Gene Details:
- Gene ID: CA03g33870
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Capsicum annuum
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_016563106.1 — PREDICTED: transcription factor DIVARICATA
- Swissprot: B8A9B2 — MYBS1_ORYSI; Transcription factor MYBS1
- Swissprot: Q8LH59 — MYBS1_ORYSJ; Transcription factor MYBS1
- TrEMBL: A0A1U8FVE8 — A0A1U8FVE8_CAPAN; Transcription factor DIVARICATA
- TrEMBL: A0A2G3A3A9 — A0A2G3A3A9_CAPAN; transcription factor DIVARICATA
- TrEMBL: A0A2G3D184 — A0A2G3D184_CAPCH; Transcription factor DIVARICATA
- STRING: PGSC0003DMT400014350 — (Solanum tuberosum)
Gene Ontology:
- GO:0009651 — Biological Process — response to salt stress
- GO:0009733 — Biological Process — response to auxin
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >CA03g33870|Capsicum_annuum|MYB_related|CA03g33870
ATGTCACCTTCAGATTGGAGCAGAGAAGAAGAAAAGGCTTTTGAAAATGCCATTGCTATGCACTGGGTTGAAAATTGTGAACAACAATGGGAGAAATTTGGTTTAATGGTCCCTACAAAAACCATTGATGAGCTGAAGCAACATTACCAGTTACTTGTTGATGATGTTACAGCAATTGAAGCAGGGCAAGTTCCAATACCGAATTACAAAGGAGAAGAAGCTTCTTCTTCTTCGACCAAAGAGGGAAATCTAGGGTATTCTGCAGGTTCAGTAGACCGCCGGTCTAATTGTGGTTATTCAAATGGATTTTCCGGGACGAATCATGACCCGATTGGCCATGGCGGAAAAGGGAATTCTAGGTCTGAACAAGAGAGACGAAAGGGGATTCCATGGACTGAAGAAGAACATAGGTTATTCTTGCTAGGTTTAGAGAAATTTGGGAAAGGAGATTGGAGAAGTATATCGAGGAATTTTGTGATATCGAGAACACCAACACAAGTAGCTAGTCATGCTCAGAAGTATTTTATACGTTTGAATTCCATGAATAGAGATAGACGAAGGTCGAGTATACATGACATTACAAGTATTAACAATGGAGACGTATCTACTCACCAAGCGCCAATTACAGGCCAACAAGTGAATACAAATCCATCAAATGCAGCAGCACTTGGACCATCTGTTAAGCACAGAACTCAGCCAAATATGCATGGTATGGGTATGTACGGTGCTCCCATGGGTCATCCCGTCGCAGCACCGTCGAGCCACATGGCGTCAGCTGTTGGAACTCCGGTTATGATGCCTCATGGACATCCTCCTTATGTACTTCCAGTTGCATATCCCATACCACCGCCACCACCACCCATGCACCAGTGA
Protein Sequence:
- >CA03g33870|Capsicum_annuum|MYB_related|CA03g33870
MSPSDWSREEEKAFENAIAMHWVENCEQQWEKFGLMVPTKTIDELKQHYQLLVDDVTAIEAGQVPIPNYKGEEASSSSTKEGNLGYSAGSVDRRSNCGYSNGFSGTNHDPIGHGGKGNSRSEQERRKGIPWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSINNGDVSTHQAPITGQQVNTNPSNAAALGPSVKHRTQPNMHGMGMYGAPMGHPVAAPSSHMASAVGTPVMMPHGHPPYVLPVAYPIPPPPPPMHQ*