTTCCTTAGGTGTCCAGAAGCAAGAACAACACATTCCATACCCATCAGTCCCGCAGTACCGAAGAAAGAAAGTCCCATGGTCAGATGCCGAGGAAGAGGCACTAAAGGAAGGAGTAAGGAGATTTGCAAGTGATAACAATAGAACTATGCCGTGGAAGAGAATCTTAGAATTCGGAGCTCAAATTTTTGAGAAACATCGTACAGCTATAGACTTGAAAGATAAATGGCGGAATATGTGCAAAGCATCTCCAGTAGTATGA
Protein Sequence:
- >DCAR_009054|Daucus_carota|MYB_related|DCAR_009054
MTSSPNASSWLPWIWALETLAYNHADSSLLIDLMKLIPDNVVDNGGNVAKESAFLRILEGFPGSRKGECCGDSLKLDSNAGGFGSLKLLRKECSGRNHELSESEMLRLDVDTGLPKCTLRKLKDMILKDSHLLPSYLKERSGLLKCSDGVTKRLPEGSNCDAAENPKVRDLSSGKRGINDLTTANEGMVSACRELIVYNAYPDVKAATKRKWDTFCTQQVIEGNDSASFHENRHVEDTSGGIVLYSGRDGSNLDSEPWAKSFHGDMPSENVDDNHRREILSSDDIDHDENDDSIAREDILLETQNSDSQDSLANVNGTKEQLCMMCKLGDQLLVCSSGSCQRVVHERCLGFAPTFDAKRRFYCPFCAYFRAVSEYSDSKKQYALTKNALLSFKNRLRNSDISGRGDRNHVRDSEVSDKCTEQNNLENVVSRVNQVQSMMRMREKSSVSCDLSSRVGERDVTCGGNMADKQNAETIGSSVYCQSTKEQVQKVPELDVQNCKAYNSLHGGSKQLAVVEKLQKVLQQPNGVILVTNNEEQKIALRAVKDSKVPDSDKYLKISHRNDPRTGADREQDVSNQPHVLPRELAKPLRSLGVQKQEQHIPYPSVPQYRRKKVPWSDAEEEALKEGVRRFASDNNRTMPWKRILEFGAQIFEKHRTAIDLKDKWRNMCKASPVV*