Information report for GSVIVT01025199001
Gene Details
|
|
Functional Annotation
- Refseq: XP_010651174.1 — PREDICTED: GATA transcription factor 8
- Refseq: XP_010651175.1 — PREDICTED: GATA transcription factor 8
- TrEMBL: F6GU15 — F6GU15_VITVI; Uncharacterized protein
- STRING: VIT_06s0004g02740.t01 — (Vitis vinifera)
- GO:0030154 — Biological Process — cell differentiation
- GO:0045944 — Biological Process — positive regulation of transcription from RNA polymerase II promoter
- GO:0005634 — Cellular Component — nucleus
- GO:0005667 — Cellular Component — transcription factor complex
- GO:0000977 — Molecular Function — RNA polymerase II regulatory region sequence-specific DNA binding
- GO:0001085 — Molecular Function — RNA polymerase II transcription factor binding
- GO:0001228 — Molecular Function — transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
- GO:0003682 — Molecular Function — chromatin binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_21534
- Juglans regia: WALNUT_00004884-RA
- Medicago truncatula: Medtr5g007600.1, Medtr2g094600.1
- Nicotiana benthamiana: Niben101Scf03614g00004.1, Niben101Scf04130g00007.1
- Nicotiana tabacum: XP_016514725.1, XP_016514726.1, XP_016465978.1, XP_016465977.1
- Petunia inflata: Peinf101Scf02234g00030.1
- Solanum melongena: Sme2.5_08483.1_g00001.1
- Ziziphus jujuba: XP_015877217.1
Sequences
CDS Sequence:
- >GSVIVT01025199001|Vitis_vinifera|GATA|GSVIVT01025199001
ATGATTGACTCTGGGCTTTTTGATGAGAATGGCAATGGCAATGACCATAGCTCAGATGATATGTTTGATGGCATCATTGATATTTTTGATTTCCCCATGGAAGATGTGGACATTGGTGGAGAGGTAGAGGAGCTGCAACGTGAATCATCACCTTTGAATGATTTATTGGCCCTTCCCTGTCCTTTCTCGGGCAATTCTTGCAATGACACTTCAAACCTTCGAACAATTCCATCTGATGAAGCTCCTCGGACAGAGCCAATCGTCATAGATACTTGTAGTGGAAATATTTCCCTCCATGGGGATTCTTCTGATGACAAAGAATCACTGCTGCTGCAAAACTCTACAACCTCTGAATCCGGAAAATCTGCCTCTGAACCATTTGCCCAAACCATTGAAGCTTCAGAAGGCTATCCCAACTTCATGAAAGGAAAGCAGAAGAAGAAAAAGAGAAAGAAGCTATCACTGCTATCAGGCGCTATGGGGGTAAAGAAACAGTGGTGGCAGCAGCCGATTACAATTGGGAGATGCATGCACTGTAATGTAACAAGGACCCCACAATGGAGGGAAGGACCAAATGGGCCCAAGACTCTTTGCAATGCATGTGGAGTTTGCTACAAGCGTGGCAGCCTCTTTCCAGAGTACCGTCCTGCATCCAGCCCTACTTTTGTTCCATCTTTGCACACAAACTCCCGCAGAAAAGTTACCGAGATGAGACACAAAGCTGTTAGTCCCATCCCTGTTGCAACTTTGCCCTCACCCCACAGGAAGGTGATTAAGATGAGAAGTAATGGTGGGCAGGAGGCTGCTATGGCCACAACTCCTACCTTTGTTGCATCATTACACTCAAACTCCCACAAAAAATGTTCCTTCCAGCAGCCAGTTACTGTTAGAAAATGCATGCATTGTGAGGCAGCACAGACCCCTTTATGGAGGCAAGGACCATGGGGACCCAAGAGCCTCTGCAACGCATGTGGGATTCGATACAAGTCTGGCCGTCTCTTCCCAGAGTACCATCCTGCTGCCAGTCCTACCTTTGTTGCATCTTTGCACTCAAACTCCCACAAGAAAGTCTTAGAGATGAGAAACCAGGCTACCCAACAACAGCTTTCTTTGGCTGCAACAGATACGGCAATGTCCCACCCCTCACAACTCATTCCATGA
Protein Sequence:
- >GSVIVT01025199001|Vitis_vinifera|GATA|GSVIVT01025199001
MIDSGLFDENGNGNDHSSDDMFDGIIDIFDFPMEDVDIGGEVEELQRESSPLNDLLALPCPFSGNSCNDTSNLRTIPSDEAPRTEPIVIDTCSGNISLHGDSSDDKESLLLQNSTTSESGKSASEPFAQTIEASEGYPNFMKGKQKKKKRKKLSLLSGAMGVKKQWWQQPITIGRCMHCNVTRTPQWREGPNGPKTLCNACGVCYKRGSLFPEYRPASSPTFVPSLHTNSRRKVTEMRHKAVSPIPVATLPSPHRKVIKMRSNGGQEAAMATTPTFVASLHSNSHKKCSFQQPVTVRKCMHCEAAQTPLWRQGPWGPKSLCNACGIRYKSGRLFPEYHPAASPTFVASLHSNSHKKVLEMRNQATQQQLSLAATDTAMSHPSQLIP*