Information report for MDP0000566760
Gene Details
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Functional Annotation
- Refseq: XP_008368588.2 — GATA transcription factor 1
- Refseq: XP_028952110.1 — GATA transcription factor 1
- Refseq: XP_028952111.1 — GATA transcription factor 1
- TrEMBL: A0A498HKU4 — A0A498HKU4_MALDO; Uncharacterized protein
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Arachis hypogaea: Ahy017995
- Cajanus cajan: C.cajan_42913
- Daucus carota: DCAR_018802, DCAR_015528, DCAR_018802
- Glycine max: Glyma.10G126900.3.p, Glyma.10G126900.2.p, Glyma.10G126900.1.p
- Gossypium arboreum: Cotton_A_35951_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G0518
- Hordeum vulgare: MLOC_71376.4, MLOC_71376.3, MLOC_71376.2, MLOC_71376.1
- Manihot esculenta: Manes.03G154500.4.p, Manes.03G154500.1.p
- Medicago truncatula: Medtr5g007600.1
- Pyrus bretschneideri: Pbr006031.1, Pbr006028.1
- Vitis vinifera: GSVIVT01025199001
Sequences
CDS Sequence:
- >MDP0000566760|Malus_domestica|GATA|MDP0000566760
ATGGAGTCGCTGGAATCCTTCGACGAGTTACTCGACTTCCCCTCAGACGTCGGCGAAGAAGACAAAGACGAAGACTTTGAAGCCTCCAATGCGCTGCCTGGTGATGATCCTAGCTGTCAATTTTCTGAAACCGAGGAGTGTTCAGAGGAAGTGCTAGAATGGTTGTCGAACAAAGACGCTTTCCCTCCTGTCGAGACATTCTTCGGCATTGACCTCAGCTTCGCAGGAATTCCGTGGGAAGGGGAGCAGCTTTCTACGAACCAATCTGATAACTCCGGCAAGGATGACATGACTAAAGCGGAAACACCAATGATGGCGAAGACGGTTGGGAGACAATGTCACCATTGTGGGACTCGAAAGACCTCGCGGTGGCAGGCTGGTCCCCTTGGACCGAAAACCCTGTGTAATGCTTGTTGGTGTTGGTACAAGTCCGTGATGATTGGGGGAAAATGCCAGCATTGCGGGACTCTGAACACCCCRCAATGGCGGCGGGTTGGAAGGGATACTCTTTGTAATGCTTGTGCGATCAAGCTTAAGCACAGGTCTGAGATTCTTCGGAGAAAATGCCAGGATTGCGAGACTAAAAARAGTACCCCGCAATGGCGGGAAGACTGTCCCAAGGGAAAGAAAGCCTTGTGTGATGCTTGTTATGTTAGGTACAAGTCCGACATTATTGGGAGGAAATGCCAGCGTTGTGGGGTAGGAAAAACCAAGCCGTGGCAGAATTGGGGAGAAGGTCCCCTCGGAAAGAATACACTCTGTCGAGATCAATGGGAGAAAATGCCAGCATGCGGGACTGGAAACTCCCTGCGATGGCGCGCAGGTCCCCTTGGAACGAACACCCTGTGTGACAACTGTGGGTTGAGGTACAAGTCCGGAAGGCTTTTCCATGAATACCGCCCTGCAAGTTTAACAAGTTTCGCGAGCAAGTTGCAGCCGAAACCACCAAGGAAGAAGAAGAARATACAAAATATTGAGACGGGGATTGGTGGTGAAGCCGAGATAAGAGTGAGGAAGTGCCAGCAATGCGAGACTGAAGCCAMCCCGAAATGGAGGTCAGGTCCCMTTGGATTGRAAACWCTGTGTAATGCTTGTTGGCATAGGTATGAGATATCCAAAAAGCTTGTCACGCAATGCTGCCCTGCAAGTAGCCACACTTTCTCGAAAAAGTTGCGTTCAAACAGGCACAGGAAGCTATCGAATGTGCTGAGGAAAAAGCAAGAGATGGAGACTGGTGATTTCCCTGCAAGTAGCCCAACTTTCCCCAAAAAGTTGCGTTCAAACAGGCACCAGAAGCTATCGGATATACTGRGGAAAAAGCAAGAGATGGAGATAAGCGTTGAAGCGATAGCACTATTGGGCCTTCCCTGCGCGTACACGCGCTGCAAAAGAACCCAGCGCAGCACGCGCTGCAAAAGAACCCAGCGCAGCACGCGCTGCACGCTTCCACCAGCGGCAAAGTTTCACGTGGGTCTCATCTTTGTCGGCCACTATGATGCTCCCCCGTTGCCCTTGAATGTGATTAAACTATTTCAACGGCTCTTTTCTTGGATGGGTGGTGGAGATGAACTGGCCGTTGGTTAA
Protein Sequence:
- >MDP0000566760|Malus_domestica|GATA|MDP0000566760
MESLESFDELLDFPSDVGEEDKDEDFEASNALPGDDPSCQFSETEECSEEVLEWLSNKDAFPPVETFFGIDLSFAGIPWEGEQLSTNQSDNSGKDDMTKAETPMMAKTVGRQCHHCGTRKTSRWQAGPLGPKTLCNACWCWYKSVMIGGKCQHCGTLNTPQWRRVGRDTLCNACAIKLKHRSEILRRKCQDCETKKSTPQWREDCPKGKKALCDACYVRYKSDIIGRKCQRCGVGKTKPWQNWGEGPLGKNTLCRDQWEKMPACGTGNSLRWRAGPLGTNTLCDNCGLRYKSGRLFHEYRPASLTSFASKLQPKPPRKKKKIQNIETGIGGEAEIRVRKCQQCETEAXPKWRSGPXGLXTLCNACWHRYEISKKLVTQCCPASSHTFSKKLRSNRHRKLSNVLRKKQEMETGDFPASSPTFPKKLRSNRHQKLSDILXKKQEMEISVEAIALLGLPCAYTRCKRTQRSTRCKRTQRSTRCTLPPAAKFHVGLIFVGHYDAPPLPLNVIKLFQRLFSWMGGGDELAVG*