Information report for PH01000086G0580
Gene Details
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Functional Annotation
- Refseq: XP_006658739.1 — PREDICTED: protein indeterminate-domain 1-like, partial
- TrEMBL: A0A0D9X0T3 — A0A0D9X0T3_9ORYZ; Uncharacterized protein
- STRING: LPERR07G17330.1 — (Leersia perrieri)
- GO:0006886 — Biological Process — intracellular protein transport
- GO:0006897 — Biological Process — endocytosis
- GO:0005774 — Cellular Component — vacuolar membrane
- GO:0005794 — Cellular Component — Golgi apparatus
- GO:0005886 — Cellular Component — plasma membrane
- GO:0009506 — Cellular Component — plasmodesma
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PH01000086G0580|Phyllostachys_heterocycla|C2H2|PH01000086G0580
ATGCCGCCCAATCCGACGGAGCCGGAGCAGGCGGAGGCGGCGCCGGCGCCGGCGCCGGCCAAGAAGAAGCGGAACCTCCCCGGGACGCCAGGCGAGAGCACGCGCTTCGTTTTTTCTTTTGTGGGAGTGGGGGGGGGCATAGTGGTTGGTAAAGCTTGTATGGTCTATGTTGGTCTGATGTCGGGTTTGTGTGTGCTGTGCGCGTGCAGATCCGGACGCGGAGGTGATCGCGCTGTCGCCGGGGACGCTGATGGCGACGAACCGGTTCGTGTGCGAGGTGTGCGGGAAGGGGTTCCAGAGGGACCAGAACCTGCAGCTCCCGGGGCGGCGCCGCCGCGCCGGAGGGTCTACGTCTGCCCGGAGCCCGGCTGCGTGCACCACTCCCCAGCCCGCGCGCTCGGGGACCTCACCGGGATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGCTCTGGGCCTGCCCCCGCTGCGGCAAGCGCTACGCCGTCCAGGCCGACCTCAAGGCCCACGCCAAGACCTACGGCACCTGTGAGTACCGCTGCGACTGCGGCACCCTCTTCACCAGGTACTACTTTCCGCTTTCTTTCCCCTCAATTCCAATGGTCCCTTGGGGGCGAAAAAAGCTTGCATTCCTGTTTGATTCATCCGCCAGCGTGCTGGCTTGGTTCAGGAGGGACAGCTTCGTGACGCATCGCACTTTCAGCGGCACCCTCGTGGAGGAGACCGGCAGGGTGCTCGCGGTGCCGGCGCCGCCCTCGCCTCGGCCGCCTGATTTGGAGGCTGAGGAGAATGTGGACAAGGACAGGGAGAAGGGGGATGAGGAGGAGAATGAGAATTCTGCTGTGGCCGAGGAGCAGCAGCTTGTTGTGGCAGTGGTGCCAAATGTGGATGAGCCAGAGGTGGTTGCTGAGCCAACTGTGGATGCCAAACAAGAGGGAGCTGTCAACTTTGCTCTCATGATGTCACAAATGGAGGGGGGTTGTCCATTAGATTATAATACTATAACTGATCTCTTCCTTCAGGTTTTGGAGACAAACTTGGTAACTTACCCAAATGTTGCTGATGCCATCCTTGCTAACGGTATGTTCAGTCATTATGATCGCCCTCGTATTGCTCAGCTGTGTGAAAAGGGTGGCCTGTACTTGCGAGCCCTCCAGCATTACACAGAGTTACCTGATATCAAGCGTATCATTGTAAATACCCACGCCATTGAGCCACAGGCACTCGTTGAGTTCTTTTGCACCCTTTCAAGAGAATGGGCATTAGAGTGCATGAAGGACCTTCTACTGGTCAATTTGAGAGGAAATCTACAAATTGTTGTGCAGGCATCGCATGTCTACACAGACCTCCAAGACTCAAGAGCGCACTCTTGGCCGCCGGGTCAGCAACAGCTTGATCTCCAACACATAAGAAAGCATGCTGCAAGGCTGTGGAGAAAATTTGCCATTGACCAGATCTACAGCAAGCCATGGCCTCGAGAGCCAGAGGTGGTTGCTGAGCCAACTGTGGATGCCAAACATGAAGTGGAAGATGATCGAGATGAAGACGCTTGCTTCGACGAAGCTGATCCATATAAGGATGCTGAACTAGAGGACTCCAACCTGCCACACAACGATACTCCGATGCTTCCTTGTTTCCTGCCCCCTCCCTCGGAGGCCATTGGCATGGATGGCAGCAGCAGCAGTTGTGGTGCAGGCAGCAATGCTTCCAATTCCATCGCGCCAGCTACAACAAGCACATTTGCCGGTCTGTTTGCATCAGTCACAACAAGCACCACTCCCCAGAGTAGATCCCTTCGTGATCTTATCGGCGTTGATCCTACCTTCCTTTGCCTTGCGATTGGTGCGCCCTCCTCTCTGTTCCCACAGACAAACGCAAGCAACCCCTGCACCTTTGCTCCACCTCCAGCACCGCACATGTCCGCGACCGCACTCCTTCAGAAAGCTGCTGAGGTTGGAGCTTCGCAATCAAGCTCGTCTTTCTTGAAGGAGTTTGGGCTTGCCAGTTCGTCCTCCTCATCAACCCCATCCAAGCCACCTCAAGGAAGGTTCATCGATAACTCGCCACCATCCAAGCTACCTCAAGGAAGGTTCATCGATAACAGTGCACAGCAGTGGCACCGCCAGCATAATCAGCTAATGGAGATGGAGCCTGGGCCAATGCTATCTGGCGGTCTTGGCCTTGGCCTCGCCTATGACAGTGGGAATTCAGGGTTGCCGGATTTGATGATGGGGCCATCACCATTGTTCGGTCCCAAGCCTGCTACTCTGGACTTTCTTGGGCTTGGCATTGGAGGGACCATGGACGGCTCCACAGCCAATGGTGGCCTCCCGGCATTGATGGTTGGGGGAGAGCTGGATATGGGGTCTGCACAGGCGCCCTCTCCATGGGAGGAGGCCAAGACAAAGACCAATGGCCGCTCAATCCTGATTGTTTCGGAAAAAGAACAAGATGAGATAGGGACACACAGGGTGACATGGGAAAGTTATCAATCAGGTGCTTTGTCACAGCAGAAACTGCGTGAGAACCCTGCTGAGGTGATTTTTGGAGCTAACACCAAAAATTGCGTGTATGGCTACAGTTTGATCACCGATGAAACCAACGACACAAGACCGGTTCCATTCATTAGACATGTCAAGTTCCTCTCAGAAGAAACAGAAGAGATTGAACCTGTCAAGATTTCAGACCCAAGTCGTACAAATCTACAGTTTAGTTGGTCTGACATGACGAACGTCACCTAA
Protein Sequence:
- >PH01000086G0580|Phyllostachys_heterocycla|C2H2|PH01000086G0580
MPPNPTEPEQAEAAPAPAPAKKKRNLPGTPGESTRFVFSFVGVGGGIVVGKACMVYVGLMSGLCVLCACRSGRGGDRAVAGDADGDEPVRVRGVREGVPEGPEPAAPGAAPPRRRVYVCPEPGCVHHSPARALGDLTGIKKHFCRKHGEKLWACPRCGKRYAVQADLKAHAKTYGTCEYRCDCGTLFTRYYFPLSFPSIPMVPWGRKKLAFLFDSSASVLAWFRRDSFVTHRTFSGTLVEETGRVLAVPAPPSPRPPDLEAEENVDKDREKGDEEENENSAVAEEQQLVVAVVPNVDEPEVVAEPTVDAKQEGAVNFALMMSQMEGGCPLDYNTITDLFLQVLETNLVTYPNVADAILANGMFSHYDRPRIAQLCEKGGLYLRALQHYTELPDIKRIIVNTHAIEPQALVEFFCTLSREWALECMKDLLLVNLRGNLQIVVQASHVYTDLQDSRAHSWPPGQQQLDLQHIRKHAARLWRKFAIDQIYSKPWPREPEVVAEPTVDAKHEVEDDRDEDACFDEADPYKDAELEDSNLPHNDTPMLPCFLPPPSEAIGMDGSSSSCGAGSNASNSIAPATTSTFAGLFASVTTSTTPQSRSLRDLIGVDPTFLCLAIGAPSSLFPQTNASNPCTFAPPPAPHMSATALLQKAAEVGASQSSSSFLKEFGLASSSSSSTPSKPPQGRFIDNSPPSKLPQGRFIDNSAQQWHRQHNQLMEMEPGPMLSGGLGLGLAYDSGNSGLPDLMMGPSPLFGPKPATLDFLGLGIGGTMDGSTANGGLPALMVGGELDMGSAQAPSPWEEAKTKTNGRSILIVSEKEQDEIGTHRVTWESYQSGALSQQKLRENPAEVIFGANTKNCVYGYSLITDETNDTRPVPFIRHVKFLSEETEEIEPVKISDPSRTNLQFSWSDMTNVT*