Information report for 28650.m000186
Gene Details
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Functional Annotation
- Refseq: XP_025015638.1 — LOW QUALITY PROTEIN: scarecrow-like protein 33
- TrEMBL: B9T679 — B9T679_RICCO; Chitin-inducible gibberellin-responsive protein, putative
- STRING: XP_002533748.1 — (Ricinus communis)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Citrus sinensis: orange1.1g045051m
- Gossypium arboreum: Cotton_A_06965_BGI-A2_v1.0, Cotton_A_30653_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A03G0366, Gh_A05G0801, Gh_D03G1188
- Juglans regia: WALNUT_00017266-RA
- Manihot esculenta: Manes.02G130800.1.p, Manes.02G130900.1.p
- Populus trichocarpa: Potri.001G242100.1, Potri.009G033300.1
- Prunus mume: XP_008222411.1
- Prunus persica: Prupe.6G073300.1.p
- Ziziphus jujuba: XP_015874024.1
Sequences
CDS Sequence:
- >28650.m000186|Ricinus_communis|GRAS|28650.m000186
ATGGATGATGCTCTACTCCGAGCACCTCCAGGGGCCATGTCCGGATTCAGATTTGAATATGGCACTATGTCAGTCCTTCCAAATCAGCATCTTGTTAATGGTTTCAAACTGAATCACAGCTCTGTTGTAGATCCTTATCGATCTCTGCATCCAAAAAATGCACATGCGTTAAGTAGTGACTCAGCGACCTCTACAAGCTCAAGCTTCGAACTAGACTCGCCTGATAATAGTGATATCTCCAATGTTGTTCTCAAATACATTAGTGATATGCTAATGGAAGAAGAATTAGAGAGTAAGAACTTTATGTTTGAGGACTGCTTAGCACTGCAAGCTGCTGAGAAATCCTTCTATGATGTTCTTGGCCAGAAATATCCCGCTTCTTTGGATCAATCACCTTTCCTTGATCAAAACATTCACAGCCTAGAGGGTACAAGCACTTGGTGTGGATGTGGAAGCCACCTCGAAAATGCTATCCAGGTACCAGATTTATATTGTAGGTCATTCTCTAATGATGATTCTTTGCTTCTATCAGAGTCTCAAACGAAGGATTATGCAAGAGGTTGTTGCTCTTTTAGTAGTTCAAGGGATAGGAAACATCATCAGCGGGAGGAAAGTGCCTGTGTAGAAGGGAGAAGCAACAAGCATTCTGCATTTTCTGTTGAACAGCCCGAGGATACGAAGATATTCGATGAGGTGCTGCTGTGTCAAGCAAGAAACAACGACTCTGCATCTTGTGTTCCTCAAAATGCATTACAAGGTGGTGGCGATGGACAGGAGAAGAATCATGGACGGACAGAAGGGTCAAACCGTAGAACAGCTCGAACAAAGAAACGTGGTAGCAATAAAAGGGACATGATGGATCTTTGGACTGTCTTACCTCAGTGTGCACAAGCTGTGGCTAATGATGACCAAACGACTGCAAAGGAGCTGCTAAGACAGATAAAGCAATATTCTTCCCCTTTTGGCGATGGAAACCAAAGATTAGCACATTTCTTCGCCAATGGGTTGGAGGCAAGGTTAGCTGGCACTGGAACACCCGGATATGCACCCGCTGTAAATAGTACAACATCAGCTGCTGGTATGCTAAAAGCTTACCATGCATATACTACAGCATGCCCTTTCCAGACAATGTCACATCTTTATGCTAACGAAACTATCATGAAACTAGCAGAGAAAACAACAAGGCTTCACATCATTGATTTTGGAATTCTTTATGGTTTTCAATGGCCTTGCCTGATTGAGGATCTGTCAACAAGACATGGTGGACCTCCCAGGTTGCATATTACAGGAATTGAGTTTCCTCAACCAGGTTTCCGACCTGCAGAAAGGGTTGAAGAAACAGGCCGTCGCTTAAGCAAGTATTGTGAGAGATTTAATGTTCCATTTGAATATGATTCCATAGCACAGAACTGGGAAAGTATACAATATGAGGATTTCAAGATAGATAGAAATGAGATGATTGTCGTTAATTGTTTGTATCGCTTAAAGAACATTCCTGATGACACAATGGTGGTGAACAGCATGAGAGACAGTATTCTAAAACTGATGAGGAGAATCAACCCGGATATCTTCATCCATGGAGTAGTTAATGGTACTTACAATGCACCTTTCTTCCTCACACGCTTTCGAGACGCCCTGTTTCACTTCTCAGCACTGTTCGACATGATCGATTCAACCATTCCCCGCGAGGAACCTGAAAGAATGATGTTTGAGAAAGAAGTATTTGGAAGGTATGCAGTGAATGTGATTGCTTGTGAGGGTGGGGAGAGGGTTGAAAGGCCAGAGACTTATAGACAGTGGCAAGCTCGAAACATAAGGGCTGGGTTTAGGCAGCTTCCATTAGATCAGGAGATCATGAAGAAGGTGATAACTACTGTCAAATCAAATTACAATAAGAACTTCATTGTTGATGAAGATAGTCAGTGGATGTTACAAGGGTGGAAAGGGAGAATTATTTATGCGCTTGCAGTTTGGAAACCTGTTCATGATTAA
Protein Sequence:
- >28650.m000186|Ricinus_communis|GRAS|28650.m000186
MDDALLRAPPGAMSGFRFEYGTMSVLPNQHLVNGFKLNHSSVVDPYRSLHPKNAHALSSDSATSTSSSFELDSPDNSDISNVVLKYISDMLMEEELESKNFMFEDCLALQAAEKSFYDVLGQKYPASLDQSPFLDQNIHSLEGTSTWCGCGSHLENAIQVPDLYCRSFSNDDSLLLSESQTKDYARGCCSFSSSRDRKHHQREESACVEGRSNKHSAFSVEQPEDTKIFDEVLLCQARNNDSASCVPQNALQGGGDGQEKNHGRTEGSNRRTARTKKRGSNKRDMMDLWTVLPQCAQAVANDDQTTAKELLRQIKQYSSPFGDGNQRLAHFFANGLEARLAGTGTPGYAPAVNSTTSAAGMLKAYHAYTTACPFQTMSHLYANETIMKLAEKTTRLHIIDFGILYGFQWPCLIEDLSTRHGGPPRLHITGIEFPQPGFRPAERVEETGRRLSKYCERFNVPFEYDSIAQNWESIQYEDFKIDRNEMIVVNCLYRLKNIPDDTMVVNSMRDSILKLMRRINPDIFIHGVVNGTYNAPFFLTRFRDALFHFSALFDMIDSTIPREEPERMMFEKEVFGRYAVNVIACEGGERVERPETYRQWQARNIRAGFRQLPLDQEIMKKVITTVKSNYNKNFIVDEDSQWMLQGWKGRIIYALAVWKPVHD