Information report for Gh_D03G1188
Gene Details
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Functional Annotation
- Refseq: XP_016740415.1 — PREDICTED: scarecrow-like protein 30
- Swissprot: P0C883 — SCL33_ARATH; Scarecrow-like protein 33
- TrEMBL: A0A1U8NNI7 — A0A1U8NNI7_GOSHI; scarecrow-like protein 30
- STRING: Gorai.003G130400.1 — (Gossypium raimondii)
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Citrus sinensis: orange1.1g045051m
- Gossypium arboreum: Cotton_A_30653_BGI-A2_v1.0, Cotton_A_21420_BGI-A2_v1.0, Cotton_A_06965_BGI-A2_v1.0
- Juglans regia: WALNUT_00017266-RA
- Manihot esculenta: Manes.02G130900.1.p
- Populus trichocarpa: Potri.009G033300.1, Potri.001G242100.1
- Prunus persica: Prupe.I004400.1.p, Prupe.6G073800.1.p
- Ricinus communis: 28650.m000187
Sequences
CDS Sequence:
- >Gh_D03G1188|Gossypium_hirsutum|GRAS|Gh_D03G1188
ATGGATACTACCCTTTTCCAAGATTTTCCCAGTTCCATGTATGGGTTCAAACTCGATCATGGAGCAGTACCAGTATATTCAATTCACGACTTCGTCAGTAATAATAATGGGTTTATTAAAGATAGTCCTCCACAGGTTGTTCCGAGTCCAGACTCACCTGTTGAGTCAGGGACAACAACGAATTCAGAGGCACATCCCCTTGACAGCATCCCTTTTGCCAATGAGATGCTCAAGTACATAAATGAGATGTTAATGGAAGAAGACATGGAAGAAAAGACCTGTATGTTGCAGGATTGCTTAGCTCTCCAAGCCGCTGAAAAATCATTCTATGAAGTCCTTGGCCATGAATATCCACTTTCAACGGATCCCATCCCTGCATATACAGATCAAAATGGTGGTAGTCCAGGTGATTTCAACTCCTCTTTGATCCAAACATCTCTTGTTGATACTCTTGAAAGGACCTCTTTGTTCCCAGATTTACAAAGAGGGATCCCCCCATCAATAGAGCCTTCTGGCAGCAGCTTATTAGGGTCAAAGGGAAGGAAAAATTATGAACGAGGAGATGTTGATGACTTGGAACAAGGTAGGAGCAACAAGCAATTTGCTGTTTCCCTTGAAGATTCAGAGCAAACAGATATGTTTGATGATGTACTGCTTTGCAAAGGTGAAAACGAGGATGATCCAAGGTGTTCTCTTAATAAGAGTTCGCAACATGTTTGGCCGCAGAAAGGGACATCCAAAGGTGGAACAGCACGCAGGAAGAACGGCAAGAAAAGTGAGGTGGTCGATCTGTGGAGTCTCCTCACTCAATGTGCACAAGCTGTCGCCATTAATGACCAAAGGACCGCAAATGAGCTGTTGAAACAAATAAGTCAAAACTCTTCTACAACTGGAGACGGAACCCAAAGATTTGCTCATTACTTTGCAGATGCACTTACGACACGTTTGGCTGGGATGGGGGCACCATCGTATTCACCATTGGTAAGCAATAGGACGTCAGCTGCTGATATCTTAAAAGCTTACAGAGTTCTTGTTTTAGCTTGCCCTTTTAAGAAAATGATGCATTTCTACGCGAATAAGAAGATAATGAAGGTTGCAGAAAAGGCAACCACACTCCACATCGTTGATTTTGGCATTTGTTATGGTTTTCAATGGCCTTGCCTCATACAGCGTCTCTCAGCAAGAGCTGGTGGACCTCCCAAGCTTCGTATTACCGGCATCGAGTTCCCACAACCGGGATTCCGACCAGCTGAAAGGGTTGAAGAGACCGGACGTCGCTTGAAAAGATATTGTGAGAGATTCAAAGTCCCATTTGAGTACAATGTGATAGCAAAGAAATGGGAAACCATCCAACTGGAAGAACTAAAGATCAAGAAAGATGAAGTTGTCATCGTGAACTGCATGTATCGGCTAAAGAACCTCCCCGATGACACACTGTCACCAACCAGTGCGAGGGACATTGTTCTGAAACTGATCAGAAGCATCAACCCAGAGTTTTTCATCCATGGGATTTCAAATGGGACTTATAATGCTCCCTTCTTTGTCACAAGGTTCCGGGAGGCACTCTTCCATTTCTCAGCTATTTTTGATATATTTGAGGCAAATGTGCCTCGGGATGATCCACAAAGGATGATGTTTGAGAGGGAAATACTTGGGAGGGACATAATGAATGTTGTTGCATGTGAGGGAATCGAGAGGGTTGAAAGGCCAGAGACATACAAGCAATGGCAGGCTAGGACACTGAGGGCAGGGTTCAAGCAGATTCCATTGGATCAGGAGCTTGTGAAGAAAGTGACAAATATGGTCCAATCCAATTATCATAGGGATTTTATCATAGATGTGGATGGCCGCTGGATGCTGCAGGGATGGAAGGGGAGAGTTATTTTTGCCCTTTCATGTTGGAAACCTATGAAGAATTAA
Protein Sequence:
- >Gh_D03G1188|Gossypium_hirsutum|GRAS|Gh_D03G1188
MDTTLFQDFPSSMYGFKLDHGAVPVYSIHDFVSNNNGFIKDSPPQVVPSPDSPVESGTTTNSEAHPLDSIPFANEMLKYINEMLMEEDMEEKTCMLQDCLALQAAEKSFYEVLGHEYPLSTDPIPAYTDQNGGSPGDFNSSLIQTSLVDTLERTSLFPDLQRGIPPSIEPSGSSLLGSKGRKNYERGDVDDLEQGRSNKQFAVSLEDSEQTDMFDDVLLCKGENEDDPRCSLNKSSQHVWPQKGTSKGGTARRKNGKKSEVVDLWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFAHYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSPTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWKPMKN