Information report for XP_009785120.1
Gene Details
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Functional Annotation
- Refseq: XP_009785120.1 — PREDICTED: uncharacterized protein LOC104233422 isoform X1
- Refseq: XP_009785121.1 — PREDICTED: uncharacterized protein LOC104233422 isoform X1
- TrEMBL: A0A1U7XF89 — A0A1U7XF89_NICSY; uncharacterized protein LOC104233422 isoform X1
- STRING: XP_009785120.1 — (Nicotiana sylvestris)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn081281
- Capsicum annuum: CA03g18340
- Nicotiana benthamiana: Niben101Scf00595g03001.1, Niben101Scf06186g07017.1
- Nicotiana tabacum: XP_016505844.1, XP_016505843.1, XP_016505846.1, XP_016505845.1, XP_016501774.1, XP_016501773.1, XP_016501772.1, XP_016501771.1, XP_016501770.1, XP_016501769.1
- Prunus mume: XP_008234210.1
- Salvia miltiorrhiza: SMil_00003924-RA_Salv
- Solanum lycopersicum: Solyc03g025440.2.1
- Solanum melongena: Sme2.5_02276.1_g00005.1
- Solanum tuberosum: PGSC0003DMP400027705
- Vitis vinifera: GSVIVT01028908001
Sequences
CDS Sequence:
- >XP_009785120.1|Nicotiana_sylvestris|C2H2|XP_009785120.1
ATGTCGGTTGGAAAGCTCAGAATAGGTGCTACGCCAGCTGCAATGAAAGCCGATGAGGGAAATGATTCGCTTGATACTTTGATTAGGCAAGCCATAGGCAAGGAGCCTCTTTTTTCTTTTTCAAGAACAGGGGATGGTCCTGTCCAGTGGTTTCAACTGCTTCATGGTTTAGAGCAGCAAGATAATGCTGGTGGTTGGCCAATGCTAACACCGTTAAAACTTCAGAAGTGTGAAAAATGTTCTCGGGAATTTTATGCCCCTATAAATTATCGGAGACATATGCGTCTGCATCGTCGAGCTTTAAACTTTGATAAGGAATCTCGCAAATACAGGGATCTGCTGGGAGCATTTTGGGATAAGCTCTCAGTGGATGAGATTAAGGAAGTTGTATCGTTGCATGATGTTTCAATAAAGGTAAGTACCAGATTCACTTTACCTGTCCATGATGTTTCAATAAAGGACCTTGCTGGATCTTCACTTGTTAATGACCTGGCAACATCTCTGCAAAAGATGGCGATTTGGGCTCATCCTCAAGATTATTATGAGGCTGGTTTAGCTTTGTTGGAAGTCATCCAAGGTAAACCTTCCAAGCTTCCAATTACCTCTCAGGAATTATTTAGCATCCTTGATGATGCTAGCGAAACAACATTTTTATGTGCCGGCACAGCCGAGTCGGTGCAAAAATATGTTTTTGACGGGTATGCTGCCAAAAAAGGTCTCGAGTTTAAAAACTTGGTTGCTTGCGCTAGCTTCCTTTTTGAACAGAAACTGGTAAAAGCATGGTTCGCAGACAAAGATGCTGAAGCTATGAGATGCCAGAAGTTGCTTTTTGAGGAGGAAGAAGCTGCTCAAAAAAGACGAGCTGAGCTGTTGGAACGGAAAAAGCTGAAAAAGCTTAGGCAGAAGGAACAGAGAGCAAGAGAGCAATCAAATTGGGAAAGGGGAGATTTGGAGGTACCTGCTGATTCTTTTGAAGGTCCAATAGCAGAATCTTCTGTCCGTTCAGCGGCAGCATCTGAATCCAGTTCTAGTACTCCCCAAGTATCTGATGATATTTCCTCCTGCCTTGAACTTGTTCAATTCTCTAACAATGAAAATATGGACATTGAAGCCCAACTAAATATCTCTCATCCGCACCTGGATCTAGTTGAAATTCAGGATGTTGAGCCCCCTCCAGTGTCTGCAAATAGTCGACGGCATTTCCCCCACACCCAGTGGCAAGTCGCAAAATCACAACGAACAGGGAGAAATGGTTTTCGTAACAACCAGAATCATGAAGTACAGAATCTTGAACCAATACAGAAGCATGGAGTTATTAAAGACCGAGGTGCCCCTGTTAATGGCAGTAAGATTTGGACAAGAAAAATTAGAGTGCAAAATGGTGAGCGCTTAAGGCTGGATCCGCAGAAAGAGGCAATTGATCAAAATCAGAGGAACTGTGAAGTGATGATTGGTTCTATATCTGTTTCAATGAAAAATTGCAGCACACATGGACAGGGTAACTGTCCTGCTGTCGAAAGAGATAACTTTGAAAGCATAGAGCCAGCCATGCTACAAAAGTTAAATCATGTACAGAAGCCAGCAAAGCACGATGTTCTTCAGGGTGGGTCAAATGGAGCAGCTGTGAAGCTCTGGAGGCCTGTGAGCAGGCATGGAAGTGGACGACAAGATCCTGGAGAGGATGTGATCTCTGTAAAGTTGGACAATCGGACTTCCTCCACTGAAAATAATTTGCGATTATGCTCGAGGGACAACCCTACTGGCAAGACTAAGAATTACACATGTCAGGTTTCAGATGGAAATGTTCTTCAAGGTCTGGGATTTTGCAGTGTTTCTGCGAAAGCTTTTCTATCTCAGAGATGGAAGGAGGCAATCTCGGGAGATCATGTTAGATTAGTCCTTTCCGATGACATTGAGGTTTCAGGACAGTCCGACACGCAAAATGGCAGTTCAGAAGCAGCCCCGCGGTCAGCTGATCAGGACCATGGTATTCTTGTCAAAGCCGACAACCAGCAGGCAAATACTGGAGATCTTAGTTTTTCGTCCAATGGCAACAGTAAGGTTAAGTTTAGGCAGAAGCCTGATAAGTCTACTAAGATAAAGTGCATTCCAAAGCAAAAAAAACAAAAACAAAAACAAGCCTTAATTTAG
Protein Sequence:
- >XP_009785120.1|Nicotiana_sylvestris|C2H2|XP_009785120.1
MSVGKLRIGATPAAMKADEGNDSLDTLIRQAIGKEPLFSFSRTGDGPVQWFQLLHGLEQQDNAGGWPMLTPLKLQKCEKCSREFYAPINYRRHMRLHRRALNFDKESRKYRDLLGAFWDKLSVDEIKEVVSLHDVSIKVSTRFTLPVHDVSIKDLAGSSLVNDLATSLQKMAIWAHPQDYYEAGLALLEVIQGKPSKLPITSQELFSILDDASETTFLCAGTAESVQKYVFDGYAAKKGLEFKNLVACASFLFEQKLVKAWFADKDAEAMRCQKLLFEEEEAAQKRRAELLERKKLKKLRQKEQRAREQSNWERGDLEVPADSFEGPIAESSVRSAAASESSSSTPQVSDDISSCLELVQFSNNENMDIEAQLNISHPHLDLVEIQDVEPPPVSANSRRHFPHTQWQVAKSQRTGRNGFRNNQNHEVQNLEPIQKHGVIKDRGAPVNGSKIWTRKIRVQNGERLRLDPQKEAIDQNQRNCEVMIGSISVSMKNCSTHGQGNCPAVERDNFESIEPAMLQKLNHVQKPAKHDVLQGGSNGAAVKLWRPVSRHGSGRQDPGEDVISVKLDNRTSSTENNLRLCSRDNPTGKTKNYTCQVSDGNVLQGLGFCSVSAKAFLSQRWKEAISGDHVRLVLSDDIEVSGQSDTQNGSSEAAPRSADQDHGILVKADNQQANTGDLSFSSNGNSKVKFRQKPDKSTKIKCIPKQKKQKQKQALI