Information report for SMil_00003924-RA_Salv
Gene Details
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Functional Annotation
- Refseq: XP_011076143.1 — uncharacterized protein LOC105160463 isoform X1
- Refseq: XP_020548920.1 — uncharacterized protein LOC105160463 isoform X1
- TrEMBL: A0A4D9BG75 — A0A4D9BG75_SALSN; Uncharacterized protein
- STRING: Migut.F00325.1.p — (Erythranthe guttata)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn081281
- Gossypium hirsutum: Gh_D12G2446
- Manihot esculenta: Manes.06G149800.1.p
- Nicotiana tabacum: XP_016501774.1, XP_016501773.1, XP_016501772.1, XP_016501771.1, XP_016501770.1, XP_016501769.1
- Sesamum indicum: XP_011076143.1, XP_011084434.1, XP_011084433.1, XP_011076144.1, XP_011084435.1
- Vitis vinifera: GSVIVT01028908001
Sequences
CDS Sequence:
- >SMil_00003924-RA_Salv|Salvia_miltiorrhiza|C2H2|SMil_00003924-RA_Salv
ATGCCTGCTGCAAAGCTCTGCTCCAGCGGAACTCTCAATGCTATGAAATCAGAAGAAGGGAATGATTCCCTAGACACCTTCATCAGACAAGCTATAGGAAAGGAGCCTCTTCTCCCTTTTCCAAGGACAGTGGATAATCCAGTGCAGTGGATTCAATTGCTTCATGCCTTAGATCAACCAGATCTCCCAGGTTGGCCCTTGCTGACCCCTGTGAAAGTTCAGATGCAAAAGTGCGAGAAGTGTTCCCGGGAGTTCTGTTCTCCAATTAACTACAGAAGACATACTCGGGTGCACCGCCGCTCCTTAAATATCAACAAGGAATGGCACAAAAACAGGGATTTATTAGCTGCATTTTGGGATAAGCTGTCTTTGGAGCGGGCTAAGGAAGTAGTGTCATTTAATGACATAAAGCTTAAGGATATTGCTGGATCATCGGTAGTTAAAGGTTTGGCTTCCTCTCTCCGAAGACCAGGGGTTTGGACTCTTCCGCAGGCTTATGTGAAGGCTGGTGCCACACTGCTGGATATCATCCAAGCCAAGCCTTCCAGGCTACCGATATCCTCACAGGAACTGTTTAGCATCCTTGATGATGCCAGCGAGAGTACATTTCTGTGTGCCGGTACAGCTGAATCGGTGCAAAAGTACGTTTTTGATGGAGAAACTGCTAAAAATAGCCTTGAGTTGAAGAACCTGGTAGCGCTTGCTAGCTTCCTCTTTGAGCAACTACTGGTCAAGGCATGGATCGCGGACAAAGATGCAGAGGCTTTGAGATGTCAGAAGCTACTTGTGGAGGAGGAAGAAGCTGAACAGAAAAGGCAAGCAGTGATTCTGGAGAGGAAAAAACAGAAAAAGCTTCGTCAAAAAGAACAGAGGTTCAAGGAGCAATACTATGGGTGCAGCAGAGATTTGAATGTCTATGTTGATGCTGTAGATAGGCCTACTTCTGCTGAAGCCTCTGATCTGTCGTCCCCATCCGACTCCAACTCAAACTCAAACTCACAAGAGGTGCCTACAACCTTAGACTCTGTTCACCCCCAAAACAAAGAGGCAGATGAAGATATTGAAGTGCAGTTTGATGCTAGCAGTGAACAGAAGAAACAAGGGGACTCCCCATCTGTTGAACTCCAGATGGTGGTTGCCAATGGTCATCGGCATGTAGCCACCAACCGCTTGCAGGTTCCAAAGTCACAAAGGGGCAGCCGGTATGGCCTCCATGCAAACTTGAATCCTCAAACATTAAAACATGAACTTATGCACAAGCTTGGTTCATCCAAAGACCGAAGTCTACAGAATGGAAACAAAGTTTGGACCAAGAAACTCAAAAGTAACAATGATGGGGAAAACCTGAAGCCTCCTTTGCAAGAAGTGACCAGTCATCAGATCGAACAAAATAATGGTGAGGTGATTATTGGTTCTATACCTGTCACACTGAAAAGTTATGTTGATCAGCAGCAAGCAAGTCACCCGAATGAAACACAAGATACTTGCAGCACAGAGCATGCTGTGATTAAGAAGAAAAATGCTTCAGAAAAGCCTGTGAAATCCAATTATCTTCAGTCTAGCACCAACCGAGTGGCTTCAAGACTTTGGAGGCCTGTTAGCCGTGGTGAAACAAAGAACGTGCCACCTGTTGGTAGAAGCAATGAAGATCCCGGGGATAGTGCTATATTGAGTAAGGTTCATGACCATACTCCCTCCAATGAAAGATCTGGGCAGTCACAATCCTTGGACAATGATGGTTGTCATAATGGGAAGCAATTACATGTCGTCTTAGATGAAAATGCTCAACGAGGATTTGTGCCTTTCTCCAGTGAAGCTGCAAAAGAGTTTCTTGCCAGGAGATGGAAAGAAGCTATCTCAGGAGATCATGTAAAATTAGTGCTTTCATCGGGGCATGAACCTCCTGGACGCCCTGACGTTCAGCATGCATCAGATCCTCTCAGAAGCAATGCTCCTAACCATGGTGAGAACCAGTTTGGCAGAACCATTCAAGTTCACGCTGCTAGAAAGCTGGACAAGAATGTGAAATTCAAATACATACCGAAACAAAAAACTATTGCGTAG
Protein Sequence:
- >SMil_00003924-RA_Salv|Salvia_miltiorrhiza|C2H2|SMil_00003924-RA_Salv
MPAAKLCSSGTLNAMKSEEGNDSLDTFIRQAIGKEPLLPFPRTVDNPVQWIQLLHALDQPDLPGWPLLTPVKVQMQKCEKCSREFCSPINYRRHTRVHRRSLNINKEWHKNRDLLAAFWDKLSLERAKEVVSFNDIKLKDIAGSSVVKGLASSLRRPGVWTLPQAYVKAGATLLDIIQAKPSRLPISSQELFSILDDASESTFLCAGTAESVQKYVFDGETAKNSLELKNLVALASFLFEQLLVKAWIADKDAEALRCQKLLVEEEEAEQKRQAVILERKKQKKLRQKEQRFKEQYYGCSRDLNVYVDAVDRPTSAEASDLSSPSDSNSNSNSQEVPTTLDSVHPQNKEADEDIEVQFDASSEQKKQGDSPSVELQMVVANGHRHVATNRLQVPKSQRGSRYGLHANLNPQTLKHELMHKLGSSKDRSLQNGNKVWTKKLKSNNDGENLKPPLQEVTSHQIEQNNGEVIIGSIPVTLKSYVDQQQASHPNETQDTCSTEHAVIKKKNASEKPVKSNYLQSSTNRVASRLWRPVSRGETKNVPPVGRSNEDPGDSAILSKVHDHTPSNERSGQSQSLDNDGCHNGKQLHVVLDENAQRGFVPFSSEAAKEFLARRWKEAISGDHVKLVLSSGHEPPGRPDVQHASDPLRSNAPNHGENQFGRTIQVHAARKLDKNVKFKYIPKQKTIA