Information report for Vradi08g18690.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_014514562.1 — uncharacterized protein LOC106772577
- TrEMBL: A0A1S3V8N5 — A0A1S3V8N5_VIGRR; uncharacterized protein LOC106772577
- STRING: XP_007143440.1 — (Phaseolus vulgaris)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_07269, C.cajan_11305
- Cicer arietinum: XP_004496548.1, XP_004496547.1
- Glycine max: Glyma.10G233400.2.p, Glyma.10G233400.1.p, Glyma.20G161000.1.p, Glyma.10G233400.3.p, Glyma.16G181700.3.p, Glyma.16G181700.2.p, Glyma.16G181700.1.p
- Gossypium arboreum: Cotton_A_01293_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G2312
- Manihot esculenta: Manes.06G149800.1.p
- Prunus mume: XP_008234210.1
- Prunus persica: Prupe.2G297500.1.p
- Vitis vinifera: GSVIVT01028908001
Sequences
CDS Sequence:
- >Vradi08g18690.1|Vigna_radiata|C2H2|Vradi08g18690.1
ATGCCAGTTGCAAAACTACCGGCCTCAGGCACAACCGGTTTCACAAAAACAGATGATGGAAATGATTCTTTAGATACAATATTCAGACAAGCAATTGGAAAAGAACCGTTGCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTACAAAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCCATTAACTATAGAAGACATATACGTGTGCAGCACCGGTTGAAAAAGCTTGATAAGGATTCTAAAAAGAATAGGGAACTTTTAGGGGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTGTTTCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAGAAGCTTTGACAACTCTTAGAAAACAAGGATTTTCTTCTCTTCCGCAATACTATCTGAGGGCTGGTTCTGCCCTTTTGAATATTGTTCAATCCAGGCCATCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGTTGGATCAGCAGTGTCGATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACAAAAAAACCTAGTTGCTTGTACAAGTTTCTTGCTAGAGCAGAAACTGTTTACCCGTGGTCTACTCTCTGGCTTTAGGAATATTTCTAGATACAAGAATAGACTTAAAATGGACACAAAAGCTGAGATTTTAGAGAGGAAACGGCAGAAAAAGCTCAGACAGAAAGAACACAAGACAAAGGAGCAAATTGAAAACAACACAGAAACTAAAGGAAACATAAACAGCGCAGGCGAGGATGTATCACCAGGAGAAGCGTCTTTGGGTACACGTGACTTCGATGCACATAATCCAGATATTTTTGCGGATCATTCTCCTCCTCCACCACATGTAACTTCTCACTGCTTAGACGCTAATGATGTTATAGAAAAGGATACGCTGTCAGGGTATGATGATTGTGACACGGATCAGTATATAGAGCGGCAGACACTACCAGGACATAATCGCCGGGGCACAATGCCTGCCAGATGGCAAGGGCTACCAAAATCACAATGGGCTAGAGCCAATGGTTTGAATGCAGGCCAGAATTCTCAACCGACGAAGCTTGGAGTTATTCAAAAGCATAGAACCAGCCATGATCTTAGGGTAGCTCCTATAATCAATGGCAGTAAGGTTTGGAGTCGAAAACCTAAAGCAGAATCTAATGATTTGGTTCTAAAAAACAAACTGCTGAAAGAACCTGACAAAGTTAAAAATCATGAAGTTTTGATAGGATCTGTATCAGTTAGTCTGGGTAATTGTTGCCATTCCGGAGGTAACTTTATGGCACCCCAGCGGGATTGCTCGGCAGGGAATCTGTCCAAGCTGAATACTGCTCAGGAGAAACCAGGAAGCAACGGTCGTTTAACAGCTAAGTTTTGGAGGCCTGTTAGCCAGCATGGAACTAAAGACCCATTTCCACTTCAAAATGGTGGGACAGAAGCTGATGCTATAAATGGAAAAATTGATGAAAATTCGTCTGGTCAAAGTAGTTTAAGGTTGTGTAGTGTAGAGGGTAATGATGATATTGATTTTGGGGACAATTTTTCCCATAATGTGGCAAAAGTAGATACAGAAAGCTTACGTCTATCCAGCCATGCTGCAGAATCCTTTCTTGCCCAAAGATGGAAAGAAGCTATCTCGTCAGACCATGTAAAATTGGTTTTCACACCTGATTCTGAGCCTCCTGGAGGACAGTCTGTCCAGGATTGTGAACTAGCAGCAGATGCTTATCTATCTTCTGATGCGGACAAATGTGGCGTTCTTGCAAGTACAGAGAACCGGTTCCCTGCAACCTCTGGAGTAGCAAGATCTAAACCCAAAACGAAGCCTGAAAAAGGAATGAAGATAAAGTACATTCCCAAACAAAAAGCAGCAGCCTAG
Protein Sequence:
- >Vradi08g18690.1|Vigna_radiata|C2H2|Vradi08g18690.1
MPVAKLPASGTTGFTKTDDGNDSLDTIFRQAIGKEPLLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRVQHRLKKLDKDSKKNRELLGAYWDKLSIEEAKEVVSFKNVMLEEVPGSSILEALTTLRKQGFSSLPQYYLRAGSALLNIVQSRPSSFPISSQELFSILDDSSEKTFLVGSAVSMQRYVFDGEAGKIGLEQKNLVACTSFLLEQKLFTRGLLSGFRNISRYKNRLKMDTKAEILERKRQKKLRQKEHKTKEQIENNTETKGNINSAGEDVSPGEASLGTRDFDAHNPDIFADHSPPPPHVTSHCLDANDVIEKDTLSGYDDCDTDQYIERQTLPGHNRRGTMPARWQGLPKSQWARANGLNAGQNSQPTKLGVIQKHRTSHDLRVAPIINGSKVWSRKPKAESNDLVLKNKLLKEPDKVKNHEVLIGSVSVSLGNCCHSGGNFMAPQRDCSAGNLSKLNTAQEKPGSNGRLTAKFWRPVSQHGTKDPFPLQNGGTEADAINGKIDENSSGQSSLRLCSVEGNDDIDFGDNFSHNVAKVDTESLRLSSHAAESFLAQRWKEAISSDHVKLVFTPDSEPPGGQSVQDCELAADAYLSSDADKCGVLASTENRFPATSGVARSKPKTKPEKGMKIKYIPKQKAAA*