Information report for Zm00001eb107730
Gene Details
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Functional Annotation
- Refseq: NP_001169281.1 — uncharacterized protein LOC100383144
- TrEMBL: C0PDI9 — C0PDI9_MAIZE; Protein indeterminate-domain 11
- STRING: Zm00001eb107730 — (Zea mays)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g18370.30.p, Bradi1g18370.29.p, Bradi1g18370.28.p, Bradi1g18370.27.p, Bradi1g18370.26.p, Bradi1g18370.25.p, Bradi1g18370.24.p
Sequences
CDS Sequence:
- >Zm00001eb107730|Zea_mays|C2H2|Zm00001eb107730
ATGCCGCACCCGACGGACCCGGAGGCGGGGTCCGAGCAGAAGGCGGAGGCGCCGGCGGTGCCTTTGGCGGCTGCGGCGCCGGCTCCGGTCAAGAAGAAGCGGAACCTCCCCGGGACGCCAGATCCGGACGCCGAGGTGATCGCGCTCTCGCCGGGGACGCTGCTGGCCACGAACCGCTTCGTGTGCGAGGTGTGCGGCAAGGGCTTCCAGCGGGACCAGAACCTGCAGCTGCACCGCCGTGGCCACAACCTGCCCTGGCGCCTGCGGCAGCGCGGCCCGGGCGCGCCGCCGCCGCGCCGCCGGGTGTACGTGTGCCCCGAGCCCGCCTGCGTGCACCACTCCCCCGCGCGGGCGCTCGGGGACCTCACCGGGATCAAGAAGCACTTCTGCCGCAAGCACGGGGAGAAGCGCTGGGCGTGCCCGCGCTGCGCCAAGCGATACGCCGTCCAGGCCGACCTCAAGGCGCACGCCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACGCTCTTCACCAGACGGGACAGCTTCGTGACGCATCGCGCCTTCTGCGGCGCCCTCGGGGAGGAGACCGGCAGGGTGCTGGCGCCACCAGCGCCGCCATCGCCTCGGCCGCCTGATTTGGAGGCTGACGAAAATGTTGCTGATTTGGAGGCTGACGAAAATGTTGACAAGGACAACGACAAGGAGGGGGAGGAGGAGAATGAGGATTCTGCCGTGGCCGAGGTGGAGGAGCCTCGGCGTGTGGAGGTGGTGCCAGAGGAGCCACAGCGCATTCCATCTCCACCTCCATTGCCGAAGGAGCCACCGTGCCGTCCGTCCCCACCTCCATTGCCGCAGGAGCAACTGTCCCCACCTCCGTCGCCAAAGGAGCCACCGTGCTGCCATCCGTCTCCACCTCCACTGCCAAAGGAGCCACAGCGGCTTCCATTTCCACCGGAGCAGCATGCAGTTGTGGTGGCATTGGTGCCAAATGTGGATGAGCCAGAGGTGGTTGCTGTGCCAAGTGTGACTGCCGAATTAGAGGATGAAACCGATCAAGACGAAGATGCCTGTTTCCAGGAAGCTGATCAGTACAAGGACTCGGAGCTTGAGGTCTCCAATCTGCTGGACAAGGACACCCCGATGCTTCCTTGCTTCCTCGCGTCGCCCTCGGAAGCCATTGGCACCGATGGAAGCGGCACAACAACCTGCGGCGCAGGTGGCAGCGTCTCCAATTCCATCGCGCCGTCTACAACCACCAACACCTTCGCCGGCCTCTTCGCGTCGGCCACAACAAGCACCACTTCCCACAGCACATCTCTGCGCGATCTCATCGGCGTCGATCCCACCTTCCTCTGCCTCGCGATCGGAGCGCCGTCTCTGTTCCCGCAGACGAGCGCGAGCAACTCAGGCACCTTCGCCCTGCTGCCGCCGGCGCCGCACATGTCCGCGACAGCGCTCCTGCAGAAGGCGACGGAGGCTGGAGCGACGCAGTCGAGCTCATCGTTCTTGAAGGAGTTTGGGCTGGCCTCTTCCTCCTCGTCGTCGTCGTCGCAACCTTCATCGAAGCAGGTGCCCCAAGGAAGGGTCGGCGCCGCCGATACCAGCGCGGAACCACCATGGCCGTACCGGAGTAACCAGCAAGTGGATATGGAGCGTCGCCAGAGTCATCAACGGAGGGAGATGGAGTCATGTTCGCAACAATGGCACCCCTCTAGTACCCAGCAAACGGAGATGGAGCGCCGCCACCGGAATCATCATCAAGAGAGGGAAATGGAGTCCAGTTCGCAACAATGGCACCGCCACCACCGGAACGACCGGCAGATGGGGTCGGAGAGCTACCGGAGTAATCAGCAAATGCAGATGGAGTCCAGCTCGCACCAATGGCTGCAACACAGAAGCTCTGAGCAAATGGTGGGGCGGCGGCACCACCTGGAGAGGGTGGAATCCAGGGGGATGCTGCTGTCTGGTGGTGGCCTTGGTCTGGGCCTCGCATACGAAAGTGGAAAATCAGGCTTGCCTGATCTGATGACGGGACCATCGCCATCGCCATCGCCACTGTTGGGTCCCAAGCCAGCCACGCTGGACTTCCTTGGGCTCGGCATCGGCGGGACCATGGTCGGCTCCACGGGCCTCCCGGCATTGGTGGCTGGAGGAGAGCTGGACATGGGGTCGTCGGCGCAGGTGCCTGCCCCATGGGACGACGCCCAGAGGAAGGCCAACGGCCGCACGATCCTGTGA
Protein Sequence:
- >Zm00001eb107730|Zea_mays|C2H2|Zm00001eb107730
MPHPTDPEAGSEQKAEAPAVPLAAAAPAPVKKKRNLPGTPDPDAEVIALSPGTLLATNRFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAPPPRRRVYVCPEPACVHHSPARALGDLTGIKKHFCRKHGEKRWACPRCAKRYAVQADLKAHAKTCGTREYRCDCGTLFTRRDSFVTHRAFCGALGEETGRVLAPPAPPSPRPPDLEADENVADLEADENVDKDNDKEGEEENEDSAVAEVEEPRRVEVVPEEPQRIPSPPPLPKEPPCRPSPPPLPQEQLSPPPSPKEPPCCHPSPPPLPKEPQRLPFPPEQHAVVVALVPNVDEPEVVAVPSVTAELEDETDQDEDACFQEADQYKDSELEVSNLLDKDTPMLPCFLASPSEAIGTDGSGTTTCGAGGSVSNSIAPSTTTNTFAGLFASATTSTTSHSTSLRDLIGVDPTFLCLAIGAPSLFPQTSASNSGTFALLPPAPHMSATALLQKATEAGATQSSSSFLKEFGLASSSSSSSSQPSSKQVPQGRVGAADTSAEPPWPYRSNQQVDMERRQSHQRREMESCSQQWHPSSTQQTEMERRHRNHHQEREMESSSQQWHRHHRNDRQMGSESYRSNQQMQMESSSHQWLQHRSSEQMVGRRHHLERVESRGMLLSGGGLGLGLAYESGKSGLPDLMTGPSPSPSPLLGPKPATLDFLGLGIGGTMVGSTGLPALVAGGELDMGSSAQVPAPWDDAQRKANGRTIL