Information report for Aan000862
Gene Details
Functional Annotation
- Refseq: XP_021983810.1 — transcription factor MYBS1
- Swissprot: B8A9B2 — MYBS1_ORYSI; Transcription factor MYBS1
- Swissprot: Q8LH59 — MYBS1_ORYSJ; Transcription factor MYBS1
- Swissprot: Q9FNN6 — SRM1_ARATH; Transcription factor SRM1
- TrEMBL: A0A251TYS3 — A0A251TYS3_HELAN; Putative duplicated homeodomain-like superfamily protein
- STRING: VIT_17s0000g04130.t01 — (Vitis vinifera)
- STRING: PGSC0003DMT400014350 — (Solanum tuberosum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Capsicum annuum: CA03g33870
- Citrullus lanatus: Cla018988
- Cucumis sativus: Cucsa.198920.1
- Daucus carota: DCAR_023184
- Glycine max: Glyma.17G121000.1.p
- Juglans regia: WALNUT_00013425-RA
- Manihot esculenta: Manes.05G139200.1.p
- Nicotiana benthamiana: Niben101Scf00725g03014.1, Niben101Scf02786g00005.1
- Nicotiana tabacum: XP_016434821.1, XP_016496187.1, XP_016506796.1
- Solanum lycopersicum: Solyc03g119740.2.1
- Solanum melongena: Sme2.5_03124.1_g00002.1
- Solanum tuberosum: PGSC0003DMP400009906
Sequences
CDS Sequence:
- >Aan000862|Artemisia_annua|MYB|gnl|UG|Aan#S41948127;gnl|UG|Aan#S41968173;PUT-183a-Artemisia_annua-140357
CTTTTCTTCACCTTATTCTACACACCCTTTTCTCTCTTCTTTCAAAACCATCATCCTAACATCTCTCTGGATACAAGCATTAAAGCAACAAGTACAAGAAGCATGTCATCATCAAAAGTATGGAGCAAAGAAGAGGATAAGGCCTTCGAGAATGCCATTGCTAACCATTGGACTGAGGATACCAAAGAGCAATGGGATACAATTGCTTCACTTGTACCCACCAAAACCATTCCAGAGTTGAAACAACACTATCAATTACTTGTTGAAGATGTCGATGACATTGAAGGTGGTATCATTCCATTACCCAAGTATCTTGGAGAGGAGTCATCTTCCTCTTCTACCAAAGATAACCATCATGGATCGAATTCAAATCGACGTTCTTCTTGTAATTACGCTAATGGGTTTTCGGGTTTTGGTCATGATTCCACTAGTCAAGGTAGCGGAAAAGCAAGTTCAAGGGCGGAGCAAGAACGTCGGAAAGGGATTCCGTGGACAGAAGAAGAGCATAGGTTGTTTTTGTTGGGGTTGGACAAGTTTGGTAAAGGAGATTGGAGAAGCATTTCAAGAAACTATGTGATTTCAAGAACACCTACACAGGTTGCTAGTCATGCCCAGAAATACTTCATACGATTGAACTCGATGAACAGGGATAGACGGCGAACCAGTATTCATGACATTACTAGTGTTAACAATGGCGATGTCTCTTCACACCAAATGCCAATCACGGGTCAGTCCGGCAGTACAAACCCACCTAATGGTACAACAGTTGGTGCACCTATGAAACATAGGCCCCATCAACCGAATATGCCTCCAGGAATGGGTATGTACGGTGCACCAATGGGCCACCCGGTTGCTGCAGTTCCAGGCCATATGCCGTCAGCAGTTGGAACTCCGGTGATGATGCCTCATAGTCATCATCCACCGTATGTTATGCCAGTGGCGTACCCAATGGCCCCACCACCAACGATGCATCAATAA
Protein Sequence:
- >Aan000862|Artemisia_annua|MYB|gnl|UG|Aan#S41948127;gnl|UG|Aan#S41968173;PUT-183a-Artemisia_annua-140357
LFFTLFYTPFSLFFQNHHPNISLDTSIKATSTRSMSSSKVWSKEEDKAFENAIANHWTEDTKEQWDTIASLVPTKTIPELKQHYQLLVEDVDDIEGGIIPLPKYLGEESSSSSTKDNHHGSNSNRRSSCNYANGFSGFGHDSTSQGSGKASSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNYVISRTPTQVASHAQKYFIRLNSMNRDRRRTSIHDITSVNNGDVSSHQMPITGQSGSTNPPNGTTVGAPMKHRPHQPNMPPGMGMYGAPMGHPVAAVPGHMPSAVGTPVMMPHSHHPPYVMPVAYPMAPPPTMHQ