Information report for MDP0000710259
Gene Details
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Functional Annotation
- Refseq: XP_008379902.3 — coumaroyl-CoA:anthocyanidin 3-O-glucoside-6’’-O-coumaroyltransferase 1-like
- TrEMBL: A0A498J2B0 — A0A498J2B0_MALDO; Uncharacterized protein
- STRING: XP_008379902.1 — (Malus domestica)
- GO:0003677 — Molecular Function — DNA binding
- GO:0016747 — Molecular Function — transferase activity, transferring acyl groups other than amino-acyl groups
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT4G21440.1
- Citrullus lanatus: Cla007719
- Citrus sinensis: orange1.1g035629m
- Cucumis melo: MELO3C018773P1
- Gossypium arboreum: Cotton_A_30240_BGI-A2_v1.0, Cotton_A_17954_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G1244, Gh_A03G1414, Gh_D02G1875
- Manihot esculenta: Manes.16G019700.1.p
- Populus trichocarpa: Potri.019G118200.1
- Prunus mume: XP_008230200.1, XP_008224927.1
- Prunus persica: Prupe.3G228500.1.p, Prupe.4G035100.1.p
- Pyrus bretschneideri: Pbr011268.1, Pbr018024.1
- Ziziphus jujuba: XP_015886861.1
Sequences
CDS Sequence:
- >MDP0000710259|Malus_domestica|MYB|MDP0000710259
ATGGCTTCCACACTTAAGGTCCTAGAGCAATGTCAGGTCTCTCCACCAAAAGATTCAGTTCCCACAACCTCTCTTCCCCTCACATTTTTGGACATACCTTGGCTTGTCTTGMTACAACCTGTCCAACGCCTCTACTTCTATGAATTCCCTCACCCATCTCACCATTTCACACAAACCCTCCTTCCATCAATCAAACACACTCTCTCCCTCACTCTCCAGAACTTCTTCCCGCTCTCTGGAAACCTCACTTGTCCCCCTCCTCCCTCCATGCCTTACATCCACTACGTCGCAAACATGTCTTCTGTCAAATTCACCATTACTGAGTCCGCTGCCAACTTCATCCATCTTATAGGCAACCACCCAAGACATGTCCAAGAGTTTGATCACCTTGTTCCCCATTTGCCGGATTTTARTAAYTTGGACTCCAATTCAAGTGACACAACCACATTTCTACTTCCTATTCTTGCATTACAAGCAACAATTTTCCCAAACTCTGGCTTATGCATTTCCATAGCATATCGCCACGTTGTGGATGGACGAACTGCTAATCATTTCATGAAATGTTGGGCTTCTGTTTACAAGTCTGGAGGAGACTTATCTTGTATACATGAATCACCTCCTATCTATGACAGAGATTTGATCAAAACCCCAAAAGATTATGAGCCCATTTTATTCAATCAATACATCGGGTTGAGATCGACATGGAAAAATCTTGACATGGCCAAGTCTTCTTCCATTTTCATAGACAACTTTCGCACAACATTTGTACTAGGAAGAGAAAATATTCAAAGCCTGAAACAACTTATCATGACCCAATGCAAGAATTGTAATGAGCCAACCCCAAAGCACTTGTCGAAATTTGTGGTCACATGTGGTTTTGTGTGGGTATGCTTGATGAAGGCCCTACATGCTAGTGAAACTGGGGTGACTTCAATGAAGGATGATGACCTCTTACGGTTAGGGTTTGCAGCCGATATACGAAGCCTCTTTCAGAATCCAGTGCCCATCACCTATTTCGGAAACTGCTTGTCAGCATGTTATGTGGCAGATAAAAAGAGAGAGATCATGGCGGAGTGTGGGATTGCTAAGGCGGTGAAGGCCTTGGAGGCTGCAATTTTTGAGCTGAAAAATCGAGATCTTGAAGGGTTAAAGAGGATGGTTCCATTTCGAGGGGAGTTGGTTGTAGCAGAAAGTAGTGTAGCAATTGCTGGATCGCCAAAGTTGGGAGTTTATGGGACTGATTTTGGATGGGGAAGAGCAAAGAAAGTGGAGGTCGTTCACTTTGTTGATTCAACCGTTTTTTCTCTTGCTGAGAGTAGAGATGAGGAGGATGGCATTGAGGTTGGTTTAGCTCTACCGAGGACTACAATGGATGCATTTACTTCTTTGTTTGAACAAGATAACAGCACCAGCTGCGCCACTAACAATATGGGTAGAGCACCTTGCTGTGATAAAAATGGACTCAAGAAAGGTCCATGGACAACCGAAGAAGATGCCATGCTCGTCAATTATATTCAGAAGCATGGACCTGGAAATTGGCGAAACCTTCCAAAGAATGCAGGACTGCAGAGATGCGGGAAGAGTTGCCGCCTTAGATGGACTAACTACCTGAGACCAGATATAAAGAGAGGAAGGTTCTCCTTTGAGGAAGAAGAGACTATAATCCAACTACACAGCATTCTTGGAAACAAATGGTCAGGTATTGCAGCTCGCTTGCCAGGAAGGACGGACAATGAAATCAAGAACTACTGGAACACTCACATCCGAAAAAGGCTCCTCCGAATGGGAATCGATCCAGTGACTCATGCTCCACGCATCGATCTTCTTGATCTGTCCTCAATTCTCAGCTCATATGTGTGCAACAATCCAGYTGCTGCACTTCTCAATTTATCGAACTTGTTGAATAGTACACAGCAGCAGCAACCACTTGTTAATCCAGAACTGTTGAGGCTAGCAACAAGTCTGCTATCGATCAAACAAGAAAACCCGGAATTGTGTCCCCAAAATTATTCTCCCCTTCAAAAACCAGATTTGCAGTTCTCAGGAACAAAATAA
Protein Sequence:
- >MDP0000710259|Malus_domestica|MYB|MDP0000710259
MASTLKVLEQCQVSPPKDSVPTTSLPLTFLDIPWLVLXQPVQRLYFYEFPHPSHHFTQTLLPSIKHTLSLTLQNFFPLSGNLTCPPPPSMPYIHYVANMSSVKFTITESAANFIHLIGNHPRHVQEFDHLVPHLPDFXNLDSNSSDTTTFLLPILALQATIFPNSGLCISIAYRHVVDGRTANHFMKCWASVYKSGGDLSCIHESPPIYDRDLIKTPKDYEPILFNQYIGLRSTWKNLDMAKSSSIFIDNFRTTFVLGRENIQSLKQLIMTQCKNCNEPTPKHLSKFVVTCGFVWVCLMKALHASETGVTSMKDDDLLRLGFAADIRSLFQNPVPITYFGNCLSACYVADKKREIMAECGIAKAVKALEAAIFELKNRDLEGLKRMVPFRGELVVAESSVAIAGSPKLGVYGTDFGWGRAKKVEVVHFVDSTVFSLAESRDEEDGIEVGLALPRTTMDAFTSLFEQDNSTSCATNNMGRAPCCDKNGLKKGPWTTEEDAMLVNYIQKHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSGIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRIDLLDLSSILSSYVCNNPXAALLNLSNLLNSTQQQQPLVNPELLRLATSLLSIKQENPELCPQNYSPLQKPDLQFSGTK*